RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 DLG5Q8TDM6 1919 aa29.08■■■□□ 2.25
APOE-204ENST00000446996 PNISRQ8TF01 805 aaKnown RBP29.07■■■□□ 2.24
APOE-204ENST00000446996 PALLDQ8WX93 1383 aa29.07■■■□□ 2.24
APOE-204ENST00000446996 RTF1Q92541 710 aaKnown RBP29.07■■■□□ 2.24
APOE-204ENST00000446996 NBPF14Q5TI25 921 aa29.06■■■□□ 2.24
APOE-204ENST00000446996 ATG3Q9NT62 314 aa29.05■■■□□ 2.24
APOE-204ENST00000446996 ASAP1Q9ULH1 1129 aa29.04■■■□□ 2.24
APOE-204ENST00000446996 TEFQ10587 303 aa29.03■■■□□ 2.24
APOE-204ENST00000446996 DIEXFQ68CQ4 756 aaKnown RBP29.02■■■□□ 2.24
APOE-204ENST00000446996 SIPA1L3O60292 1781 aaPredicted RBP29.02■■■□□ 2.24
APOE-204ENST00000446996 TMPOP42166 694 aaKnown RBP29.01■■■□□ 2.23
APOE-204ENST00000446996 LRRC4BQ9NT99 713 aa29.01■■■□□ 2.23
APOE-204ENST00000446996 CCNL1Q9UK58 526 aaPredicted RBP29.01■■■□□ 2.23
APOE-204ENST00000446996 ZNF831Q5JPB2 1677 aa29.01■■■□□ 2.23
APOE-204ENST00000446996 LMOD3Q0VAK6 560 aa28.99■■■□□ 2.23
APOE-204ENST00000446996 CCDC146Q8IYE0 955 aa28.99■■■□□ 2.23
APOE-204ENST00000446996 PAPPAQ13219 1627 aa28.98■■■□□ 2.23
APOE-204ENST00000446996 LOC102724428A0A0B4J2F2 783 aa28.98■■■□□ 2.23
APOE-204ENST00000446996 CCER2I3L3R5 266 aa28.98■■■□□ 2.23
APOE-204ENST00000446996 SIK1P57059 783 aa28.98■■■□□ 2.23
APOE-204ENST00000446996 RIPK4P57078 832 aa28.98■■■□□ 2.23
APOE-204ENST00000446996 TAF1LQ8IZX4 1826 aa28.97■■■□□ 2.23
APOE-204ENST00000446996 MCM10Q7L590 875 aa28.96■■■□□ 2.23
APOE-204ENST00000446996 STK32BQ9NY57 414 aa28.95■■■□□ 2.22
APOE-204ENST00000446996 DCTN1Q14203 1278 aa28.93■■■□□ 2.22
APOE-204ENST00000446996 SLC15A2Q16348 729 aa28.93■■■□□ 2.22
APOE-204ENST00000446996 TAF7Q15545 349 aaPredicted RBP28.92■■■□□ 2.22
APOE-204ENST00000446996 C5P01031 1676 aa28.92■■■□□ 2.22
APOE-204ENST00000446996 CICQ96RK0 1608 aaPredicted RBP28.91■■■□□ 2.22
APOE-204ENST00000446996 ATP6V1AP38606 617 aa28.91■■■□□ 2.22
APOE-204ENST00000446996 NCBP3Q53F19 620 aaKnown RBP28.91■■■□□ 2.22
APOE-204ENST00000446996 AKT1S1Q96B36 256 aa28.91■■■□□ 2.22
APOE-204ENST00000446996 RBM42Q9BTD8 480 aaKnown RBP28.91■■■□□ 2.22
APOE-204ENST00000446996 ANO8Q9HCE9 1232 aaPredicted RBP28.91■■■□□ 2.22
APOE-204ENST00000446996 UBR2Q8IWV8 1755 aa28.9■■■□□ 2.22
APOE-204ENST00000446996 BTBD11A6QL63 1104 aa28.9■■■□□ 2.22
APOE-204ENST00000446996 ZNF790Q6PG37 636 aa28.9■■■□□ 2.22
APOE-204ENST00000446996 TTC5Q8N0Z6 440 aa28.9■■■□□ 2.22
APOE-204ENST00000446996 VSIG10Q8N0Z9 540 aa28.9■■■□□ 2.22
APOE-204ENST00000446996 APAF1O14727 1248 aa28.89■■■□□ 2.22
APOE-204ENST00000446996 KCNQ4P56696 695 aa28.89■■■□□ 2.22
APOE-204ENST00000446996 SLC39A6Q13433 755 aa28.89■■■□□ 2.22
APOE-204ENST00000446996 SLC4A9Q96Q91 983 aa28.89■■■□□ 2.22
APOE-204ENST00000446996 R3HDM1Q15032 1099 aaKnown RBP28.88■■■□□ 2.21
APOE-204ENST00000446996 QSER1Q2KHR3 1735 aa28.88■■■□□ 2.21
APOE-204ENST00000446996 PTCD1O75127 700 aaKnown RBP28.87■■■□□ 2.21
APOE-204ENST00000446996 BABAM1Q9NWV8 329 aa28.87■■■□□ 2.21
APOE-204ENST00000446996 TRIM35Q9UPQ4 493 aa28.87■■■□□ 2.21
APOE-204ENST00000446996 RRP7AQ9Y3A4 280 aaKnown RBP28.87■■■□□ 2.21
APOE-204ENST00000446996 KCPQ6ZWJ8 1503 aa28.87■■■□□ 2.21
APOE-204ENST00000446996 ITPK1Q13572 414 aa28.86■■■□□ 2.21
APOE-204ENST00000446996 NEUROD2Q15784 382 aa28.86■■■□□ 2.21
APOE-204ENST00000446996 ZNF827Q17R98 1081 aa28.85■■■□□ 2.21
APOE-204ENST00000446996 C4BP0C0L5 1744 aa28.85■■■□□ 2.21
APOE-204ENST00000446996 RC3H1Q5TC82 1133 aaKnown RBP28.84■■■□□ 2.21
APOE-204ENST00000446996 FAM9BQ8IZU0 186 aa28.84■■■□□ 2.21
APOE-204ENST00000446996 COL5A3P25940 1745 aaPredicted RBP28.83■■■□□ 2.21
APOE-204ENST00000446996 PSDA5PKW4 1024 aaPredicted RBP28.83■■■□□ 2.21
APOE-204ENST00000446996 LINC00116Q8NCU8 138 aa28.83■■■□□ 2.21
APOE-204ENST00000446996 CCDC27Q2M243 656 aa28.82■■■□□ 2.2
APOE-204ENST00000446996 FMNL2Q96PY5 1086 aa28.82■■■□□ 2.2
APOE-204ENST00000446996 THUMPD2Q9BTF0 503 aaKnown RBP28.82■■■□□ 2.2
APOE-204ENST00000446996 TJP1Q07157 1748 aa28.81■■■□□ 2.2
APOE-204ENST00000446996 HEG1Q9ULI3 1381 aa28.81■■■□□ 2.2
APOE-204ENST00000446996 NGEFQ8N5V2 710 aa28.81■■■□□ 2.2
APOE-204ENST00000446996 ZNF496Q96IT1 587 aaPredicted RBP28.81■■■□□ 2.2
APOE-204ENST00000446996 TEX13AQ9BXU3 409 aaPredicted RBP28.81■■■□□ 2.2
APOE-204ENST00000446996 TFCP2L1Q9NZI6 479 aa28.81■■■□□ 2.2
APOE-204ENST00000446996 KDM3BQ7LBC6 1761 aa28.8■■■□□ 2.2
APOE-204ENST00000446996 CNTNAP4Q9C0A0 1308 aa28.8■■■□□ 2.2
APOE-204ENST00000446996 FLAD1Q8NFF5 587 aa28.8■■■□□ 2.2
APOE-204ENST00000446996 LRP5O75197 1615 aa28.8■■■□□ 2.2
APOE-204ENST00000446996 MIER1Q8N108 512 aa28.79■■■□□ 2.2
APOE-204ENST00000446996 AK7Q96M32 723 aa28.79■■■□□ 2.2
APOE-204ENST00000446996 KCNQ3O43525 872 aa28.78■■■□□ 2.2
APOE-204ENST00000446996 CALD1Q05682 793 aaKnown RBP28.78■■■□□ 2.2
APOE-204ENST00000446996 TUBGCP6Q96RT7 1819 aa28.78■■■□□ 2.2
APOE-204ENST00000446996 UBR3Q6ZT12 1888 aa28.77■■■□□ 2.2
APOE-204ENST00000446996 CASZ1Q86V15 1759 aa28.77■■■□□ 2.2
APOE-204ENST00000446996 DNAJC10Q8IXB1 793 aa28.76■■■□□ 2.19
APOE-204ENST00000446996 MYH14Q7Z406 1995 aaKnown RBP28.75■■■□□ 2.19
APOE-204ENST00000446996 PNPLA7Q6ZV29 1317 aa28.75■■■□□ 2.19
APOE-204ENST00000446996 SLC16A10Q8TF71 515 aa28.75■■■□□ 2.19
APOE-204ENST00000446996 CHL1O00533 1208 aa28.74■■■□□ 2.19
APOE-204ENST00000446996 SSFA2P28290 1259 aa28.74■■■□□ 2.19
APOE-204ENST00000446996 MIS18AQ9NYP9 233 aa28.74■■■□□ 2.19
APOE-204ENST00000446996 RPS6KA4O75676 772 aa28.73■■■□□ 2.19
APOE-204ENST00000446996 STARD3NLO95772 234 aa28.73■■■□□ 2.19
APOE-204ENST00000446996 SNRPA1P09661 255 aaKnown RBP28.73■■■□□ 2.19
APOE-204ENST00000446996 CYP19A1P11511 503 aaPredicted RBP28.73■■■□□ 2.19
APOE-204ENST00000446996 CFAP44Q96MT7 982 aa28.73■■■□□ 2.19
APOE-204ENST00000446996 TSPYL4Q9UJ04 414 aa28.73■■■□□ 2.19
APOE-204ENST00000446996 CRKLP46109 303 aaKnown RBP28.72■■■□□ 2.19
APOE-204ENST00000446996 EIF4A1P60842 406 aaKnown RBP28.72■■■□□ 2.19
APOE-204ENST00000446996 ADRA2BP18089 450 aa28.71■■■□□ 2.19
APOE-204ENST00000446996 RTCBQ9Y3I0 505 aaKnown RBP28.71■■■□□ 2.19
APOE-204ENST00000446996 GNPATO15228 680 aa28.7■■■□□ 2.18
APOE-204ENST00000446996 ZNF853P0CG23 659 aa28.7■■■□□ 2.18
APOE-204ENST00000446996 WWC1Q8IX03 1113 aa28.7■■■□□ 2.18
APOE-204ENST00000446996 CCDC87Q9NVE4 849 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms