RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 CLTCQ00610 1675 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 PTPRCP08575 1304 aa17.14■□□□□ 0.34
SMARCA4-204ENST00000444061 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 SYNMO15061 1565 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 CLTCL1P53675 1640 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 IFIT5Q13325 482 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
SMARCA4-204ENST00000444061 CWC25Q9NXE8 425 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-204ENST00000444061 KIAA0232Q92628 1395 aa17.13■□□□□ 0.33
SMARCA4-204ENST00000444061 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
SMARCA4-204ENST00000444061 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-204ENST00000444061 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-204ENST00000444061 CERKQ8TCT0 537 aa17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 CTDP1Q9Y5B0 961 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 CEP152O94986 1710 aa17.12■□□□□ 0.33
SMARCA4-204ENST00000444061 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-204ENST00000444061 CDK11BP21127 795 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-204ENST00000444061 AACSQ86V21 672 aa17.11■□□□□ 0.33
SMARCA4-204ENST00000444061 USP6P35125 1406 aa17.11■□□□□ 0.33
SMARCA4-204ENST00000444061 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
SMARCA4-204ENST00000444061 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-204ENST00000444061 SETDB2Q96T68 719 aa17.11■□□□□ 0.33
SMARCA4-204ENST00000444061 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.11■□□□□ 0.337e-8■■□□□ 12
SMARCA4-204ENST00000444061 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
SMARCA4-204ENST00000444061 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
SMARCA4-204ENST00000444061 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-204ENST00000444061 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
SMARCA4-204ENST00000444061 PDZRN3Q9UPQ7 1066 aa17.1■□□□□ 0.33
SMARCA4-204ENST00000444061 ATP7BP35670 1465 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 ANKRD18BA2A2Z9 1011 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 ST5P78524 1137 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 CAMSAP1Q5T5Y3 1602 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 ERICH2A1L162 156 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-204ENST00000444061 HIP1O00291 1037 aa17.08■□□□□ 0.33
SMARCA4-204ENST00000444061 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.33
SMARCA4-204ENST00000444061 IL1RAPL2Q9NP60 686 aa17.08■□□□□ 0.33
SMARCA4-204ENST00000444061 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.33
SMARCA4-204ENST00000444061 CDC45O75419 566 aa17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 DZIP3Q86Y13 1208 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 AKAP2Q9Y2D5 859 aa17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 PDE4AP27815 886 aa17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 CDC5LQ99459 802 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-204ENST00000444061 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 INSRP06213 1382 aa17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 KDM5AP29375 1690 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.322e-8■■□□□ 13.1
SMARCA4-204ENST00000444061 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 GNPATO15228 680 aa17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMARCA4-204ENST00000444061 ALKQ9UM73 1620 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 BAG6P46379 1132 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 TRIM27P14373 513 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 POLD1P28340 1107 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 KIF1BPQ96EK5 621 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 SLKQ9H2G2 1235 aaPredicted RBP17.06■□□□□ 0.32
SMARCA4-204ENST00000444061 RXRBP28702 533 aa17.05■□□□□ 0.32
SMARCA4-204ENST00000444061 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
SMARCA4-204ENST00000444061 APBA3O96018 575 aa17.05■□□□□ 0.32
SMARCA4-204ENST00000444061 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-204ENST00000444061 ZSCAN25Q6NSZ9 544 aa17.05■□□□□ 0.32
SMARCA4-204ENST00000444061 FAM184AQ8NB25 1140 aa17.05■□□□□ 0.32
SMARCA4-204ENST00000444061 SLC52A2Q9HAB3 445 aa17.05■□□□□ 0.32
SMARCA4-204ENST00000444061 CPLX1O14810 134 aa17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 TRAPPC3LQ5T215 181 aa17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 RAI14Q9P0K7 980 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms