RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 ITPK1Q13572 414 aa24.23■■□□□ 1.47
CLOCK-203ENST00000435527 GAS2L2Q8NHY3 880 aa24.23■■□□□ 1.47
CLOCK-203ENST00000435527 SLC4A9Q96Q91 983 aa24.23■■□□□ 1.47
CLOCK-203ENST00000435527 SLC52A2Q9HAB3 445 aa24.23■■□□□ 1.47
CLOCK-203ENST00000435527 ATP6V1AP38606 617 aa24.22■■□□□ 1.47
CLOCK-203ENST00000435527 PTGER2P43116 358 aa24.22■■□□□ 1.47
CLOCK-203ENST00000435527 MTFR1LQ9H019 292 aa24.22■■□□□ 1.47
CLOCK-203ENST00000435527 LINC00116Q8NCU8 138 aa24.21■■□□□ 1.47
CLOCK-203ENST00000435527 GNAT3A8MTJ3 354 aa24.2■■□□□ 1.46
CLOCK-203ENST00000435527 COL23A1Q86Y22 540 aaPredicted RBP24.2■■□□□ 1.46
CLOCK-203ENST00000435527 IL17REQ8NFR9 667 aa24.2■■□□□ 1.46
CLOCK-203ENST00000435527 SLC16A10Q8TF71 515 aa24.2■■□□□ 1.46
CLOCK-203ENST00000435527 SGIP1Q9BQI5 828 aa24.2■■□□□ 1.46
CLOCK-203ENST00000435527 RBM42Q9BTD8 480 aaKnown RBP24.19■■□□□ 1.46
CLOCK-203ENST00000435527 SCN11AQ9UI33 1791 aa24.17■■□□□ 1.46
CLOCK-203ENST00000435527 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
CLOCK-203ENST00000435527 MYBBP1AQ9BQG0 1328 aaKnown RBP24.16■■□□□ 1.46
CLOCK-203ENST00000435527 ZNF316A6NFI3 1004 aaPredicted RBP24.16■■□□□ 1.46
CLOCK-203ENST00000435527 PTCD1O75127 700 aaKnown RBP24.16■■□□□ 1.46
CLOCK-203ENST00000435527 AMIGO3Q86WK7 504 aa24.16■■□□□ 1.46
CLOCK-203ENST00000435527 TAF1LQ8IZX4 1826 aa24.16■■□□□ 1.46
CLOCK-203ENST00000435527 C5P01031 1676 aa24.15■■□□□ 1.46
CLOCK-203ENST00000435527 FLAD1Q8NFF5 587 aa24.15■■□□□ 1.46
CLOCK-203ENST00000435527 AK7Q96M32 723 aa24.15■■□□□ 1.46
CLOCK-203ENST00000435527 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
CLOCK-203ENST00000435527 QSER1Q2KHR3 1735 aa24.15■■□□□ 1.46
CLOCK-203ENST00000435527 ADAMTS7Q9UKP4 1686 aa24.15■■□□□ 1.46
CLOCK-203ENST00000435527 SLC39A6Q13433 755 aa24.14■■□□□ 1.45
CLOCK-203ENST00000435527 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
CLOCK-203ENST00000435527 PPP1R1BQ9UD71 204 aaPredicted RBP24.14■■□□□ 1.45
CLOCK-203ENST00000435527 MRC1P22897 1456 aa24.13■■□□□ 1.45
CLOCK-203ENST00000435527 PLEKHF1Q96S99 279 aa24.13■■□□□ 1.45
CLOCK-203ENST00000435527 C4BP0C0L5 1744 aa24.13■■□□□ 1.45
CLOCK-203ENST00000435527 MSH5O43196 834 aa24.12■■□□□ 1.45
CLOCK-203ENST00000435527 RC3H1Q5TC82 1133 aaKnown RBP24.12■■□□□ 1.45
CLOCK-203ENST00000435527 TUBGCP6Q96RT7 1819 aa24.12■■□□□ 1.45
CLOCK-203ENST00000435527 TEFQ10587 303 aa24.1■■□□□ 1.45
CLOCK-203ENST00000435527 CEMIPQ8WUJ3 1361 aa24.1■■□□□ 1.45
CLOCK-203ENST00000435527 ZNF831Q5JPB2 1677 aa24.09■■□□□ 1.45
CLOCK-203ENST00000435527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.09■■□□□ 1.45
CLOCK-203ENST00000435527 SSFA2P28290 1259 aa24.09■■□□□ 1.45
CLOCK-203ENST00000435527 GNPATO15228 680 aa24.08■■□□□ 1.45
CLOCK-203ENST00000435527 HTATSF1O43719 755 aaKnown RBP24.08■■□□□ 1.45
CLOCK-203ENST00000435527 ARXQ96QS3 562 aa24.08■■□□□ 1.45
CLOCK-203ENST00000435527 CNTNAP4Q9C0A0 1308 aa24.08■■□□□ 1.44
CLOCK-203ENST00000435527 PHF14O94880 888 aa24.07■■□□□ 1.44
CLOCK-203ENST00000435527 PNNQ9H307 717 aaKnown RBP24.07■■□□□ 1.44
CLOCK-203ENST00000435527 RPS6KA4O75676 772 aa24.06■■□□□ 1.44
CLOCK-203ENST00000435527 MCM10Q7L590 875 aa24.06■■□□□ 1.44
CLOCK-203ENST00000435527 RTF1Q92541 710 aaKnown RBP24.06■■□□□ 1.44
CLOCK-203ENST00000435527 DCTN1Q14203 1278 aa24.05■■□□□ 1.44
CLOCK-203ENST00000435527 DNAJC10Q8IXB1 793 aa24.05■■□□□ 1.44
CLOCK-203ENST00000435527 RTCBQ9Y3I0 505 aaKnown RBP24.05■■□□□ 1.44
CLOCK-203ENST00000435527 NEFMP07197 916 aa24.04■■□□□ 1.44
CLOCK-203ENST00000435527 POLD1P28340 1107 aa24.04■■□□□ 1.44
CLOCK-203ENST00000435527 CRKLP46109 303 aaKnown RBP24.04■■□□□ 1.44
CLOCK-203ENST00000435527 ZNF790Q6PG37 636 aa24.04■■□□□ 1.44
CLOCK-203ENST00000435527 VSIG10Q8N0Z9 540 aa24.04■■□□□ 1.44
CLOCK-203ENST00000435527 VIRMAQ69YN4 1812 aaKnown RBP24.04■■□□□ 1.44
CLOCK-203ENST00000435527 UBR3Q6ZT12 1888 aa24.04■■□□□ 1.44
CLOCK-203ENST00000435527 TRAPPC3LQ5T215 181 aa24.03■■□□□ 1.44
CLOCK-203ENST00000435527 MSL1Q68DK7 614 aa24.03■■□□□ 1.44
CLOCK-203ENST00000435527 INTS5Q6P9B9 1019 aaKnown RBP24.03■■□□□ 1.44
CLOCK-203ENST00000435527 SYT17Q9BSW7 474 aa24.03■■□□□ 1.44
CLOCK-203ENST00000435527 FHDC1Q9C0D6 1143 aaPredicted RBP24.03■■□□□ 1.44
CLOCK-203ENST00000435527 COL24A1Q17RW2 1714 aa24.02■■□□□ 1.44
CLOCK-203ENST00000435527 KCPQ6ZWJ8 1503 aa24.02■■□□□ 1.44
CLOCK-203ENST00000435527 NFE2L2Q16236 605 aa24.02■■□□□ 1.44
CLOCK-203ENST00000435527 TTC5Q8N0Z6 440 aa24.02■■□□□ 1.44
CLOCK-203ENST00000435527 ARHGEF1Q92888 912 aaKnown RBP24.02■■□□□ 1.44
CLOCK-203ENST00000435527 ZNF496Q96IT1 587 aaPredicted RBP24.02■■□□□ 1.44
CLOCK-203ENST00000435527 BTBD11A6QL63 1104 aa24.01■■□□□ 1.43
CLOCK-203ENST00000435527 KCNQ3O43525 872 aa24.01■■□□□ 1.43
CLOCK-203ENST00000435527 CYP19A1P11511 503 aaPredicted RBP24.01■■□□□ 1.43
CLOCK-203ENST00000435527 ADRA2BP18089 450 aa24■■□□□ 1.43
CLOCK-203ENST00000435527 COL5A3P25940 1745 aaPredicted RBP23.99■■□□□ 1.43
CLOCK-203ENST00000435527 MYH14Q7Z406 1995 aaKnown RBP23.99■■□□□ 1.43
CLOCK-203ENST00000435527 CCDC87Q9NVE4 849 aa23.98■■□□□ 1.43
CLOCK-203ENST00000435527 ADAMTS8Q9UP79 889 aa23.98■■□□□ 1.43
CLOCK-203ENST00000435527 MAPK8IP3Q9UPT6 1336 aa23.98■■□□□ 1.43
CLOCK-203ENST00000435527 TJP1Q07157 1748 aa23.98■■□□□ 1.43
CLOCK-203ENST00000435527 SIPA1L3O60292 1781 aaPredicted RBP23.97■■□□□ 1.43
CLOCK-203ENST00000435527 TAF7Q15545 349 aaPredicted RBP23.97■■□□□ 1.43
CLOCK-203ENST00000435527 CICQ96RK0 1608 aaPredicted RBP23.97■■□□□ 1.43
CLOCK-203ENST00000435527 HEG1Q9ULI3 1381 aa23.96■■□□□ 1.43
CLOCK-203ENST00000435527 FMNL2Q96PY5 1086 aa23.96■■□□□ 1.43
CLOCK-203ENST00000435527 RFC4P35249 363 aa23.95■■□□□ 1.42
CLOCK-203ENST00000435527 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
CLOCK-203ENST00000435527 TEX13AQ9BXU3 409 aaPredicted RBP23.95■■□□□ 1.42
CLOCK-203ENST00000435527 UBR2Q8IWV8 1755 aa23.94■■□□□ 1.42
CLOCK-203ENST00000435527 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
CLOCK-203ENST00000435527 RIPK4P57078 832 aa23.94■■□□□ 1.42
CLOCK-203ENST00000435527 STARD3NLO95772 234 aa23.93■■□□□ 1.42
CLOCK-203ENST00000435527 GYS1P13807 737 aa23.93■■□□□ 1.42
CLOCK-203ENST00000435527 CCDC146Q8IYE0 955 aa23.93■■□□□ 1.42
CLOCK-203ENST00000435527 THUMPD2Q9BTF0 503 aaKnown RBP23.93■■□□□ 1.42
CLOCK-203ENST00000435527 MIS18AQ9NYP9 233 aa23.93■■□□□ 1.42
CLOCK-203ENST00000435527 ZBTB1Q9Y2K1 713 aa23.93■■□□□ 1.42
CLOCK-203ENST00000435527 SOS1Q07889 1333 aaPredicted RBP23.92■■□□□ 1.42
CLOCK-203ENST00000435527 CCDC184Q52MB2 194 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms