RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TPM1P09493 284 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 RLBP1P12271 317 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 HCLS1P14317 486 aaPredicted RBP12.73□□□□□ -0.37
LINC00342-202ENST00000448494 IRX1P78414 480 aaPredicted RBP12.73□□□□□ -0.37
LINC00342-202ENST00000448494 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
LINC00342-202ENST00000448494 ARGLU1Q9NWB6 273 aaPredicted RBP12.73□□□□□ -0.37
LINC00342-202ENST00000448494 GPRASP1Q5JY77 1395 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 CUL7Q14999 1698 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 ERCC3P19447 782 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
LINC00342-202ENST00000448494 ZRSR1Q15695 479 aaKnown RBP12.73□□□□□ -0.37
LINC00342-202ENST00000448494 CASC1Q6TDU7 716 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 LEKR1Q6ZMV7 388 aa12.73□□□□□ -0.37
LINC00342-202ENST00000448494 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 ELP1O95163 1332 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 CTAGE5O15320 804 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 PTGS1P23219 599 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 USP8P40818 1118 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 EFCAB13Q8IY85 973 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
LINC00342-202ENST00000448494 REREQ9P2R6 1566 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 SMC2O95347 1197 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 ZC3H12AQ5D1E8 599 aaKnown RBP12.72□□□□□ -0.37
LINC00342-202ENST00000448494 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 UGGT2Q9NYU1 1516 aa12.72□□□□□ -0.37
LINC00342-202ENST00000448494 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
LINC00342-202ENST00000448494 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00342-202ENST00000448494 ARID4AP29374 1257 aaPredicted RBP12.71□□□□□ -0.37
LINC00342-202ENST00000448494 TMCO3Q6UWJ1 677 aa12.71□□□□□ -0.37
LINC00342-202ENST00000448494 REXO1L1PQ8IX06 675 aa12.71□□□□□ -0.37
LINC00342-202ENST00000448494 SPC24Q8NBT2 197 aa12.71□□□□□ -0.37
LINC00342-202ENST00000448494 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
LINC00342-202ENST00000448494 EHBP1L1Q8N3D4 1523 aa12.71□□□□□ -0.37
LINC00342-202ENST00000448494 DIP2BQ9P265 1576 aa12.71□□□□□ -0.38
LINC00342-202ENST00000448494 SGSM2O43147 1006 aa12.71□□□□□ -0.38
LINC00342-202ENST00000448494 ANAPC15P60006 121 aa12.71□□□□□ -0.38
LINC00342-202ENST00000448494 DNAAF4Q8WXU2 420 aa12.71□□□□□ -0.38
LINC00342-202ENST00000448494 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.71□□□□□ -0.38
LINC00342-202ENST00000448494 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.38
LINC00342-202ENST00000448494 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.38
LINC00342-202ENST00000448494 ATP10AO60312 1499 aa12.71□□□□□ -0.38
LINC00342-202ENST00000448494 ANKRD50Q9ULJ7 1429 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 SYNMO15061 1565 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 BRD1O95696 1058 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 MX1P20591 662 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 NUCB1Q02818 461 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 NYAP1Q6ZVC0 841 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 FILIP1Q7Z7B0 1213 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 MKRN1Q9UHC7 482 aaKnown RBP12.7□□□□□ -0.38
LINC00342-202ENST00000448494 PIK3C2GO75747 1445 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
LINC00342-202ENST00000448494 OAS2P29728 719 aaKnown RBP12.7□□□□□ -0.38
LINC00342-202ENST00000448494 JAKMIP3Q5VZ66 844 aa12.7□□□□□ -0.38
LINC00342-202ENST00000448494 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
LINC00342-202ENST00000448494 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 AP5Z1O43299 807 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 ST18O60284 1047 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 PPP2R1AP30153 589 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 TBC1D9Q6ZT07 1266 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 PAIP2Q9BPZ3 127 aaKnown RBP12.69□□□□□ -0.38
LINC00342-202ENST00000448494 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 A1CFQ9NQ94 594 aaKnown RBP12.69□□□□□ -0.38
LINC00342-202ENST00000448494 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
LINC00342-202ENST00000448494 IGF1RP08069 1367 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
LINC00342-202ENST00000448494 INHBEP58166 350 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
LINC00342-202ENST00000448494 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
LINC00342-202ENST00000448494 PLCB2Q00722 1185 aa12.68□□□□□ -0.38
LINC00342-202ENST00000448494 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
LINC00342-202ENST00000448494 ZGPATQ8N5A5 531 aaKnown RBP12.68□□□□□ -0.38
LINC00342-202ENST00000448494 ZNF428Q96B54 188 aa12.68□□□□□ -0.38
LINC00342-202ENST00000448494 MIEF2Q96C03 454 aa12.68□□□□□ -0.38
LINC00342-202ENST00000448494 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
LINC00342-202ENST00000448494 A0A087WUV0 522 aaPredicted RBP12.67□□□□□ -0.38
LINC00342-202ENST00000448494 APAF1O14727 1248 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
LINC00342-202ENST00000448494 FAM69CQ0P6D2 419 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 CCDC186Q7Z3E2 898 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 FAM107BQ9H098 131 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 L2HGDHQ9H9P8 463 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
LINC00342-202ENST00000448494 MAFGO15525 162 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 LMAN1P49257 510 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 TADA2BQ86TJ2 420 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 FMNL3Q8IVF7 1028 aa12.67□□□□□ -0.38
LINC00342-202ENST00000448494 NEMFO60524 1076 aa12.66□□□□□ -0.38
LINC00342-202ENST00000448494 SMC1AQ14683 1233 aaKnown RBP12.66□□□□□ -0.38
LINC00342-202ENST00000448494 NUCKS1Q9H1E3 243 aaKnown RBP12.66□□□□□ -0.38
LINC00342-202ENST00000448494 ADAM21Q9UKJ8 722 aa12.66□□□□□ -0.38
LINC00342-202ENST00000448494 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
LINC00342-202ENST00000448494 SCP2P22307 547 aa12.66□□□□□ -0.38
LINC00342-202ENST00000448494 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
LINC00342-202ENST00000448494 KCND1Q9NSA2 647 aa12.66□□□□□ -0.38
LINC00342-202ENST00000448494 PZPP20742 1482 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms