RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 PKP1Q13835 747 aa12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 GAS2L3Q86XJ1 694 aa12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 ABTB2Q8N961 1025 aa12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 NWD1Q149M9 1564 aa12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 RABEP1Q15276 862 aa12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 STK31Q9BXU1 1019 aa12.82□□□□□ -0.36
CLSTN1-203ENST00000435891 GNAI2P04899 355 aa12.81□□□□□ -0.36
CLSTN1-203ENST00000435891 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
CLSTN1-203ENST00000435891 GBP4Q96PP9 640 aa12.81□□□□□ -0.36
CLSTN1-203ENST00000435891 HMMRO75330 724 aa12.81□□□□□ -0.36
CLSTN1-203ENST00000435891 THEMISQ8N1K5 641 aaPredicted RBP12.81□□□□□ -0.36
CLSTN1-203ENST00000435891 MARF1Q9Y4F3 1742 aaKnown RBP12.8□□□□□ -0.36
CLSTN1-203ENST00000435891 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
CLSTN1-203ENST00000435891 PHAXQ9H814 394 aaKnown RBP12.8□□□□□ -0.36
CLSTN1-203ENST00000435891 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
CLSTN1-203ENST00000435891 PDE4CQ08493 712 aa12.79□□□□□ -0.36
CLSTN1-203ENST00000435891 CCDC30Q5VVM6 783 aa12.79□□□□□ -0.36
CLSTN1-203ENST00000435891 OSBPL3Q9H4L5 887 aa12.79□□□□□ -0.36
CLSTN1-203ENST00000435891 GRPEL1Q9HAV7 217 aa12.79□□□□□ -0.36
CLSTN1-203ENST00000435891 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
CLSTN1-203ENST00000435891 LRRC37A3O60309 1634 aa12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 XRN1Q8IZH2 1706 aaKnown RBP12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 BAG4O95429 457 aaKnown RBP12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 SETD1BQ9UPS6 1966 aaKnown RBP12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 ERC2O15083 957 aa12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 TRIM44Q96DX7 344 aaPredicted RBP12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
CLSTN1-203ENST00000435891 MRE11P49959 708 aa12.77□□□□□ -0.36
CLSTN1-203ENST00000435891 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.36
CLSTN1-203ENST00000435891 CASC1Q6TDU7 716 aa12.77□□□□□ -0.37
CLSTN1-203ENST00000435891 LRRCC1Q9C099 1032 aa12.77□□□□□ -0.37
CLSTN1-203ENST00000435891 ATP8B2P98198 1209 aa12.77□□□□□ -0.37
CLSTN1-203ENST00000435891 LGR6Q9HBX8 967 aa12.77□□□□□ -0.37
CLSTN1-203ENST00000435891 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 KCNQ3O43525 872 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 REC8O95072 547 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 IL1RAPL2Q9NP60 686 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 MX1P20591 662 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 IL25Q9H293 177 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 PALD1Q9ULE6 856 aa12.76□□□□□ -0.37
CLSTN1-203ENST00000435891 CYP2E1P05181 493 aaPredicted RBP12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 GNAI3P08754 354 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 FER1L4A9Z1Z3 1794 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 ANXA1P04083 346 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 RILPL2Q969X0 211 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 ZDHHC9Q9Y397 364 aa12.75□□□□□ -0.37
CLSTN1-203ENST00000435891 MCTP1Q6DN14 999 aa12.74□□□□□ -0.37
CLSTN1-203ENST00000435891 LRRC59Q96AG4 307 aaKnown RBP12.74□□□□□ -0.37
CLSTN1-203ENST00000435891 ESYT1Q9BSJ8 1104 aa12.74□□□□□ -0.37
CLSTN1-203ENST00000435891 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
CLSTN1-203ENST00000435891 ST18O60284 1047 aa12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 NEK4P51957 841 aa12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 SKOR2Q2VWA4 1001 aaPredicted RBP12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 NUTM1Q86Y26 1132 aa12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 UBTFL1P0CB47 393 aaPredicted RBP12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 CHMLP26374 656 aa12.73□□□□□ -0.37
CLSTN1-203ENST00000435891 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 MAP4K4O95819 1239 aaPredicted RBP12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 IP6K1Q92551 441 aa12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 ANO2Q9NQ90 1003 aa12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 CEMIPQ8WUJ3 1361 aa12.72□□□□□ -0.37
CLSTN1-203ENST00000435891 LTN1O94822 1766 aa12.71□□□□□ -0.37
CLSTN1-203ENST00000435891 FGD1P98174 961 aa12.71□□□□□ -0.37
CLSTN1-203ENST00000435891 LMBRD1Q9NUN5 540 aa12.71□□□□□ -0.37
CLSTN1-203ENST00000435891 NUCB2P80303 420 aa12.71□□□□□ -0.37
CLSTN1-203ENST00000435891 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
CLSTN1-203ENST00000435891 CLCN1P35523 988 aa12.71□□□□□ -0.38
CLSTN1-203ENST00000435891 MPRIPQ6WCQ1 1025 aa12.71□□□□□ -0.38
CLSTN1-203ENST00000435891 SSH3Q8TE77 659 aa12.71□□□□□ -0.38
CLSTN1-203ENST00000435891 TMX3Q96JJ7 454 aa12.71□□□□□ -0.38
CLSTN1-203ENST00000435891 STAP2Q9UGK3 403 aa12.71□□□□□ -0.38
CLSTN1-203ENST00000435891 GOLGA6L22H0YM25 854 aa12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms