RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-213ENST00000434795 HMOX1P09601 288 aa24.2■■□□□ 1.46
CPNE1-213ENST00000434795 NFATC2IPQ8NCF5 419 aa24.2■■□□□ 1.46
CPNE1-213ENST00000434795 KDM6AO15550 1401 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-213ENST00000434795 YY1P25490 414 aa24.19■■□□□ 1.46
CPNE1-213ENST00000434795 TUBGCP6Q96RT7 1819 aa24.19■■□□□ 1.46
CPNE1-213ENST00000434795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.18■■□□□ 1.46
CPNE1-213ENST00000434795 MSL1Q68DK7 614 aa24.18■■□□□ 1.46
CPNE1-213ENST00000434795 AKAP4Q5JQC9 854 aa24.17■■□□□ 1.46
CPNE1-213ENST00000434795 RBM42Q9BTD8 480 aaKnown RBP24.17■■□□□ 1.46
CPNE1-213ENST00000434795 COL24A1Q17RW2 1714 aa24.17■■□□□ 1.46
CPNE1-213ENST00000434795 C5P01031 1676 aa24.17■■□□□ 1.46
CPNE1-213ENST00000434795 SSFA2P28290 1259 aa24.16■■□□□ 1.46
CPNE1-213ENST00000434795 LGR6Q9HBX8 967 aa24.16■■□□□ 1.46
CPNE1-213ENST00000434795 UTRNP46939 3433 aa24.16■■□□□ 1.46
CPNE1-213ENST00000434795 TAF1LQ8IZX4 1826 aa24.15■■□□□ 1.46
CPNE1-213ENST00000434795 PHF14O94880 888 aa24.15■■□□□ 1.46
CPNE1-213ENST00000434795 KLHL34Q8N239 644 aa24.15■■□□□ 1.46
CPNE1-213ENST00000434795 C4BP0C0L5 1744 aa24.14■■□□□ 1.45
CPNE1-213ENST00000434795 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
CPNE1-213ENST00000434795 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
CPNE1-213ENST00000434795 GNPATO15228 680 aa24.13■■□□□ 1.45
CPNE1-213ENST00000434795 NLGN2Q8NFZ4 835 aa24.13■■□□□ 1.45
CPNE1-213ENST00000434795 RNMTO43148 476 aaKnown RBP24.11■■□□□ 1.45
CPNE1-213ENST00000434795 PTCD1O75127 700 aaKnown RBP24.11■■□□□ 1.45
CPNE1-213ENST00000434795 GPR162Q16538 588 aa24.1■■□□□ 1.45
CPNE1-213ENST00000434795 TRAPPC3LQ5T215 181 aa24.1■■□□□ 1.45
CPNE1-213ENST00000434795 SLC52A2Q9HAB3 445 aa24.1■■□□□ 1.45
CPNE1-213ENST00000434795 U2SURPO15042 1029 aaKnown RBP24.09■■□□□ 1.45
CPNE1-213ENST00000434795 RTCBQ9Y3I0 505 aaKnown RBP24.09■■□□□ 1.45
CPNE1-213ENST00000434795 CD2APQ9Y5K6 639 aa24.09■■□□□ 1.45
CPNE1-213ENST00000434795 RPS6KA4O75676 772 aa24.08■■□□□ 1.45
CPNE1-213ENST00000434795 ARHGEF1Q92888 912 aaKnown RBP24.07■■□□□ 1.44
CPNE1-213ENST00000434795 COL3A1P02461 1466 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-213ENST00000434795 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
CPNE1-213ENST00000434795 CNTNAP4Q9C0A0 1308 aa24.06■■□□□ 1.44
CPNE1-213ENST00000434795 UBR3Q6ZT12 1888 aa24.05■■□□□ 1.44
CPNE1-213ENST00000434795 ADRA2BP18089 450 aa24.03■■□□□ 1.44
CPNE1-213ENST00000434795 SLC39A6Q13433 755 aa24.03■■□□□ 1.44
CPNE1-213ENST00000434795 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
CPNE1-213ENST00000434795 GOLGB1Q14789 3259 aaKnown RBP24.03■■□□□ 1.44
CPNE1-213ENST00000434795 CRKLP46109 303 aaKnown RBP24.02■■□□□ 1.44
CPNE1-213ENST00000434795 NLGN1Q8N2Q7 840 aa24.02■■□□□ 1.44
CPNE1-213ENST00000434795 IL17REQ8NFR9 667 aa24.02■■□□□ 1.44
CPNE1-213ENST00000434795 INTS5Q6P9B9 1019 aaKnown RBP24.01■■□□□ 1.43
CPNE1-213ENST00000434795 PELP1Q8IZL8 1130 aaKnown RBP24.01■■□□□ 1.43
CPNE1-213ENST00000434795 PHACTR3Q96KR7 559 aa24.01■■□□□ 1.43
CPNE1-213ENST00000434795 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
CPNE1-213ENST00000434795 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.432e-6■■■■□ 21.8
CPNE1-213ENST00000434795 RFC4P35249 363 aa24■■□□□ 1.43
CPNE1-213ENST00000434795 GNAT3A8MTJ3 354 aa23.99■■□□□ 1.43
CPNE1-213ENST00000434795 MMP10P09238 476 aa23.99■■□□□ 1.43
CPNE1-213ENST00000434795 GYS1P13807 737 aa23.99■■□□□ 1.43
CPNE1-213ENST00000434795 DNAJC10Q8IXB1 793 aa23.99■■□□□ 1.43
CPNE1-213ENST00000434795 GAS2L2Q8NHY3 880 aa23.99■■□□□ 1.43
CPNE1-213ENST00000434795 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
CPNE1-213ENST00000434795 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
CPNE1-213ENST00000434795 SCN11AQ9UI33 1791 aa23.98■■□□□ 1.43
CPNE1-213ENST00000434795 GRIN3BO60391 1043 aa23.97■■□□□ 1.43
CPNE1-213ENST00000434795 CYP19A1P11511 503 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-213ENST00000434795 PRKAR2BP31323 418 aa23.96■■□□□ 1.43
CPNE1-213ENST00000434795 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-213ENST00000434795 FCHSD2O94868 740 aa23.95■■□□□ 1.42
CPNE1-213ENST00000434795 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
CPNE1-213ENST00000434795 MYH14Q7Z406 1995 aaKnown RBP23.94■■□□□ 1.42
CPNE1-213ENST00000434795 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-213ENST00000434795 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.422e-6■□□□□ 8.5
CPNE1-213ENST00000434795 CCDC87Q9NVE4 849 aa23.94■■□□□ 1.42
CPNE1-213ENST00000434795 MRC1P22897 1456 aa23.94■■□□□ 1.42
CPNE1-213ENST00000434795 SRP68Q9UHB9 627 aaKnown RBP23.92■■□□□ 1.42
CPNE1-213ENST00000434795 COL5A3P25940 1745 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-213ENST00000434795 TEFQ10587 303 aa23.91■■□□□ 1.42
CPNE1-213ENST00000434795 ADAMTS7Q9UKP4 1686 aa23.91■■□□□ 1.42
CPNE1-213ENST00000434795 FKBP8Q14318 412 aa23.9■■□□□ 1.42
CPNE1-213ENST00000434795 ZNF790Q6PG37 636 aa23.9■■□□□ 1.42
CPNE1-213ENST00000434795 USP42Q9H9J4 1324 aaKnown RBP23.89■■□□□ 1.42
CPNE1-213ENST00000434795 ZNF496Q96IT1 587 aaPredicted RBP23.89■■□□□ 1.41
CPNE1-213ENST00000434795 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
CPNE1-213ENST00000434795 SOS1Q07889 1333 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-213ENST00000434795 TM4SF1P30408 202 aa23.88■■□□□ 1.41
CPNE1-213ENST00000434795 TGFB2P61812 414 aa23.88■■□□□ 1.41
CPNE1-213ENST00000434795 TTC5Q8N0Z6 440 aa23.88■■□□□ 1.41
CPNE1-213ENST00000434795 PARP3Q9Y6F1 533 aa23.88■■□□□ 1.41
CPNE1-213ENST00000434795 KCPQ6ZWJ8 1503 aa23.88■■□□□ 1.41
CPNE1-213ENST00000434795 ZBTB1Q9Y2K1 713 aa23.86■■□□□ 1.41
CPNE1-213ENST00000434795 TJP1Q07157 1748 aa23.86■■□□□ 1.41
CPNE1-213ENST00000434795 CHD4Q14839 1912 aa23.86■■□□□ 1.41
CPNE1-213ENST00000434795 A0A0G2JLW4 131 aa23.85■■□□□ 1.41
CPNE1-213ENST00000434795 KCNQ3O43525 872 aa23.85■■□□□ 1.41
CPNE1-213ENST00000434795 ZPR1O75312 459 aa23.85■■□□□ 1.41
CPNE1-213ENST00000434795 STARD3NLO95772 234 aa23.85■■□□□ 1.41
CPNE1-213ENST00000434795 USPL1Q5W0Q7 1092 aa23.85■■□□□ 1.41
CPNE1-213ENST00000434795 TEX13AQ9BXU3 409 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-213ENST00000434795 NARFQ9UHQ1 456 aa23.85■■□□□ 1.41
CPNE1-213ENST00000434795 WWC3Q9ULE0 1092 aa23.85■■□□□ 1.41
CPNE1-213ENST00000434795 BTBD11A6QL63 1104 aa23.84■■□□□ 1.41
CPNE1-213ENST00000434795 DDR1Q08345 913 aa23.84■■□□□ 1.41
CPNE1-213ENST00000434795 CICQ96RK0 1608 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-213ENST00000434795 HTATSF1O43719 755 aaKnown RBP23.83■■□□□ 1.41
CPNE1-213ENST00000434795 CANXP27824 592 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms