RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 CABP4P57796 275 aa21.07■□□□□ 0.96
HMGB2-203ENST00000446922 ZNF831Q5JPB2 1677 aa21.06■□□□□ 0.96
HMGB2-203ENST00000446922 DIAPH1O60610 1272 aaKnown RBP21.06■□□□□ 0.96
HMGB2-203ENST00000446922 CC2D1BQ5T0F9 858 aaKnown RBP21.06■□□□□ 0.96
HMGB2-203ENST00000446922 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
HMGB2-203ENST00000446922 RC3H1Q5TC82 1133 aaKnown RBP21.04■□□□□ 0.96
HMGB2-203ENST00000446922 LINC00116Q8NCU8 138 aa21.04■□□□□ 0.96
HMGB2-203ENST00000446922 KDM6AO15550 1401 aaPredicted RBP21.04■□□□□ 0.96
HMGB2-203ENST00000446922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.03■□□□□ 0.96
HMGB2-203ENST00000446922 ITPK1Q13572 414 aa21.03■□□□□ 0.96
HMGB2-203ENST00000446922 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
HMGB2-203ENST00000446922 CD2APQ9Y5K6 639 aa21.01■□□□□ 0.95
HMGB2-203ENST00000446922 NFATC2IPQ8NCF5 419 aa21■□□□□ 0.95
HMGB2-203ENST00000446922 RBM42Q9BTD8 480 aaKnown RBP21■□□□□ 0.95
HMGB2-203ENST00000446922 GNPATO15228 680 aa20.99■□□□□ 0.95
HMGB2-203ENST00000446922 GPR162Q16538 588 aa20.98■□□□□ 0.95
HMGB2-203ENST00000446922 SLC4A9Q96Q91 983 aa20.98■□□□□ 0.95
HMGB2-203ENST00000446922 RTCBQ9Y3I0 505 aaKnown RBP20.98■□□□□ 0.95
HMGB2-203ENST00000446922 CNTNAP4Q9C0A0 1308 aa20.98■□□□□ 0.95
HMGB2-203ENST00000446922 PHF14O94880 888 aa20.97■□□□□ 0.95
HMGB2-203ENST00000446922 HMOX1P09601 288 aa20.97■□□□□ 0.95
HMGB2-203ENST00000446922 MSL1Q68DK7 614 aa20.97■□□□□ 0.95
HMGB2-203ENST00000446922 AMIGO3Q86WK7 504 aa20.97■□□□□ 0.95
HMGB2-203ENST00000446922 KLHL34Q8N239 644 aa20.97■□□□□ 0.95
HMGB2-203ENST00000446922 RPS6KA4O75676 772 aa20.96■□□□□ 0.95
HMGB2-203ENST00000446922 TRAPPC3LQ5T215 181 aa20.96■□□□□ 0.95
HMGB2-203ENST00000446922 SLC52A2Q9HAB3 445 aa20.96■□□□□ 0.95
HMGB2-203ENST00000446922 SCN11AQ9UI33 1791 aa20.95■□□□□ 0.94
HMGB2-203ENST00000446922 RNMTO43148 476 aaKnown RBP20.95■□□□□ 0.94
HMGB2-203ENST00000446922 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
HMGB2-203ENST00000446922 GRIN3BO60391 1043 aa20.94■□□□□ 0.94
HMGB2-203ENST00000446922 MTHFSDQ2M296 383 aaKnown RBP20.94■□□□□ 0.94
HMGB2-203ENST00000446922 NLGN1Q8N2Q7 840 aa20.94■□□□□ 0.94
HMGB2-203ENST00000446922 NLGN2Q8NFZ4 835 aa20.94■□□□□ 0.94
HMGB2-203ENST00000446922 UTRNP46939 3433 aa20.94■□□□□ 0.94
HMGB2-203ENST00000446922 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
HMGB2-203ENST00000446922 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
HMGB2-203ENST00000446922 LGR6Q9HBX8 967 aa20.92■□□□□ 0.94
HMGB2-203ENST00000446922 CHD4Q14839 1912 aa20.92■□□□□ 0.94
HMGB2-203ENST00000446922 MRC1P22897 1456 aa20.91■□□□□ 0.94
HMGB2-203ENST00000446922 COL5A3P25940 1745 aaPredicted RBP20.91■□□□□ 0.94
HMGB2-203ENST00000446922 GAS2L2Q8NHY3 880 aa20.91■□□□□ 0.94
HMGB2-203ENST00000446922 ARHGEF1Q92888 912 aaKnown RBP20.91■□□□□ 0.94
HMGB2-203ENST00000446922 CICQ96RK0 1608 aaPredicted RBP20.91■□□□□ 0.94
HMGB2-203ENST00000446922 NUDCQ9Y266 331 aa20.91■□□□□ 0.94
HMGB2-203ENST00000446922 ADAMTS7Q9UKP4 1686 aa20.9■□□□□ 0.94
HMGB2-203ENST00000446922 U2SURPO15042 1029 aaKnown RBP20.9■□□□□ 0.94
HMGB2-203ENST00000446922 SMIM5Q71RC9 77 aa20.9■□□□□ 0.94
HMGB2-203ENST00000446922 RFC4P35249 363 aa20.89■□□□□ 0.93
HMGB2-203ENST00000446922 VSIG10Q8N0Z9 540 aa20.89■□□□□ 0.93
HMGB2-203ENST00000446922 GNAT3A8MTJ3 354 aa20.88■□□□□ 0.93
HMGB2-203ENST00000446922 CRKLP46109 303 aaKnown RBP20.88■□□□□ 0.93
HMGB2-203ENST00000446922 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
HMGB2-203ENST00000446922 PPP2R1AP30153 589 aa20.86■□□□□ 0.93
HMGB2-203ENST00000446922 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
HMGB2-203ENST00000446922 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
HMGB2-203ENST00000446922 MMP10P09238 476 aa20.85■□□□□ 0.93
HMGB2-203ENST00000446922 GYS1P13807 737 aa20.85■□□□□ 0.93
HMGB2-203ENST00000446922 ZNF784Q8NCA9 323 aaPredicted RBP20.85■□□□□ 0.93
HMGB2-203ENST00000446922 FCHSD2O94868 740 aa20.84■□□□□ 0.93
HMGB2-203ENST00000446922 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.932e-29■□□□□ 10.8
HMGB2-203ENST00000446922 TGFB2P61812 414 aa20.84■□□□□ 0.93
HMGB2-203ENST00000446922 INTS5Q6P9B9 1019 aaKnown RBP20.84■□□□□ 0.93
HMGB2-203ENST00000446922 MYH14Q7Z406 1995 aaKnown RBP20.84■□□□□ 0.93
HMGB2-203ENST00000446922 TEFQ10587 303 aa20.83■□□□□ 0.93
HMGB2-203ENST00000446922 RSPH6AQ9H0K4 717 aa20.83■□□□□ 0.93
HMGB2-203ENST00000446922 CCDC87Q9NVE4 849 aa20.83■□□□□ 0.93
HMGB2-203ENST00000446922 TJP1Q07157 1748 aa20.82■□□□□ 0.92
HMGB2-203ENST00000446922 CYP19A1P11511 503 aaPredicted RBP20.82■□□□□ 0.92
HMGB2-203ENST00000446922 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
HMGB2-203ENST00000446922 TEX13AQ9BXU3 409 aaPredicted RBP20.82■□□□□ 0.92
HMGB2-203ENST00000446922 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
HMGB2-203ENST00000446922 SLC39A6Q13433 755 aa20.81■□□□□ 0.92
HMGB2-203ENST00000446922 DNAJC10Q8IXB1 793 aa20.81■□□□□ 0.92
HMGB2-203ENST00000446922 TTC5Q8N0Z6 440 aa20.81■□□□□ 0.92
HMGB2-203ENST00000446922 PARP3Q9Y6F1 533 aa20.81■□□□□ 0.92
HMGB2-203ENST00000446922 USP42Q9H9J4 1324 aaKnown RBP20.8■□□□□ 0.92
HMGB2-203ENST00000446922 KCPQ6ZWJ8 1503 aa20.8■□□□□ 0.92
HMGB2-203ENST00000446922 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
HMGB2-203ENST00000446922 CEMIPQ8WUJ3 1361 aa20.8■□□□□ 0.92
HMGB2-203ENST00000446922 STARD3NLO95772 234 aa20.79■□□□□ 0.92
HMGB2-203ENST00000446922 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
HMGB2-203ENST00000446922 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.924e-7■□□□□ 8.9
HMGB2-203ENST00000446922 HTATSF1O43719 755 aaKnown RBP20.78■□□□□ 0.92
HMGB2-203ENST00000446922 ZPR1O75312 459 aa20.78■□□□□ 0.92
HMGB2-203ENST00000446922 ZNF790Q6PG37 636 aa20.78■□□□□ 0.92
HMGB2-203ENST00000446922 PIAS4Q8N2W9 510 aaPredicted RBP20.78■□□□□ 0.92
HMGB2-203ENST00000446922 PHACTR3Q96KR7 559 aa20.78■□□□□ 0.92
HMGB2-203ENST00000446922 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
HMGB2-203ENST00000446922 SOS1Q07889 1333 aaPredicted RBP20.78■□□□□ 0.92
HMGB2-203ENST00000446922 C4AP0C0L4 1744 aa20.76■□□□□ 0.91
HMGB2-203ENST00000446922 TM4SF1P30408 202 aa20.76■□□□□ 0.91
HMGB2-203ENST00000446922 NARFQ9UHQ1 456 aa20.76■□□□□ 0.91
HMGB2-203ENST00000446922 UBR2Q8IWV8 1755 aa20.76■□□□□ 0.91
HMGB2-203ENST00000446922 C10orf71Q711Q0 1435 aa20.76■□□□□ 0.91
HMGB2-203ENST00000446922 HEG1Q9ULI3 1381 aa20.74■□□□□ 0.91
HMGB2-203ENST00000446922 FKBP8Q14318 412 aa20.74■□□□□ 0.91
HMGB2-203ENST00000446922 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
HMGB2-203ENST00000446922 FMNL2Q96PY5 1086 aa20.74■□□□□ 0.91
HMGB2-203ENST00000446922 SRP68Q9UHB9 627 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms