RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 BCS1LQ9Y276 419 aa32.88■■■□□ 2.85
NUP50-211ENST00000445721 PXDNLA1KZ92 1463 aa32.87■■■□□ 2.85
NUP50-211ENST00000445721 A0A0G2JLW4 131 aa32.87■■■□□ 2.85
NUP50-211ENST00000445721 TRAPPC3LQ5T215 181 aa32.87■■■□□ 2.85
NUP50-211ENST00000445721 TGFB2P61812 414 aa32.86■■■□□ 2.85
NUP50-211ENST00000445721 NLGN1Q8N2Q7 840 aa32.86■■■□□ 2.85
NUP50-211ENST00000445721 RTCBQ9Y3I0 505 aaKnown RBP32.86■■■□□ 2.85
NUP50-211ENST00000445721 CICQ96RK0 1608 aaPredicted RBP32.85■■■□□ 2.85
NUP50-211ENST00000445721 APLP1P51693 650 aa32.85■■■□□ 2.85
NUP50-211ENST00000445721 ARHGAP27Q6ZUM4 889 aa32.84■■■□□ 2.85
NUP50-211ENST00000445721 TOMM70O94826 608 aa32.82■■■□□ 2.84
NUP50-211ENST00000445721 RBM42Q9BTD8 480 aaKnown RBP32.82■■■□□ 2.84
NUP50-211ENST00000445721 POLKQ9UBT6 870 aa32.82■■■□□ 2.84
NUP50-211ENST00000445721 N4BP2Q86UW6 1770 aaPredicted RBP32.81■■■□□ 2.84
NUP50-211ENST00000445721 ARHGEF1Q92888 912 aaKnown RBP32.8■■■□□ 2.84
NUP50-211ENST00000445721 SLC4A9Q96Q91 983 aa32.8■■■□□ 2.84
NUP50-211ENST00000445721 DPEP1P16444 411 aa32.79■■■□□ 2.84
NUP50-211ENST00000445721 CCDC87Q9NVE4 849 aa32.79■■■□□ 2.84
NUP50-211ENST00000445721 ANKRD26Q9UPS8 1709 aa32.79■■■□□ 2.84
NUP50-211ENST00000445721 KIF13BQ9NQT8 1826 aa32.79■■■□□ 2.84
NUP50-211ENST00000445721 FCHSD2O94868 740 aa32.78■■■□□ 2.84
NUP50-211ENST00000445721 KDRP35968 1356 aa32.78■■■□□ 2.84
NUP50-211ENST00000445721 C10orf71Q711Q0 1435 aa32.77■■■□□ 2.84
NUP50-211ENST00000445721 EIF4A2Q14240 407 aaKnown RBP32.77■■■□□ 2.84
NUP50-211ENST00000445721 RC3H1Q5TC82 1133 aaKnown RBP32.77■■■□□ 2.84
NUP50-211ENST00000445721 NMRK2Q9NPI5 230 aa32.77■■■□□ 2.84
NUP50-211ENST00000445721 KIAA1551Q9HCM1 1747 aa32.77■■■□□ 2.84
NUP50-211ENST00000445721 ERVV-2B6SEH9 535 aa32.76■■■□□ 2.83
NUP50-211ENST00000445721 ADRA2BP18089 450 aa32.76■■■□□ 2.83
NUP50-211ENST00000445721 RFC4P35249 363 aa32.76■■■□□ 2.83
NUP50-211ENST00000445721 DNAJC5GQ8N7S2 189 aa32.76■■■□□ 2.83
NUP50-211ENST00000445721 PARP3Q9Y6F1 533 aa32.76■■■□□ 2.83
NUP50-211ENST00000445721 GYS1P13807 737 aa32.75■■■□□ 2.83
NUP50-211ENST00000445721 TNNT2P45379 298 aaPredicted RBP32.75■■■□□ 2.83
NUP50-211ENST00000445721 RPS6KA4O75676 772 aa32.73■■■□□ 2.83
NUP50-211ENST00000445721 CNTNAP4Q9C0A0 1308 aa32.72■■■□□ 2.83
NUP50-211ENST00000445721 HSP90AB1P08238 724 aaKnown RBP32.71■■■□□ 2.83
NUP50-211ENST00000445721 DCAF5Q96JK2 942 aa32.71■■■□□ 2.83
NUP50-211ENST00000445721 C9orf131Q5VYM1 1079 aa32.7■■■□□ 2.83
NUP50-211ENST00000445721 C4AP0C0L4 1744 aa32.68■■■□□ 2.82
NUP50-211ENST00000445721 KCNA3P22001 575 aa32.68■■■□□ 2.82
NUP50-211ENST00000445721 CABP4P57796 275 aa32.68■■■□□ 2.82
NUP50-211ENST00000445721 PLEKHO1Q53GL0 409 aaPredicted RBP32.67■■■□□ 2.82
NUP50-211ENST00000445721 PLEKHG2Q9H7P9 1386 aa32.67■■■□□ 2.82
NUP50-211ENST00000445721 ZNF530Q6P9A1 599 aaPredicted RBP32.66■■■□□ 2.82
NUP50-211ENST00000445721 C16orf71Q8IYS4 520 aaPredicted RBP32.66■■■□□ 2.82
NUP50-211ENST00000445721 RBM46Q8TBY0 533 aaKnown RBP32.66■■■□□ 2.82
NUP50-211ENST00000445721 POLR3GLQ9BT43 218 aa32.66■■■□□ 2.82
NUP50-211ENST00000445721 PIM2Q9P1W9 311 aa32.66■■■□□ 2.82
NUP50-211ENST00000445721 ZNF831Q5JPB2 1677 aa32.65■■■□□ 2.82
NUP50-211ENST00000445721 PTCD1O75127 700 aaKnown RBP32.64■■■□□ 2.82
NUP50-211ENST00000445721 COL5A3P25940 1745 aaPredicted RBP32.63■■■□□ 2.81
NUP50-211ENST00000445721 MYH14Q7Z406 1995 aaKnown RBP32.62■■■□□ 2.81
NUP50-211ENST00000445721 DALRD3Q5D0E6 543 aaKnown RBP32.62■■■□□ 2.81
NUP50-211ENST00000445721 SRP68Q9UHB9 627 aaKnown RBP32.62■■■□□ 2.81
NUP50-211ENST00000445721 KDM6AO15550 1401 aaPredicted RBP32.61■■■□□ 2.81
NUP50-211ENST00000445721 BRCA1P38398 1863 aaKnown RBP32.61■■■□□ 2.81
NUP50-211ENST00000445721 CRKLP46109 303 aaKnown RBP32.61■■■□□ 2.81
NUP50-211ENST00000445721 MTHFSP49914 203 aa32.6■■■□□ 2.81
NUP50-211ENST00000445721 HTRA3P83110 453 aa32.6■■■□□ 2.81
NUP50-211ENST00000445721 FKBP8Q14318 412 aa32.6■■■□□ 2.81
NUP50-211ENST00000445721 AMOTQ4VCS5 1084 aa32.6■■■□□ 2.81
NUP50-211ENST00000445721 RNF181Q9P0P0 153 aa32.59■■■□□ 2.81
NUP50-211ENST00000445721 KDM2BQ8NHM5 1336 aa32.57■■■□□ 2.8
NUP50-211ENST00000445721 DDR1Q08345 913 aa32.57■■■□□ 2.8
NUP50-211ENST00000445721 NFATC2IPQ8NCF5 419 aa32.57■■■□□ 2.8
NUP50-211ENST00000445721 ARFGEF1Q9Y6D6 1849 aa32.56■■■□□ 2.8
NUP50-211ENST00000445721 FSTL1Q12841 308 aa32.56■■■□□ 2.8
NUP50-211ENST00000445721 C1orf141Q5JVX7 400 aa32.56■■■□□ 2.8
NUP50-211ENST00000445721 USP42Q9H9J4 1324 aaKnown RBP32.55■■■□□ 2.8
NUP50-211ENST00000445721 WDR90Q96KV7 1748 aa32.55■■■□□ 2.8
NUP50-211ENST00000445721 CHRNA5P30532 468 aa32.55■■■□□ 2.8
NUP50-211ENST00000445721 KLRG1Q96E93 195 aa32.55■■■□□ 2.8
NUP50-211ENST00000445721 KCPQ6ZWJ8 1503 aa32.55■■■□□ 2.8
NUP50-211ENST00000445721 RRAGCQ9HB90 399 aa32.54■■■□□ 2.8
NUP50-211ENST00000445721 AEBP1Q8IUX7 1158 aa32.53■■■□□ 2.8
NUP50-211ENST00000445721 POLRMTO00411 1230 aaKnown RBP32.49■■■□□ 2.79
NUP50-211ENST00000445721 INTS5Q6P9B9 1019 aaKnown RBP32.49■■■□□ 2.79
NUP50-211ENST00000445721 JMYQ8N9B5 988 aa32.49■■■□□ 2.79
NUP50-211ENST00000445721 TM4SF1P30408 202 aa32.48■■■□□ 2.79
NUP50-211ENST00000445721 COL13A1Q5TAT6 717 aaPredicted RBP32.47■■■□□ 2.79
NUP50-211ENST00000445721 PANK3Q9H999 370 aa32.47■■■□□ 2.79
NUP50-211ENST00000445721 ZPR1O75312 459 aa32.46■■■□□ 2.79
NUP50-211ENST00000445721 SULT6B1Q6IMI4 303 aa32.46■■■□□ 2.79
NUP50-211ENST00000445721 USPL1Q5W0Q7 1092 aa32.44■■■□□ 2.78
NUP50-211ENST00000445721 DNAJC10Q8IXB1 793 aa32.43■■■□□ 2.78
NUP50-211ENST00000445721 SMC1BQ8NDV3 1235 aa32.43■■■□□ 2.78
NUP50-211ENST00000445721 TJP1Q07157 1748 aa32.43■■■□□ 2.78
NUP50-211ENST00000445721 MORC1Q86VD1 984 aa32.42■■■□□ 2.78
NUP50-211ENST00000445721 SBF1O95248 1867 aa32.42■■■□□ 2.78
NUP50-211ENST00000445721 RASSF7Q02833 373 aa32.41■■■□□ 2.78
NUP50-211ENST00000445721 TIMELESSQ9UNS1 1208 aa32.41■■■□□ 2.78
NUP50-211ENST00000445721 PCNTO95613 3336 aa32.39■■■□□ 2.78
NUP50-211ENST00000445721 SOS1Q07889 1333 aaPredicted RBP32.38■■■□□ 2.77
NUP50-211ENST00000445721 TNRC6CQ9HCJ0 1690 aaKnown RBP32.37■■■□□ 2.77
NUP50-211ENST00000445721 NFIXQ14938 502 aa32.37■■■□□ 2.77
NUP50-211ENST00000445721 CAPN15O75808 1086 aa32.36■■■□□ 2.77
NUP50-211ENST00000445721 CYP19A1P11511 503 aaPredicted RBP32.36■■■□□ 2.77
NUP50-211ENST00000445721 AKAP4Q5JQC9 854 aa32.36■■■□□ 2.77
NUP50-211ENST00000445721 SLC52A2Q9HAB3 445 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms