RNA–Protein interactions for RNA: ENST00000448361.5

COMMD3-203, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-203ENST00000448361 PPP1R1BQ9UD71 204 aaPredicted RBP19.02■□□□□ 0.64
COMMD3-203ENST00000448361 ATF5Q9Y2D1 282 aaPredicted RBP19.02■□□□□ 0.64
COMMD3-203ENST00000448361 CICQ96RK0 1608 aaPredicted RBP19.01■□□□□ 0.63
COMMD3-203ENST00000448361 COL5A3P25940 1745 aaPredicted RBP19.01■□□□□ 0.63
COMMD3-203ENST00000448361 TFCP2L1Q9NZI6 479 aa19.01■□□□□ 0.63
COMMD3-203ENST00000448361 ASAP1Q9ULH1 1129 aa19.01■□□□□ 0.63
COMMD3-203ENST00000448361 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
COMMD3-203ENST00000448361 MRC1P22897 1456 aa19■□□□□ 0.63
COMMD3-203ENST00000448361 LOC102724428A0A0B4J2F2 783 aa18.99■□□□□ 0.63
COMMD3-203ENST00000448361 HMOX1P09601 288 aa18.99■□□□□ 0.63
COMMD3-203ENST00000448361 SIK1P57059 783 aa18.99■□□□□ 0.63
COMMD3-203ENST00000448361 ATG3Q9NT62 314 aa18.99■□□□□ 0.63
COMMD3-203ENST00000448361 CNGB1Q14028 1251 aaPredicted RBP18.98■□□□□ 0.63
COMMD3-203ENST00000448361 AKAP4Q5JQC9 854 aa18.97■□□□□ 0.63
COMMD3-203ENST00000448361 MAP3K5Q99683 1374 aa18.96■□□□□ 0.63
COMMD3-203ENST00000448361 PPP2R1AP30153 589 aa18.96■□□□□ 0.63
COMMD3-203ENST00000448361 POTEHQ6S545 545 aa18.96■□□□□ 0.63
COMMD3-203ENST00000448361 COL23A1Q86Y22 540 aaPredicted RBP18.96■□□□□ 0.63
COMMD3-203ENST00000448361 TJP1Q07157 1748 aa18.95■□□□□ 0.62
COMMD3-203ENST00000448361 ITPK1Q13572 414 aa18.95■□□□□ 0.62
COMMD3-203ENST00000448361 LINC00116Q8NCU8 138 aa18.95■□□□□ 0.62
COMMD3-203ENST00000448361 CABP4P57796 275 aa18.94■□□□□ 0.62
COMMD3-203ENST00000448361 FLAD1Q8NFF5 587 aa18.94■□□□□ 0.62
COMMD3-203ENST00000448361 MTHFSDQ2M296 383 aaKnown RBP18.93■□□□□ 0.62
COMMD3-203ENST00000448361 AMIGO3Q86WK7 504 aa18.93■□□□□ 0.62
COMMD3-203ENST00000448361 CFAP53Q96M91 514 aa18.93■□□□□ 0.62
COMMD3-203ENST00000448361 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
COMMD3-203ENST00000448361 ARXQ96QS3 562 aa18.93■□□□□ 0.62
COMMD3-203ENST00000448361 SIPA1L3O60292 1781 aaPredicted RBP18.93■□□□□ 0.62
COMMD3-203ENST00000448361 UBR2Q8IWV8 1755 aa18.92■□□□□ 0.62
COMMD3-203ENST00000448361 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
COMMD3-203ENST00000448361 ATP6V1AP38606 617 aa18.92■□□□□ 0.62
COMMD3-203ENST00000448361 AK7Q96M32 723 aa18.92■□□□□ 0.62
COMMD3-203ENST00000448361 FHDC1Q9C0D6 1143 aaPredicted RBP18.92■□□□□ 0.62
COMMD3-203ENST00000448361 NFATC2IPQ8NCF5 419 aa18.91■□□□□ 0.62
COMMD3-203ENST00000448361 MYH14Q7Z406 1995 aaKnown RBP18.91■□□□□ 0.62
COMMD3-203ENST00000448361 RNMTO43148 476 aaKnown RBP18.9■□□□□ 0.62
COMMD3-203ENST00000448361 SSFA2P28290 1259 aa18.9■□□□□ 0.62
COMMD3-203ENST00000448361 SYT17Q9BSW7 474 aa18.9■□□□□ 0.62
COMMD3-203ENST00000448361 SLC52A2Q9HAB3 445 aa18.9■□□□□ 0.62
COMMD3-203ENST00000448361 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
COMMD3-203ENST00000448361 POLD1P28340 1107 aa18.89■□□□□ 0.61
COMMD3-203ENST00000448361 RSPH6AQ9H0K4 717 aa18.89■□□□□ 0.61
COMMD3-203ENST00000448361 KCPQ6ZWJ8 1503 aa18.89■□□□□ 0.61
COMMD3-203ENST00000448361 C4AP0C0L4 1744 aa18.88■□□□□ 0.61
COMMD3-203ENST00000448361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
COMMD3-203ENST00000448361 RBM42Q9BTD8 480 aaKnown RBP18.88■□□□□ 0.61
COMMD3-203ENST00000448361 CNTNAP4Q9C0A0 1308 aa18.88■□□□□ 0.61
COMMD3-203ENST00000448361 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
COMMD3-203ENST00000448361 GAS2L2Q8NHY3 880 aa18.87■□□□□ 0.61
COMMD3-203ENST00000448361 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
COMMD3-203ENST00000448361 GNPATO15228 680 aa18.86■□□□□ 0.61
COMMD3-203ENST00000448361 RC3H1Q5TC82 1133 aaKnown RBP18.86■□□□□ 0.61
COMMD3-203ENST00000448361 PHF14O94880 888 aa18.85■□□□□ 0.61
COMMD3-203ENST00000448361 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
COMMD3-203ENST00000448361 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
COMMD3-203ENST00000448361 PTCD1O75127 700 aaKnown RBP18.84■□□□□ 0.61
COMMD3-203ENST00000448361 MSL1Q68DK7 614 aa18.84■□□□□ 0.61
COMMD3-203ENST00000448361 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.61
COMMD3-203ENST00000448361 GNAT3A8MTJ3 354 aa18.83■□□□□ 0.6
COMMD3-203ENST00000448361 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
COMMD3-203ENST00000448361 FCHSD2O94868 740 aa18.82■□□□□ 0.6
COMMD3-203ENST00000448361 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
COMMD3-203ENST00000448361 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
COMMD3-203ENST00000448361 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
COMMD3-203ENST00000448361 RTCBQ9Y3I0 505 aaKnown RBP18.82■□□□□ 0.6
COMMD3-203ENST00000448361 DLG5Q8TDM6 1919 aa18.81■□□□□ 0.6
COMMD3-203ENST00000448361 RPS6KA4O75676 772 aa18.81■□□□□ 0.6
COMMD3-203ENST00000448361 CRKLP46109 303 aaKnown RBP18.8■□□□□ 0.6
COMMD3-203ENST00000448361 SLC39A6Q13433 755 aa18.8■□□□□ 0.6
COMMD3-203ENST00000448361 KIF13BQ9NQT8 1826 aa18.79■□□□□ 0.6
COMMD3-203ENST00000448361 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
COMMD3-203ENST00000448361 RALBP1Q15311 655 aa18.78■□□□□ 0.6
COMMD3-203ENST00000448361 TRAPPC3LQ5T215 181 aa18.78■□□□□ 0.6
COMMD3-203ENST00000448361 CHD4Q14839 1912 aa18.78■□□□□ 0.6
COMMD3-203ENST00000448361 TEFQ10587 303 aa18.77■□□□□ 0.6
COMMD3-203ENST00000448361 DNAJC10Q8IXB1 793 aa18.77■□□□□ 0.6
COMMD3-203ENST00000448361 VSIG10Q8N0Z9 540 aa18.77■□□□□ 0.6
COMMD3-203ENST00000448361 NLGN2Q8NFZ4 835 aa18.77■□□□□ 0.6
COMMD3-203ENST00000448361 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
COMMD3-203ENST00000448361 INTS5Q6P9B9 1019 aaKnown RBP18.76■□□□□ 0.59
COMMD3-203ENST00000448361 KLHL34Q8N239 644 aa18.76■□□□□ 0.59
COMMD3-203ENST00000448361 KIAA1551Q9HCM1 1747 aa18.75■□□□□ 0.59
COMMD3-203ENST00000448361 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
COMMD3-203ENST00000448361 CD2APQ9Y5K6 639 aa18.75■□□□□ 0.59
COMMD3-203ENST00000448361 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
COMMD3-203ENST00000448361 GYS1P13807 737 aa18.74■□□□□ 0.59
COMMD3-203ENST00000448361 ZNF790Q6PG37 636 aa18.74■□□□□ 0.59
COMMD3-203ENST00000448361 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
COMMD3-203ENST00000448361 HEG1Q9ULI3 1381 aa18.73■□□□□ 0.59
COMMD3-203ENST00000448361 HTATSF1O43719 755 aaKnown RBP18.73■□□□□ 0.59
COMMD3-203ENST00000448361 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
COMMD3-203ENST00000448361 NLGN1Q8N2Q7 840 aa18.73■□□□□ 0.59
COMMD3-203ENST00000448361 PLEKHF1Q96S99 279 aa18.73■□□□□ 0.59
COMMD3-203ENST00000448361 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
COMMD3-203ENST00000448361 MYBBP1AQ9BQG0 1328 aaKnown RBP18.73■□□□□ 0.59
COMMD3-203ENST00000448361 USP42Q9H9J4 1324 aaKnown RBP18.73■□□□□ 0.59
COMMD3-203ENST00000448361 RFC4P35249 363 aa18.72■□□□□ 0.59
COMMD3-203ENST00000448361 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
COMMD3-203ENST00000448361 ZNF496Q96IT1 587 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms