RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 BABAM1Q9NWV8 329 aa27.67■■■□□ 2.02
YBX1-203ENST00000436427 MRC1P22897 1456 aa27.67■■■□□ 2.02
YBX1-203ENST00000436427 SIPA1L3O60292 1781 aaPredicted RBP27.66■■■□□ 2.02
YBX1-203ENST00000436427 ONECUT3O60422 494 aaPredicted RBP27.66■■■□□ 2.02
YBX1-203ENST00000436427 ILDR1Q86SU0 546 aaPredicted RBP27.66■■■□□ 2.02
YBX1-203ENST00000436427 ERVV-2B6SEH9 535 aa27.65■■■□□ 2.02
YBX1-203ENST00000436427 SEPT12Q8IYM1 358 aa27.65■■■□□ 2.02
YBX1-203ENST00000436427 TOGARAM1Q9Y4F4 1720 aa27.65■■■□□ 2.02
YBX1-203ENST00000436427 RBM6P78332 1123 aaKnown RBP27.64■■■□□ 2.02
YBX1-203ENST00000436427 RCAN3Q9UKA8 241 aa27.62■■■□□ 2.01
YBX1-203ENST00000436427 KDM3BQ7LBC6 1761 aa27.61■■■□□ 2.01
YBX1-203ENST00000436427 RGS17Q9UGC6 210 aaPredicted RBP27.6■■■□□ 2.01
YBX1-203ENST00000436427 DOT1LQ8TEK3 1739 aa27.59■■■□□ 2.01
YBX1-203ENST00000436427 TMOD3Q9NYL9 352 aa27.59■■■□□ 2.01
YBX1-203ENST00000436427 ELL2O00472 640 aaPredicted RBP27.58■■■□□ 2.01
YBX1-203ENST00000436427 RXRBP28702 533 aa27.58■■■□□ 2.01
YBX1-203ENST00000436427 C8orf58Q8NAV2 365 aa27.58■■■□□ 2.01
YBX1-203ENST00000436427 KCNQ3O43525 872 aa27.57■■■□□ 2
YBX1-203ENST00000436427 KRT24Q2M2I5 525 aa27.57■■■□□ 2
YBX1-203ENST00000436427 TSPYL6Q8N831 410 aa27.57■■■□□ 2
YBX1-203ENST00000436427 SYTL4Q96C24 671 aaPredicted RBP27.57■■■□□ 2
YBX1-203ENST00000436427 CT47B1P0C2W7 299 aaPredicted RBP27.57■■■□□ 2
YBX1-203ENST00000436427 SLC39A6Q13433 755 aa27.57■■■□□ 2
YBX1-203ENST00000436427 TWISTNBQ3B726 338 aaPredicted RBP27.57■■■□□ 2
YBX1-203ENST00000436427 ACSBG1Q96GR2 724 aa27.56■■■□□ 2
YBX1-203ENST00000436427 ITGB4P16144 1822 aa27.55■■■□□ 2
YBX1-203ENST00000436427 ZNF790Q6PG37 636 aa27.55■■■□□ 2
YBX1-203ENST00000436427 TTC5Q8N0Z6 440 aa27.55■■■□□ 2
YBX1-203ENST00000436427 SUPT16HQ9Y5B9 1047 aaKnown RBP27.55■■■□□ 2
YBX1-203ENST00000436427 PRIM1P49642 420 aaKnown RBP27.54■■■□□ 2
YBX1-203ENST00000436427 EIF4A1P60842 406 aaKnown RBP27.54■■■□□ 2
YBX1-203ENST00000436427 POTEAQ6S8J7 498 aa27.54■■■□□ 2
YBX1-203ENST00000436427 FAM182BQ5T319 152 aa27.53■■■□□ 2
YBX1-203ENST00000436427 PIGBQ92521 554 aa27.52■■■□□ 2
YBX1-203ENST00000436427 VAMP4O75379 141 aa27.51■■■□□ 2
YBX1-203ENST00000436427 BCL9O00512 1426 aa27.51■■■□□ 2
YBX1-203ENST00000436427 KAT6BQ8WYB5 2073 aa27.51■■□□□ 1.99
YBX1-203ENST00000436427 BRWD3Q6RI45 1802 aa27.51■■□□□ 1.99
YBX1-203ENST00000436427 RARSP54136 660 aaKnown RBP27.5■■□□□ 1.99
YBX1-203ENST00000436427 KRT27Q7Z3Y8 459 aa27.5■■□□□ 1.99
YBX1-203ENST00000436427 PAPPAQ13219 1627 aa27.49■■□□□ 1.99
YBX1-203ENST00000436427 BCAR3O75815 825 aa27.47■■□□□ 1.99
YBX1-203ENST00000436427 ZNF428Q96B54 188 aa27.47■■□□□ 1.99
YBX1-203ENST00000436427 BCL2L13Q9BXK5 485 aa27.47■■□□□ 1.99
YBX1-203ENST00000436427 RGS12O14924 1447 aa27.47■■□□□ 1.99
YBX1-203ENST00000436427 ZNF496Q96IT1 587 aaPredicted RBP27.46■■□□□ 1.99
YBX1-203ENST00000436427 FMNL2Q96PY5 1086 aa27.46■■□□□ 1.99
YBX1-203ENST00000436427 KCNQ2O43526 872 aa27.46■■□□□ 1.99
YBX1-203ENST00000436427 SMC4Q9NTJ3 1288 aa27.46■■□□□ 1.99
YBX1-203ENST00000436427 ASAP1Q9ULH1 1129 aa27.46■■□□□ 1.99
YBX1-203ENST00000436427 SOS1Q07889 1333 aaPredicted RBP27.45■■□□□ 1.98
YBX1-203ENST00000436427 SSH1Q8WYL5 1049 aa27.45■■□□□ 1.98
YBX1-203ENST00000436427 ALDH1L2Q3SY69 923 aa27.44■■□□□ 1.98
YBX1-203ENST00000436427 ATG3Q9NT62 314 aa27.44■■□□□ 1.98
YBX1-203ENST00000436427 UBR2Q8IWV8 1755 aa27.44■■□□□ 1.98
YBX1-203ENST00000436427 HEG1Q9ULI3 1381 aa27.44■■□□□ 1.98
YBX1-203ENST00000436427 TCERG1O14776 1098 aaKnown RBP27.43■■□□□ 1.98
YBX1-203ENST00000436427 PTCD1O75127 700 aaKnown RBP27.43■■□□□ 1.98
YBX1-203ENST00000436427 GIGYF1O75420 1035 aaPredicted RBP27.43■■□□□ 1.98
YBX1-203ENST00000436427 KCPQ6ZWJ8 1503 aa27.43■■□□□ 1.98
YBX1-203ENST00000436427 HOXB7P09629 217 aa27.42■■□□□ 1.98
YBX1-203ENST00000436427 NHSQ6T4R5 1651 aa27.42■■□□□ 1.98
YBX1-203ENST00000436427 RRP1P56182 461 aaKnown RBP27.41■■□□□ 1.98
YBX1-203ENST00000436427 NECTIN2Q92692 538 aa27.41■■□□□ 1.98
YBX1-203ENST00000436427 PRAMEF22A3QJZ6 481 aa27.41■■□□□ 1.98
YBX1-203ENST00000436427 EIF2S2P20042 333 aaKnown RBP27.41■■□□□ 1.98
YBX1-203ENST00000436427 HDGFL1Q5TGJ6 251 aa27.41■■□□□ 1.98
YBX1-203ENST00000436427 FAM196AQ6ZSG2 479 aa27.41■■□□□ 1.98
YBX1-203ENST00000436427 SNRPA1P09661 255 aaKnown RBP27.4■■□□□ 1.98
YBX1-203ENST00000436427 C5P01031 1676 aa27.39■■□□□ 1.98
YBX1-203ENST00000436427 CCDC30Q5VVM6 783 aa27.39■■□□□ 1.98
YBX1-203ENST00000436427 RBM42Q9BTD8 480 aaKnown RBP27.39■■□□□ 1.98
YBX1-203ENST00000436427 RNF123Q5XPI4 1314 aa27.39■■□□□ 1.97
YBX1-203ENST00000436427 PLIN1O60240 522 aa27.38■■□□□ 1.97
YBX1-203ENST00000436427 CANXP27824 592 aaKnown RBP27.38■■□□□ 1.97
YBX1-203ENST00000436427 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.38■■□□□ 1.97
YBX1-203ENST00000436427 FRAT1Q92837 279 aaPredicted RBP27.38■■□□□ 1.97
YBX1-203ENST00000436427 SBF2Q86WG5 1849 aa27.38■■□□□ 1.97
YBX1-203ENST00000436427 STK31Q9BXU1 1019 aa27.37■■□□□ 1.97
YBX1-203ENST00000436427 CHMP4AQ9BY43 222 aa27.37■■□□□ 1.97
YBX1-203ENST00000436427 PTF1AQ7RTS3 328 aa27.36■■□□□ 1.97
YBX1-203ENST00000436427 MRPL50Q8N5N7 158 aaKnown RBP27.36■■□□□ 1.97
YBX1-203ENST00000436427 PALLDQ8WX93 1383 aa27.34■■□□□ 1.97
YBX1-203ENST00000436427 BTAF1O14981 1849 aa27.34■■□□□ 1.97
YBX1-203ENST00000436427 NEFLP07196 543 aa27.34■■□□□ 1.97
YBX1-203ENST00000436427 SMARCC1Q92922 1105 aaPredicted RBP27.34■■□□□ 1.97
YBX1-203ENST00000436427 KIF16BQ96L93 1317 aa27.34■■□□□ 1.97
YBX1-203ENST00000436427 SLC4A2P04920 1241 aa27.33■■□□□ 1.97
YBX1-203ENST00000436427 LAMB4A4D0S4 1761 aa27.33■■□□□ 1.96
YBX1-203ENST00000436427 VSIG10Q8N0Z9 540 aa27.32■■□□□ 1.96
YBX1-203ENST00000436427 NOB1Q9ULX3 412 aaKnown RBP27.32■■□□□ 1.96
YBX1-203ENST00000436427 USP16Q9Y5T5 823 aa27.32■■□□□ 1.96
YBX1-203ENST00000436427 BRPF1P55201 1214 aaPredicted RBP27.31■■□□□ 1.96
YBX1-203ENST00000436427 IRX6P78412 446 aaPredicted RBP27.31■■□□□ 1.96
YBX1-203ENST00000436427 BCL11BQ9C0K0 894 aaPredicted RBP27.31■■□□□ 1.96
YBX1-203ENST00000436427 CHPF2Q9P2E5 772 aa27.31■■□□□ 1.96
YBX1-203ENST00000436427 TRIM37O94972 964 aa27.3■■□□□ 1.96
YBX1-203ENST00000436427 ZKSCAN2Q63HK3 967 aa27.29■■□□□ 1.96
YBX1-203ENST00000436427 DBF4Q9UBU7 674 aaPredicted RBP27.29■■□□□ 1.96
YBX1-203ENST00000436427 EP400Q96L91 3159 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms