RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 MSH5O43196 834 aa24.5■■□□□ 1.51
SMPD4-210ENST00000441135 PPP2R1AP30153 589 aa24.5■■□□□ 1.51
SMPD4-210ENST00000441135 ATG3Q9NT62 314 aa24.5■■□□□ 1.51
SMPD4-210ENST00000441135 CFAP53Q96M91 514 aa24.49■■□□□ 1.51
SMPD4-210ENST00000441135 CABP4P57796 275 aa24.48■■□□□ 1.51
SMPD4-210ENST00000441135 CNGB1Q14028 1251 aaPredicted RBP24.48■■□□□ 1.51
SMPD4-210ENST00000441135 ATP6V1AP38606 617 aa24.46■■□□□ 1.51
SMPD4-210ENST00000441135 RALBP1Q15311 655 aa24.46■■□□□ 1.51
SMPD4-210ENST00000441135 LINC00116Q8NCU8 138 aa24.46■■□□□ 1.51
SMPD4-210ENST00000441135 HMOX1P09601 288 aa24.45■■□□□ 1.5
SMPD4-210ENST00000441135 AKAP4Q5JQC9 854 aa24.45■■□□□ 1.5
SMPD4-210ENST00000441135 ITPK1Q13572 414 aa24.44■■□□□ 1.5
SMPD4-210ENST00000441135 SSFA2P28290 1259 aa24.43■■□□□ 1.5
SMPD4-210ENST00000441135 ZNF831Q5JPB2 1677 aa24.43■■□□□ 1.5
SMPD4-210ENST00000441135 ZNF316A6NFI3 1004 aaPredicted RBP24.42■■□□□ 1.5
SMPD4-210ENST00000441135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.41■■□□□ 1.5
SMPD4-210ENST00000441135 UBR3Q6ZT12 1888 aa24.41■■□□□ 1.5
SMPD4-210ENST00000441135 GNPATO15228 680 aa24.4■■□□□ 1.5
SMPD4-210ENST00000441135 PHF14O94880 888 aa24.4■■□□□ 1.5
SMPD4-210ENST00000441135 MSL1Q68DK7 614 aa24.4■■□□□ 1.5
SMPD4-210ENST00000441135 AMIGO3Q86WK7 504 aa24.4■■□□□ 1.5
SMPD4-210ENST00000441135 RBM42Q9BTD8 480 aaKnown RBP24.4■■□□□ 1.5
SMPD4-210ENST00000441135 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
SMPD4-210ENST00000441135 KLHL34Q8N239 644 aa24.39■■□□□ 1.49
SMPD4-210ENST00000441135 NFATC2IPQ8NCF5 419 aa24.39■■□□□ 1.49
SMPD4-210ENST00000441135 U2SURPO15042 1029 aaKnown RBP24.38■■□□□ 1.49
SMPD4-210ENST00000441135 SLC4A9Q96Q91 983 aa24.38■■□□□ 1.49
SMPD4-210ENST00000441135 MRC1P22897 1456 aa24.38■■□□□ 1.49
SMPD4-210ENST00000441135 SCN11AQ9UI33 1791 aa24.37■■□□□ 1.49
SMPD4-210ENST00000441135 CNTNAP4Q9C0A0 1308 aa24.36■■□□□ 1.49
SMPD4-210ENST00000441135 YY1P25490 414 aa24.36■■□□□ 1.49
SMPD4-210ENST00000441135 MTHFSDQ2M296 383 aaKnown RBP24.36■■□□□ 1.49
SMPD4-210ENST00000441135 SLC52A2Q9HAB3 445 aa24.36■■□□□ 1.49
SMPD4-210ENST00000441135 RC3H1Q5TC82 1133 aaKnown RBP24.35■■□□□ 1.49
SMPD4-210ENST00000441135 MYBBP1AQ9BQG0 1328 aaKnown RBP24.35■■□□□ 1.49
SMPD4-210ENST00000441135 RNMTO43148 476 aaKnown RBP24.34■■□□□ 1.49
SMPD4-210ENST00000441135 RTCBQ9Y3I0 505 aaKnown RBP24.34■■□□□ 1.49
SMPD4-210ENST00000441135 PTCD1O75127 700 aaKnown RBP24.33■■□□□ 1.49
SMPD4-210ENST00000441135 ADRA2BP18089 450 aa24.33■■□□□ 1.49
SMPD4-210ENST00000441135 ADAMTS7Q9UKP4 1686 aa24.33■■□□□ 1.49
SMPD4-210ENST00000441135 COL5A3P25940 1745 aaPredicted RBP24.32■■□□□ 1.48
SMPD4-210ENST00000441135 SMIM5Q71RC9 77 aa24.32■■□□□ 1.48
SMPD4-210ENST00000441135 GAS2L2Q8NHY3 880 aa24.32■■□□□ 1.48
SMPD4-210ENST00000441135 LGR6Q9HBX8 967 aa24.32■■□□□ 1.48
SMPD4-210ENST00000441135 CICQ96RK0 1608 aaPredicted RBP24.32■■□□□ 1.48
SMPD4-210ENST00000441135 TRAPPC3LQ5T215 181 aa24.3■■□□□ 1.48
SMPD4-210ENST00000441135 NLGN2Q8NFZ4 835 aa24.3■■□□□ 1.48
SMPD4-210ENST00000441135 RSPH6AQ9H0K4 717 aa24.3■■□□□ 1.48
SMPD4-210ENST00000441135 PRKRIP1Q9H875 184 aaPredicted RBP24.3■■□□□ 1.48
SMPD4-210ENST00000441135 CD2APQ9Y5K6 639 aa24.3■■□□□ 1.48
SMPD4-210ENST00000441135 FCHSD2O94868 740 aa24.29■■□□□ 1.48
SMPD4-210ENST00000441135 GPR162Q16538 588 aa24.29■■□□□ 1.48
SMPD4-210ENST00000441135 RPS6KA4O75676 772 aa24.28■■□□□ 1.48
SMPD4-210ENST00000441135 U2AF1L5P0DN76 240 aaPredicted RBP24.28■■□□□ 1.48
SMPD4-210ENST00000441135 U2AF1Q01081 240 aaKnown RBP eCLIP24.28■■□□□ 1.48
SMPD4-210ENST00000441135 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
SMPD4-210ENST00000441135 PRKAR2BP31323 418 aa24.26■■□□□ 1.47
SMPD4-210ENST00000441135 CRKLP46109 303 aaKnown RBP24.26■■□□□ 1.47
SMPD4-210ENST00000441135 TJP1Q07157 1748 aa24.26■■□□□ 1.47
SMPD4-210ENST00000441135 RFC4P35249 363 aa24.24■■□□□ 1.47
SMPD4-210ENST00000441135 NLGN1Q8N2Q7 840 aa24.24■■□□□ 1.47
SMPD4-210ENST00000441135 ARHGEF1Q92888 912 aaKnown RBP24.24■■□□□ 1.47
SMPD4-210ENST00000441135 KCPQ6ZWJ8 1503 aa24.24■■□□□ 1.47
SMPD4-210ENST00000441135 SLC39A6Q13433 755 aa24.23■■□□□ 1.47
SMPD4-210ENST00000441135 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
SMPD4-210ENST00000441135 MMP10P09238 476 aa24.22■■□□□ 1.47
SMPD4-210ENST00000441135 TEFQ10587 303 aa24.22■■□□□ 1.47
SMPD4-210ENST00000441135 DNAJC10Q8IXB1 793 aa24.21■■□□□ 1.47
SMPD4-210ENST00000441135 VSIG10Q8N0Z9 540 aa24.21■■□□□ 1.47
SMPD4-210ENST00000441135 PHACTR3Q96KR7 559 aa24.21■■□□□ 1.47
SMPD4-210ENST00000441135 VIRMAQ69YN4 1812 aaKnown RBP24.21■■□□□ 1.47
SMPD4-210ENST00000441135 MYH14Q7Z406 1995 aaKnown RBP24.2■■□□□ 1.46
SMPD4-210ENST00000441135 TTC5Q8N0Z6 440 aa24.2■■□□□ 1.46
SMPD4-210ENST00000441135 IL17REQ8NFR9 667 aa24.2■■□□□ 1.46
SMPD4-210ENST00000441135 PNNQ9H307 717 aaKnown RBP24.2■■□□□ 1.46
SMPD4-210ENST00000441135 CCDC87Q9NVE4 849 aa24.2■■□□□ 1.46
SMPD4-210ENST00000441135 CEMIPQ8WUJ3 1361 aa24.19■■□□□ 1.46
SMPD4-210ENST00000441135 GRIN3BO60391 1043 aa24.19■■□□□ 1.46
SMPD4-210ENST00000441135 GYS1P13807 737 aa24.19■■□□□ 1.46
SMPD4-210ENST00000441135 INTS5Q6P9B9 1019 aaKnown RBP24.19■■□□□ 1.46
SMPD4-210ENST00000441135 C4AP0C0L4 1744 aa24.18■■□□□ 1.46
SMPD4-210ENST00000441135 USP42Q9H9J4 1324 aaKnown RBP24.17■■□□□ 1.46
SMPD4-210ENST00000441135 UBR2Q8IWV8 1755 aa24.17■■□□□ 1.46
SMPD4-210ENST00000441135 CYP19A1P11511 503 aaPredicted RBP24.17■■□□□ 1.46
SMPD4-210ENST00000441135 YBX3P16989 372 aaKnown RBP eCLIP24.16■■□□□ 1.46
SMPD4-210ENST00000441135 SOS1Q07889 1333 aaPredicted RBP24.15■■□□□ 1.46
SMPD4-210ENST00000441135 NEFMP07197 916 aa24.15■■□□□ 1.46
SMPD4-210ENST00000441135 ZNF790Q6PG37 636 aa24.15■■□□□ 1.46
SMPD4-210ENST00000441135 PLEKHF1Q96S99 279 aa24.15■■□□□ 1.46
SMPD4-210ENST00000441135 UTRNP46939 3433 aa24.15■■□□□ 1.46
SMPD4-210ENST00000441135 CHD4Q14839 1912 aa24.14■■□□□ 1.46
SMPD4-210ENST00000441135 C10orf71Q711Q0 1435 aa24.13■■□□□ 1.45
SMPD4-210ENST00000441135 HTATSF1O43719 755 aaKnown RBP24.13■■□□□ 1.45
SMPD4-210ENST00000441135 STARD3NLO95772 234 aa24.13■■□□□ 1.45
SMPD4-210ENST00000441135 RTF1Q92541 710 aaKnown RBP24.13■■□□□ 1.45
SMPD4-210ENST00000441135 PARP3Q9Y6F1 533 aa24.13■■□□□ 1.45
SMPD4-210ENST00000441135 SIPA1L3O60292 1781 aaPredicted RBP24.13■■□□□ 1.45
SMPD4-210ENST00000441135 ZNF496Q96IT1 587 aaPredicted RBP24.12■■□□□ 1.45
SMPD4-210ENST00000441135 SRP68Q9UHB9 627 aaKnown RBP24.12■■□□□ 1.45
SMPD4-210ENST00000441135 HEG1Q9ULI3 1381 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms