RNA–Protein interactions for RNA: ENST00000439915.1

ATAD2B-204, Transcript of ATPase family, AAA domain containing 2B, humanhuman

TSL 1 (best)

Gene ATAD2B, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD2B-204ENST00000439915 KDM6AO15550 1401 aaPredicted RBP23.66■■□□□ 1.38
ATAD2B-204ENST00000439915 SCN11AQ9UI33 1791 aa23.66■■□□□ 1.38
ATAD2B-204ENST00000439915 ATP6V1AP38606 617 aa23.66■■□□□ 1.38
ATAD2B-204ENST00000439915 CABP4P57796 275 aa23.66■■□□□ 1.38
ATAD2B-204ENST00000439915 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
ATAD2B-204ENST00000439915 CNGB1Q14028 1251 aaPredicted RBP23.63■■□□□ 1.37
ATAD2B-204ENST00000439915 HMOX1P09601 288 aa23.62■■□□□ 1.37
ATAD2B-204ENST00000439915 AKAP4Q5JQC9 854 aa23.62■■□□□ 1.37
ATAD2B-204ENST00000439915 LINC00116Q8NCU8 138 aa23.62■■□□□ 1.37
ATAD2B-204ENST00000439915 SSFA2P28290 1259 aa23.61■■□□□ 1.37
ATAD2B-204ENST00000439915 ITPK1Q13572 414 aa23.6■■□□□ 1.37
ATAD2B-204ENST00000439915 KLHL34Q8N239 644 aa23.6■■□□□ 1.37
ATAD2B-204ENST00000439915 RBM42Q9BTD8 480 aaKnown RBP23.6■■□□□ 1.37
ATAD2B-204ENST00000439915 COL3A1P02461 1466 aaPredicted RBP23.6■■□□□ 1.37
ATAD2B-204ENST00000439915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.59■■□□□ 1.37
ATAD2B-204ENST00000439915 PHF14O94880 888 aa23.59■■□□□ 1.37
ATAD2B-204ENST00000439915 YY1P25490 414 aa23.59■■□□□ 1.37
ATAD2B-204ENST00000439915 COL5A3P25940 1745 aaPredicted RBP23.58■■□□□ 1.37
ATAD2B-204ENST00000439915 GNPATO15228 680 aa23.58■■□□□ 1.36
ATAD2B-204ENST00000439915 MSL1Q68DK7 614 aa23.58■■□□□ 1.36
ATAD2B-204ENST00000439915 NFATC2IPQ8NCF5 419 aa23.58■■□□□ 1.36
ATAD2B-204ENST00000439915 CFAP53Q96M91 514 aa23.57■■□□□ 1.36
ATAD2B-204ENST00000439915 CHD4Q14839 1912 aa23.56■■□□□ 1.36
ATAD2B-204ENST00000439915 U2SURPO15042 1029 aaKnown RBP23.56■■□□□ 1.36
ATAD2B-204ENST00000439915 AMIGO3Q86WK7 504 aa23.55■■□□□ 1.36
ATAD2B-204ENST00000439915 RC3H1Q5TC82 1133 aaKnown RBP23.54■■□□□ 1.36
ATAD2B-204ENST00000439915 SLC4A9Q96Q91 983 aa23.54■■□□□ 1.36
ATAD2B-204ENST00000439915 MTHFSDQ2M296 383 aaKnown RBP23.53■■□□□ 1.36
ATAD2B-204ENST00000439915 SLC52A2Q9HAB3 445 aa23.53■■□□□ 1.36
ATAD2B-204ENST00000439915 RTCBQ9Y3I0 505 aaKnown RBP23.53■■□□□ 1.36
ATAD2B-204ENST00000439915 ADAMTS7Q9UKP4 1686 aa23.53■■□□□ 1.36
ATAD2B-204ENST00000439915 CNTNAP4Q9C0A0 1308 aa23.53■■□□□ 1.36
ATAD2B-204ENST00000439915 MRC1P22897 1456 aa23.53■■□□□ 1.36
ATAD2B-204ENST00000439915 CICQ96RK0 1608 aaPredicted RBP23.52■■□□□ 1.36
ATAD2B-204ENST00000439915 RNMTO43148 476 aaKnown RBP23.52■■□□□ 1.36
ATAD2B-204ENST00000439915 PTCD1O75127 700 aaKnown RBP23.51■■□□□ 1.35
ATAD2B-204ENST00000439915 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
ATAD2B-204ENST00000439915 ADRA2BP18089 450 aa23.5■■□□□ 1.35
ATAD2B-204ENST00000439915 GPR162Q16538 588 aa23.5■■□□□ 1.35
ATAD2B-204ENST00000439915 TRAPPC3LQ5T215 181 aa23.5■■□□□ 1.35
ATAD2B-204ENST00000439915 SMIM5Q71RC9 77 aa23.5■■□□□ 1.35
ATAD2B-204ENST00000439915 LGR6Q9HBX8 967 aa23.5■■□□□ 1.35
ATAD2B-204ENST00000439915 NUDCQ9Y266 331 aa23.5■■□□□ 1.35
ATAD2B-204ENST00000439915 GAS2L2Q8NHY3 880 aa23.5■■□□□ 1.35
ATAD2B-204ENST00000439915 TJP1Q07157 1748 aa23.49■■□□□ 1.35
ATAD2B-204ENST00000439915 PPP2R1AP30153 589 aa23.49■■□□□ 1.35
ATAD2B-204ENST00000439915 CD2APQ9Y5K6 639 aa23.49■■□□□ 1.35
ATAD2B-204ENST00000439915 RPS6KA4O75676 772 aa23.48■■□□□ 1.35
ATAD2B-204ENST00000439915 NLGN2Q8NFZ4 835 aa23.48■■□□□ 1.35
ATAD2B-204ENST00000439915 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
ATAD2B-204ENST00000439915 C4AP0C0L4 1744 aa23.44■■□□□ 1.34
ATAD2B-204ENST00000439915 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
ATAD2B-204ENST00000439915 RFC4P35249 363 aa23.44■■□□□ 1.34
ATAD2B-204ENST00000439915 CRKLP46109 303 aaKnown RBP23.44■■□□□ 1.34
ATAD2B-204ENST00000439915 ARHGEF1Q92888 912 aaKnown RBP23.44■■□□□ 1.34
ATAD2B-204ENST00000439915 NLGN1Q8N2Q7 840 aa23.43■■□□□ 1.34
ATAD2B-204ENST00000439915 UBR2Q8IWV8 1755 aa23.43■■□□□ 1.34
ATAD2B-204ENST00000439915 PRKAR2BP31323 418 aa23.42■■□□□ 1.34
ATAD2B-204ENST00000439915 TEFQ10587 303 aa23.42■■□□□ 1.34
ATAD2B-204ENST00000439915 SLC39A6Q13433 755 aa23.42■■□□□ 1.34
ATAD2B-204ENST00000439915 RSPH6AQ9H0K4 717 aa23.42■■□□□ 1.34
ATAD2B-204ENST00000439915 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
ATAD2B-204ENST00000439915 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
ATAD2B-204ENST00000439915 GRIN3BO60391 1043 aa23.41■■□□□ 1.34
ATAD2B-204ENST00000439915 U2AF1L5P0DN76 240 aaPredicted RBP23.41■■□□□ 1.34
ATAD2B-204ENST00000439915 U2AF1Q01081 240 aaKnown RBP eCLIP23.41■■□□□ 1.34
ATAD2B-204ENST00000439915 MMP10P09238 476 aa23.4■■□□□ 1.34
ATAD2B-204ENST00000439915 TTC5Q8N0Z6 440 aa23.4■■□□□ 1.34
ATAD2B-204ENST00000439915 VSIG10Q8N0Z9 540 aa23.4■■□□□ 1.34
ATAD2B-204ENST00000439915 FCHSD2O94868 740 aa23.39■■□□□ 1.33
ATAD2B-204ENST00000439915 DNAJC10Q8IXB1 793 aa23.39■■□□□ 1.33
ATAD2B-204ENST00000439915 KIF13BQ9NQT8 1826 aa23.38■■□□□ 1.33
ATAD2B-204ENST00000439915 GYS1P13807 737 aa23.38■■□□□ 1.33
ATAD2B-204ENST00000439915 IL17REQ8NFR9 667 aa23.38■■□□□ 1.33
ATAD2B-204ENST00000439915 CCDC87Q9NVE4 849 aa23.38■■□□□ 1.33
ATAD2B-204ENST00000439915 INTS5Q6P9B9 1019 aaKnown RBP23.37■■□□□ 1.33
ATAD2B-204ENST00000439915 PHACTR3Q96KR7 559 aa23.37■■□□□ 1.33
ATAD2B-204ENST00000439915 CYP19A1P11511 503 aaPredicted RBP23.35■■□□□ 1.33
ATAD2B-204ENST00000439915 UTRNP46939 3433 aa23.35■■□□□ 1.33
ATAD2B-204ENST00000439915 CEMIPQ8WUJ3 1361 aa23.35■■□□□ 1.33
ATAD2B-204ENST00000439915 YBX3P16989 372 aaKnown RBP eCLIP23.34■■□□□ 1.33
ATAD2B-204ENST00000439915 PARP3Q9Y6F1 533 aa23.34■■□□□ 1.33
ATAD2B-204ENST00000439915 USP42Q9H9J4 1324 aaKnown RBP23.34■■□□□ 1.33
ATAD2B-204ENST00000439915 ZNF790Q6PG37 636 aa23.33■■□□□ 1.33
ATAD2B-204ENST00000439915 RTF1Q92541 710 aaKnown RBP23.33■■□□□ 1.33
ATAD2B-204ENST00000439915 NEFMP07197 916 aa23.33■■□□□ 1.32
ATAD2B-204ENST00000439915 SOS1Q07889 1333 aaPredicted RBP23.32■■□□□ 1.32
ATAD2B-204ENST00000439915 ZPR1O75312 459 aa23.32■■□□□ 1.32
ATAD2B-204ENST00000439915 STARD3NLO95772 234 aa23.32■■□□□ 1.32
ATAD2B-204ENST00000439915 ZNF784Q8NCA9 323 aaPredicted RBP23.32■■□□□ 1.32
ATAD2B-204ENST00000439915 TEX13AQ9BXU3 409 aaPredicted RBP23.32■■□□□ 1.32
ATAD2B-204ENST00000439915 SRP68Q9UHB9 627 aaKnown RBP23.31■■□□□ 1.32
ATAD2B-204ENST00000439915 TGFB2P61812 414 aa23.3■■□□□ 1.32
ATAD2B-204ENST00000439915 COL15A1P39059 1388 aa23.3■■□□□ 1.32
ATAD2B-204ENST00000439915 HEG1Q9ULI3 1381 aa23.3■■□□□ 1.32
ATAD2B-204ENST00000439915 C10orf71Q711Q0 1435 aa23.3■■□□□ 1.32
ATAD2B-204ENST00000439915 BTBD11A6QL63 1104 aa23.29■■□□□ 1.32
ATAD2B-204ENST00000439915 HTATSF1O43719 755 aaKnown RBP23.29■■□□□ 1.32
ATAD2B-204ENST00000439915 ZNF496Q96IT1 587 aaPredicted RBP23.29■■□□□ 1.32
ATAD2B-204ENST00000439915 FMNL2Q96PY5 1086 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms