RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 GOLIM4O00461 696 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
RIF1-205ENST00000444746 PCDHB15Q9Y5E8 787 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 ENOX2Q16206 610 aaKnown RBP9.46□□□□□ -0.89
RIF1-205ENST00000444746 ADGRL1O94910 1474 aa9.46□□□□□ -0.89
RIF1-205ENST00000444746 DNAAF4Q8WXU2 420 aa9.46□□□□□ -0.89
RIF1-205ENST00000444746 JAG2Q9Y219 1238 aa9.46□□□□□ -0.89
RIF1-205ENST00000444746 RPAP2Q8IXW5 612 aaPredicted RBP9.46□□□□□ -0.89
RIF1-205ENST00000444746 BIN1O00499 593 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 FLIIQ13045 1269 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 ANKRD24Q8TF21 1146 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 ZNF396Q96N95 335 aaPredicted RBP9.46□□□□□ -0.9
RIF1-205ENST00000444746 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 HSPA2P54652 639 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 KLHL10Q6JEL2 608 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 VAT1LQ9HCJ6 419 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 EFCAB5A4FU69 1503 aa9.46□□□□□ -0.9
RIF1-205ENST00000444746 KIAA0586Q9BVV6 1533 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 FAM193AP78312 1265 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 GNL3LQ9NVN8 582 aaKnown RBP9.45□□□□□ -0.9
RIF1-205ENST00000444746 CHPF2Q9P2E5 772 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 RANBP6O60518 1105 aaKnown RBP9.45□□□□□ -0.9
RIF1-205ENST00000444746 DDX17Q92841 729 aaKnown RBP9.45□□□□□ -0.9
RIF1-205ENST00000444746 UBAC1Q9BSL1 405 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 SEPT11Q9NVA2 429 aaKnown RBP9.45□□□□□ -0.9
RIF1-205ENST00000444746 DNA2P51530 1060 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 HIP1O00291 1037 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 RLBP1P12271 317 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 IGHMBP2P38935 993 aaKnown RBP9.45□□□□□ -0.9
RIF1-205ENST00000444746 HSP90AA4PQ58FG1 418 aa9.45□□□□□ -0.9
RIF1-205ENST00000444746 MAPK8IP2Q13387 824 aaPredicted RBP9.45□□□□□ -0.9
RIF1-205ENST00000444746 TNPO1Q92973 898 aaKnown RBP9.45□□□□□ -0.9
RIF1-205ENST00000444746 WDR33Q9C0J8 1336 aaKnown RBP9.44□□□□□ -0.9
RIF1-205ENST00000444746 PPP1R42Q7Z4L9 355 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 ANKIB1Q9P2G1 1089 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 DDX46Q7L014 1031 aaKnown RBP9.44□□□□□ -0.9
RIF1-205ENST00000444746 CHST3Q7LGC8 479 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 NACAP1Q9BZK3 213 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 KRT85P78386 507 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 ZNF830Q96NB3 372 aaPredicted RBP9.44□□□□□ -0.9
RIF1-205ENST00000444746 NAT10Q9H0A0 1025 aaKnown RBP9.44□□□□□ -0.9
RIF1-205ENST00000444746 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
RIF1-205ENST00000444746 KIF1BPQ96EK5 621 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 UBE3BQ7Z3V4 1068 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
RIF1-205ENST00000444746 MAGEC2Q9UBF1 373 aaPredicted RBP9.44□□□□□ -0.9
RIF1-205ENST00000444746 F8W031 263 aaPredicted RBP9.43□□□□□ -0.9
RIF1-205ENST00000444746 CCDC70Q6NSX1 233 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 SEC24BO95487 1268 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 NUP62CLQ9H1M0 184 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 URB2Q14146 1524 aaKnown RBP9.43□□□□□ -0.9
RIF1-205ENST00000444746 RAB11FIP3O75154 756 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 HELBQ8NG08 1087 aaPredicted RBP9.43□□□□□ -0.9
RIF1-205ENST00000444746 C14orf93Q9H972 538 aaKnown RBP9.43□□□□□ -0.9
RIF1-205ENST00000444746 SLC3A2P08195 630 aaKnown RBP9.43□□□□□ -0.9
RIF1-205ENST00000444746 LIG1P18858 919 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 SOGA3Q5TF21 947 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 TRIM22Q8IYM9 498 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 SBNO2Q9Y2G9 1366 aa9.43□□□□□ -0.9
RIF1-205ENST00000444746 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 CCDC173Q0VFZ6 552 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 IMMTQ16891 758 aaKnown RBP9.42□□□□□ -0.9
RIF1-205ENST00000444746 MTHFSDQ2M296 383 aaKnown RBP9.42□□□□□ -0.9
RIF1-205ENST00000444746 TRMT1Q9NXH9 659 aaKnown RBP9.42□□□□□ -0.9
RIF1-205ENST00000444746 DNMBPQ6XZF7 1577 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 PHACTR3Q96KR7 559 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 MBD3O95983 291 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 CCDC192P0DO97 292 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 GJB2P29033 226 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 UQCRHLA0A096LP55 91 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 STARD3NLO95772 234 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 UQCRHP07919 91 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
RIF1-205ENST00000444746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.42□□□□□ -0.92e-8■■■■■ 177.7
RIF1-205ENST00000444746 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 NGLY1Q96IV0 654 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
RIF1-205ENST00000444746 THOC2Q8NI27 1593 aaKnown RBP9.42□□□□□ -0.9
RIF1-205ENST00000444746 CPA1P15085 419 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 AAMPQ13685 434 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 CARD14Q9BXL6 1004 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 USP25Q9UHP3 1055 aa9.42□□□□□ -0.9
RIF1-205ENST00000444746 ODF2Q5BJF6 829 aa9.41□□□□□ -0.9
RIF1-205ENST00000444746 CCAR1Q8IX12 1150 aaKnown RBP9.41□□□□□ -0.9
RIF1-205ENST00000444746 NKTRP30414 1462 aaKnown RBP9.41□□□□□ -0.9
RIF1-205ENST00000444746 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
RIF1-205ENST00000444746 RUFY1Q96T51 708 aa9.41□□□□□ -0.9
RIF1-205ENST00000444746 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
RIF1-205ENST00000444746 PHAXQ9H814 394 aaKnown RBP9.41□□□□□ -0.9
RIF1-205ENST00000444746 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
RIF1-205ENST00000444746 ZNF76P36508 570 aa9.41□□□□□ -0.9
RIF1-205ENST00000444746 IFIT5Q13325 482 aaKnown RBP9.41□□□□□ -0.9
RIF1-205ENST00000444746 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
RIF1-205ENST00000444746 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
RIF1-205ENST00000444746 XAGE3Q8WTP9 111 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms