RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
LTBR-202ENST00000440421 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
LTBR-202ENST00000440421 ATP6V1AP38606 617 aa18.41■□□□□ 0.54
LTBR-202ENST00000440421 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.54
LTBR-202ENST00000440421 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
LTBR-202ENST00000440421 PRKAR2BP31323 418 aa18.4■□□□□ 0.54
LTBR-202ENST00000440421 ITPK1Q13572 414 aa18.4■□□□□ 0.54
LTBR-202ENST00000440421 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
LTBR-202ENST00000440421 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
LTBR-202ENST00000440421 AK7Q96M32 723 aa18.4■□□□□ 0.54
LTBR-202ENST00000440421 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
LTBR-202ENST00000440421 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
LTBR-202ENST00000440421 RSPH6AQ9H0K4 717 aa18.39■□□□□ 0.53
LTBR-202ENST00000440421 VIRMAQ69YN4 1812 aaKnown RBP18.38■□□□□ 0.53
LTBR-202ENST00000440421 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
LTBR-202ENST00000440421 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
LTBR-202ENST00000440421 SLC4A9Q96Q91 983 aa18.38■□□□□ 0.53
LTBR-202ENST00000440421 SLC52A2Q9HAB3 445 aa18.38■□□□□ 0.53
LTBR-202ENST00000440421 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
LTBR-202ENST00000440421 PHF14O94880 888 aa18.37■□□□□ 0.53
LTBR-202ENST00000440421 AMIGO3Q86WK7 504 aa18.37■□□□□ 0.53
LTBR-202ENST00000440421 GAS2L2Q8NHY3 880 aa18.37■□□□□ 0.53
LTBR-202ENST00000440421 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
LTBR-202ENST00000440421 SGIP1Q9BQI5 828 aa18.37■□□□□ 0.53
LTBR-202ENST00000440421 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
LTBR-202ENST00000440421 GNAT3A8MTJ3 354 aa18.35■□□□□ 0.53
LTBR-202ENST00000440421 RALBP1Q15311 655 aa18.35■□□□□ 0.53
LTBR-202ENST00000440421 MRC1P22897 1456 aa18.34■□□□□ 0.53
LTBR-202ENST00000440421 GNPATO15228 680 aa18.34■□□□□ 0.53
LTBR-202ENST00000440421 MSL1Q68DK7 614 aa18.34■□□□□ 0.53
LTBR-202ENST00000440421 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
LTBR-202ENST00000440421 ARXQ96QS3 562 aa18.34■□□□□ 0.53
LTBR-202ENST00000440421 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
LTBR-202ENST00000440421 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
LTBR-202ENST00000440421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.33■□□□□ 0.52
LTBR-202ENST00000440421 FCHSD2O94868 740 aa18.33■□□□□ 0.52
LTBR-202ENST00000440421 POLD1P28340 1107 aa18.33■□□□□ 0.52
LTBR-202ENST00000440421 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
LTBR-202ENST00000440421 FHDC1Q9C0D6 1143 aaPredicted RBP18.33■□□□□ 0.52
LTBR-202ENST00000440421 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
LTBR-202ENST00000440421 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
LTBR-202ENST00000440421 SSFA2P28290 1259 aa18.31■□□□□ 0.52
LTBR-202ENST00000440421 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
LTBR-202ENST00000440421 COL5A3P25940 1745 aaPredicted RBP18.31■□□□□ 0.52
LTBR-202ENST00000440421 COL24A1Q17RW2 1714 aa18.3■□□□□ 0.52
LTBR-202ENST00000440421 TEFQ10587 303 aa18.3■□□□□ 0.52
LTBR-202ENST00000440421 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
LTBR-202ENST00000440421 RTCBQ9Y3I0 505 aaKnown RBP18.29■□□□□ 0.52
LTBR-202ENST00000440421 TJP1Q07157 1748 aa18.29■□□□□ 0.52
LTBR-202ENST00000440421 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
LTBR-202ENST00000440421 CNTNAP4Q9C0A0 1308 aa18.28■□□□□ 0.52
LTBR-202ENST00000440421 NEFMP07197 916 aa18.27■□□□□ 0.52
LTBR-202ENST00000440421 CRKLP46109 303 aaKnown RBP18.27■□□□□ 0.52
LTBR-202ENST00000440421 RC3H1Q5TC82 1133 aaKnown RBP18.27■□□□□ 0.52
LTBR-202ENST00000440421 DNAJC10Q8IXB1 793 aa18.27■□□□□ 0.52
LTBR-202ENST00000440421 KCPQ6ZWJ8 1503 aa18.27■□□□□ 0.51
LTBR-202ENST00000440421 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
LTBR-202ENST00000440421 MCM10Q7L590 875 aa18.26■□□□□ 0.51
LTBR-202ENST00000440421 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
LTBR-202ENST00000440421 RTF1Q92541 710 aaKnown RBP18.26■□□□□ 0.51
LTBR-202ENST00000440421 CEMIPQ8WUJ3 1361 aa18.26■□□□□ 0.51
LTBR-202ENST00000440421 MYH14Q7Z406 1995 aaKnown RBP18.26■□□□□ 0.51
LTBR-202ENST00000440421 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
LTBR-202ENST00000440421 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
LTBR-202ENST00000440421 RPS6KA4O75676 772 aa18.25■□□□□ 0.51
LTBR-202ENST00000440421 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
LTBR-202ENST00000440421 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
LTBR-202ENST00000440421 ARHGEF1Q92888 912 aaKnown RBP18.24■□□□□ 0.51
LTBR-202ENST00000440421 UBR2Q8IWV8 1755 aa18.24■□□□□ 0.51
LTBR-202ENST00000440421 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
LTBR-202ENST00000440421 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
LTBR-202ENST00000440421 BTBD11A6QL63 1104 aa18.22■□□□□ 0.51
LTBR-202ENST00000440421 ADRA2BP18089 450 aa18.22■□□□□ 0.51
LTBR-202ENST00000440421 RFC4P35249 363 aa18.22■□□□□ 0.51
LTBR-202ENST00000440421 INTS5Q6P9B9 1019 aaKnown RBP18.22■□□□□ 0.51
LTBR-202ENST00000440421 ZNF496Q96IT1 587 aaPredicted RBP18.22■□□□□ 0.51
LTBR-202ENST00000440421 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
LTBR-202ENST00000440421 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
LTBR-202ENST00000440421 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
LTBR-202ENST00000440421 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
LTBR-202ENST00000440421 KCNQ3O43525 872 aa18.21■□□□□ 0.51
LTBR-202ENST00000440421 CYP19A1P11511 503 aaPredicted RBP18.21■□□□□ 0.51
LTBR-202ENST00000440421 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
LTBR-202ENST00000440421 DLG5Q8TDM6 1919 aa18.2■□□□□ 0.5
LTBR-202ENST00000440421 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
LTBR-202ENST00000440421 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
LTBR-202ENST00000440421 NLGN2Q8NFZ4 835 aa18.2■□□□□ 0.5
LTBR-202ENST00000440421 C4AP0C0L4 1744 aa18.2■□□□□ 0.5
LTBR-202ENST00000440421 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
LTBR-202ENST00000440421 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
LTBR-202ENST00000440421 MMP10P09238 476 aa18.18■□□□□ 0.5
LTBR-202ENST00000440421 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
LTBR-202ENST00000440421 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
LTBR-202ENST00000440421 ZBTB1Q9Y2K1 713 aa18.18■□□□□ 0.5
LTBR-202ENST00000440421 STARD3NLO95772 234 aa18.17■□□□□ 0.5
LTBR-202ENST00000440421 GYS1P13807 737 aa18.17■□□□□ 0.5
LTBR-202ENST00000440421 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
LTBR-202ENST00000440421 NLGN1Q8N2Q7 840 aa18.17■□□□□ 0.5
LTBR-202ENST00000440421 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
LTBR-202ENST00000440421 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms