RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 DCAF5Q96JK2 942 aa18.72■□□□□ 0.59
PRAME-209ENST00000439106 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.59
PRAME-209ENST00000439106 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
PRAME-209ENST00000439106 ITPK1Q13572 414 aa18.71■□□□□ 0.59
PRAME-209ENST00000439106 MSL1Q68DK7 614 aa18.71■□□□□ 0.59
PRAME-209ENST00000439106 ARXQ96QS3 562 aa18.71■□□□□ 0.59
PRAME-209ENST00000439106 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
PRAME-209ENST00000439106 PHF14O94880 888 aa18.7■□□□□ 0.58
PRAME-209ENST00000439106 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
PRAME-209ENST00000439106 AK7Q96M32 723 aa18.7■□□□□ 0.58
PRAME-209ENST00000439106 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
PRAME-209ENST00000439106 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
PRAME-209ENST00000439106 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
PRAME-209ENST00000439106 CABP4P57796 275 aa18.69■□□□□ 0.58
PRAME-209ENST00000439106 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
PRAME-209ENST00000439106 SLC4A9Q96Q91 983 aa18.69■□□□□ 0.58
PRAME-209ENST00000439106 SYT17Q9BSW7 474 aa18.69■□□□□ 0.58
PRAME-209ENST00000439106 RBM42Q9BTD8 480 aaKnown RBP18.68■□□□□ 0.58
PRAME-209ENST00000439106 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
PRAME-209ENST00000439106 SIPA1L3O60292 1781 aaPredicted RBP18.67■□□□□ 0.58
PRAME-209ENST00000439106 CHD4Q14839 1912 aa18.66■□□□□ 0.58
PRAME-209ENST00000439106 MRC1P22897 1456 aa18.66■□□□□ 0.58
PRAME-209ENST00000439106 POLD1P28340 1107 aa18.66■□□□□ 0.58
PRAME-209ENST00000439106 AKAP4Q5JQC9 854 aa18.66■□□□□ 0.58
PRAME-209ENST00000439106 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
PRAME-209ENST00000439106 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
PRAME-209ENST00000439106 CICQ96RK0 1608 aaPredicted RBP18.66■□□□□ 0.58
PRAME-209ENST00000439106 UTRNP46939 3433 aa18.66■□□□□ 0.58
PRAME-209ENST00000439106 PPP2R1AP30153 589 aa18.65■□□□□ 0.58
PRAME-209ENST00000439106 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
PRAME-209ENST00000439106 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.57
PRAME-209ENST00000439106 GNPATO15228 680 aa18.64■□□□□ 0.57
PRAME-209ENST00000439106 DLG5Q8TDM6 1919 aa18.64■□□□□ 0.57
PRAME-209ENST00000439106 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
PRAME-209ENST00000439106 RNMTO43148 476 aaKnown RBP18.62■□□□□ 0.57
PRAME-209ENST00000439106 MAP3K5Q99683 1374 aa18.62■□□□□ 0.57
PRAME-209ENST00000439106 FLAD1Q8NFF5 587 aa18.61■□□□□ 0.57
PRAME-209ENST00000439106 NLGN2Q8NFZ4 835 aa18.61■□□□□ 0.57
PRAME-209ENST00000439106 CFAP53Q96M91 514 aa18.61■□□□□ 0.57
PRAME-209ENST00000439106 SLC52A2Q9HAB3 445 aa18.61■□□□□ 0.57
PRAME-209ENST00000439106 KCPQ6ZWJ8 1503 aa18.6■□□□□ 0.57
PRAME-209ENST00000439106 SSFA2P28290 1259 aa18.6■□□□□ 0.57
PRAME-209ENST00000439106 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
PRAME-209ENST00000439106 DCAF8L1A6NGE4 600 aa18.59■□□□□ 0.57
PRAME-209ENST00000439106 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
PRAME-209ENST00000439106 GOLGB1Q14789 3259 aaKnown RBP18.59■□□□□ 0.57
PRAME-209ENST00000439106 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.56
PRAME-209ENST00000439106 HMGB2P26583 209 aaKnown RBP18.57■□□□□ 0.56
PRAME-209ENST00000439106 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
PRAME-209ENST00000439106 CNTNAP4Q9C0A0 1308 aa18.56■□□□□ 0.56
PRAME-209ENST00000439106 N4BP2Q86UW6 1770 aaPredicted RBP18.56■□□□□ 0.56
PRAME-209ENST00000439106 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
PRAME-209ENST00000439106 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.562e-24■□□□□ 8.6
PRAME-209ENST00000439106 CRKLP46109 303 aaKnown RBP18.55■□□□□ 0.56
PRAME-209ENST00000439106 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
PRAME-209ENST00000439106 RTCBQ9Y3I0 505 aaKnown RBP18.55■□□□□ 0.56
PRAME-209ENST00000439106 KIF13BQ9NQT8 1826 aa18.55■□□□□ 0.56
PRAME-209ENST00000439106 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
PRAME-209ENST00000439106 YY1P25490 414 aa18.54■□□□□ 0.56
PRAME-209ENST00000439106 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
PRAME-209ENST00000439106 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
PRAME-209ENST00000439106 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
PRAME-209ENST00000439106 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
PRAME-209ENST00000439106 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
PRAME-209ENST00000439106 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
PRAME-209ENST00000439106 TRAPPC3LQ5T215 181 aa18.53■□□□□ 0.56
PRAME-209ENST00000439106 ARHGEF1Q92888 912 aaKnown RBP18.53■□□□□ 0.56
PRAME-209ENST00000439106 RPS6KA4O75676 772 aa18.52■□□□□ 0.56
PRAME-209ENST00000439106 RC3H1Q5TC82 1133 aaKnown RBP18.52■□□□□ 0.56
PRAME-209ENST00000439106 GPR162Q16538 588 aa18.51■□□□□ 0.55
PRAME-209ENST00000439106 WWC3Q9ULE0 1092 aa18.5■□□□□ 0.55
PRAME-209ENST00000439106 AFDNP55196 1824 aaKnown RBP18.5■□□□□ 0.55
PRAME-209ENST00000439106 MMP10P09238 476 aa18.49■□□□□ 0.55
PRAME-209ENST00000439106 TEFQ10587 303 aa18.49■□□□□ 0.55
PRAME-209ENST00000439106 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
PRAME-209ENST00000439106 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
PRAME-209ENST00000439106 BRCA1P38398 1863 aaKnown RBP18.48■□□□□ 0.55
PRAME-209ENST00000439106 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
PRAME-209ENST00000439106 GYS1P13807 737 aa18.48■□□□□ 0.55
PRAME-209ENST00000439106 RFC4P35249 363 aa18.48■□□□□ 0.55
PRAME-209ENST00000439106 FCHSD2O94868 740 aa18.47■□□□□ 0.55
PRAME-209ENST00000439106 CYP19A1P11511 503 aaPredicted RBP18.47■□□□□ 0.55
PRAME-209ENST00000439106 YBX3P16989 372 aaKnown RBP eCLIP18.47■□□□□ 0.55
PRAME-209ENST00000439106 ADRA2BP18089 450 aa18.47■□□□□ 0.55
PRAME-209ENST00000439106 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
PRAME-209ENST00000439106 MCM10Q7L590 875 aa18.47■□□□□ 0.55
PRAME-209ENST00000439106 TTC5Q8N0Z6 440 aa18.47■□□□□ 0.55
PRAME-209ENST00000439106 CCDC87Q9NVE4 849 aa18.47■□□□□ 0.55
PRAME-209ENST00000439106 ZBTB1Q9Y2K1 713 aa18.47■□□□□ 0.55
PRAME-209ENST00000439106 KCNQ3O43525 872 aa18.46■□□□□ 0.55
PRAME-209ENST00000439106 ZNF496Q96IT1 587 aaPredicted RBP18.46■□□□□ 0.55
PRAME-209ENST00000439106 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
PRAME-209ENST00000439106 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
PRAME-209ENST00000439106 ZNF790Q6PG37 636 aa18.45■□□□□ 0.54
PRAME-209ENST00000439106 SOS1Q07889 1333 aaPredicted RBP18.45■□□□□ 0.54
PRAME-209ENST00000439106 USP42Q9H9J4 1324 aaKnown RBP18.45■□□□□ 0.54
PRAME-209ENST00000439106 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
PRAME-209ENST00000439106 COL15A1P39059 1388 aa18.43■□□□□ 0.54
PRAME-209ENST00000439106 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
PRAME-209ENST00000439106 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms