RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
CDC42EP1-204ENST00000434728 CEP350Q5VT06 3117 aa18.39■□□□□ 0.53
CDC42EP1-204ENST00000434728 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
CDC42EP1-204ENST00000434728 ITPK1Q13572 414 aa18.39■□□□□ 0.53
CDC42EP1-204ENST00000434728 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
CDC42EP1-204ENST00000434728 MMP10P09238 476 aa18.38■□□□□ 0.53
CDC42EP1-204ENST00000434728 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
CDC42EP1-204ENST00000434728 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP1-204ENST00000434728 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
CDC42EP1-204ENST00000434728 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDC42EP1-204ENST00000434728 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP1-204ENST00000434728 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
CDC42EP1-204ENST00000434728 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
CDC42EP1-204ENST00000434728 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
CDC42EP1-204ENST00000434728 ERVV-2B6SEH9 535 aa18.35■□□□□ 0.53
CDC42EP1-204ENST00000434728 CABP4P57796 275 aa18.35■□□□□ 0.53
CDC42EP1-204ENST00000434728 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
CDC42EP1-204ENST00000434728 ADCY9O60503 1353 aa18.34■□□□□ 0.53
CDC42EP1-204ENST00000434728 RFC4P35249 363 aa18.34■□□□□ 0.53
CDC42EP1-204ENST00000434728 NLGN1Q8N2Q7 840 aa18.34■□□□□ 0.53
CDC42EP1-204ENST00000434728 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
CDC42EP1-204ENST00000434728 MORC1Q86VD1 984 aa18.33■□□□□ 0.52
CDC42EP1-204ENST00000434728 PANK3Q9H999 370 aa18.33■□□□□ 0.52
CDC42EP1-204ENST00000434728 CICQ96RK0 1608 aaPredicted RBP18.33■□□□□ 0.52
CDC42EP1-204ENST00000434728 KDRP35968 1356 aa18.32■□□□□ 0.52
CDC42EP1-204ENST00000434728 ADRA2BP18089 450 aa18.32■□□□□ 0.52
CDC42EP1-204ENST00000434728 CCDC87Q9NVE4 849 aa18.32■□□□□ 0.52
CDC42EP1-204ENST00000434728 BCS1LQ9Y276 419 aa18.32■□□□□ 0.52
CDC42EP1-204ENST00000434728 MTHFSP49914 203 aa18.31■□□□□ 0.52
CDC42EP1-204ENST00000434728 PARP3Q9Y6F1 533 aa18.31■□□□□ 0.52
CDC42EP1-204ENST00000434728 N4BP2Q86UW6 1770 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP1-204ENST00000434728 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
CDC42EP1-204ENST00000434728 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
CDC42EP1-204ENST00000434728 TGFB2P61812 414 aa18.3■□□□□ 0.52
CDC42EP1-204ENST00000434728 RC3H1Q5TC82 1133 aaKnown RBP18.3■□□□□ 0.52
CDC42EP1-204ENST00000434728 ZNF831Q5JPB2 1677 aa18.3■□□□□ 0.52
CDC42EP1-204ENST00000434728 COL5A3P25940 1745 aaPredicted RBP18.29■□□□□ 0.52
CDC42EP1-204ENST00000434728 CNTNAP4Q9C0A0 1308 aa18.29■□□□□ 0.52
CDC42EP1-204ENST00000434728 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
CDC42EP1-204ENST00000434728 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
CDC42EP1-204ENST00000434728 A0A0G2JLW4 131 aa18.29■□□□□ 0.52
CDC42EP1-204ENST00000434728 ARHGEF1Q92888 912 aaKnown RBP18.29■□□□□ 0.52
CDC42EP1-204ENST00000434728 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
CDC42EP1-204ENST00000434728 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
CDC42EP1-204ENST00000434728 HSPA6P17066 643 aa18.28■□□□□ 0.52
CDC42EP1-204ENST00000434728 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
CDC42EP1-204ENST00000434728 KDM6AO15550 1401 aaPredicted RBP18.27■□□□□ 0.52
CDC42EP1-204ENST00000434728 FCHSD2O94868 740 aa18.27■□□□□ 0.52
CDC42EP1-204ENST00000434728 ARHGAP27Q6ZUM4 889 aa18.27■□□□□ 0.52
CDC42EP1-204ENST00000434728 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
CDC42EP1-204ENST00000434728 C10orf71Q711Q0 1435 aa18.26■□□□□ 0.51
CDC42EP1-204ENST00000434728 GYS1P13807 737 aa18.26■□□□□ 0.51
CDC42EP1-204ENST00000434728 SULT6B1Q6IMI4 303 aa18.26■□□□□ 0.51
CDC42EP1-204ENST00000434728 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
CDC42EP1-204ENST00000434728 CRKLP46109 303 aaKnown RBP18.25■□□□□ 0.51
CDC42EP1-204ENST00000434728 NFATC2IPQ8NCF5 419 aa18.25■□□□□ 0.51
CDC42EP1-204ENST00000434728 DPEP1P16444 411 aa18.24■□□□□ 0.51
CDC42EP1-204ENST00000434728 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
CDC42EP1-204ENST00000434728 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
CDC42EP1-204ENST00000434728 KIAA1551Q9HCM1 1747 aa18.23■□□□□ 0.51
CDC42EP1-204ENST00000434728 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP1-204ENST00000434728 KIF3CO14782 793 aa18.21■□□□□ 0.51
CDC42EP1-204ENST00000434728 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
CDC42EP1-204ENST00000434728 SCN11AQ9UI33 1791 aa18.21■□□□□ 0.51
CDC42EP1-204ENST00000434728 ZPR1O75312 459 aa18.2■□□□□ 0.5
CDC42EP1-204ENST00000434728 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
CDC42EP1-204ENST00000434728 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP1-204ENST00000434728 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
CDC42EP1-204ENST00000434728 USP42Q9H9J4 1324 aaKnown RBP18.2■□□□□ 0.5
CDC42EP1-204ENST00000434728 BRCA1P38398 1863 aaKnown RBP18.19■□□□□ 0.5
CDC42EP1-204ENST00000434728 AKAP4Q5JQC9 854 aa18.19■□□□□ 0.5
CDC42EP1-204ENST00000434728 TJP1Q07157 1748 aa18.18■□□□□ 0.5
CDC42EP1-204ENST00000434728 FKBP8Q14318 412 aa18.18■□□□□ 0.5
CDC42EP1-204ENST00000434728 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
CDC42EP1-204ENST00000434728 ARFGEF1Q9Y6D6 1849 aa18.18■□□□□ 0.5
CDC42EP1-204ENST00000434728 TOMM70O94826 608 aa18.17■□□□□ 0.5
CDC42EP1-204ENST00000434728 IL13P35225 146 aa18.17■□□□□ 0.5
CDC42EP1-204ENST00000434728 APLP1P51693 650 aa18.17■□□□□ 0.5
CDC42EP1-204ENST00000434728 C9orf131Q5VYM1 1079 aa18.17■□□□□ 0.5
CDC42EP1-204ENST00000434728 HMOX1P09601 288 aa18.16■□□□□ 0.5
CDC42EP1-204ENST00000434728 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
CDC42EP1-204ENST00000434728 VIRMAQ69YN4 1812 aaKnown RBP18.15■□□□□ 0.5
CDC42EP1-204ENST00000434728 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
CDC42EP1-204ENST00000434728 NMRK2Q9NPI5 230 aa18.15■□□□□ 0.5
CDC42EP1-204ENST00000434728 DDR1Q08345 913 aa18.14■□□□□ 0.49
CDC42EP1-204ENST00000434728 USPL1Q5W0Q7 1092 aa18.14■□□□□ 0.49
CDC42EP1-204ENST00000434728 RNF181Q9P0P0 153 aa18.14■□□□□ 0.49
CDC42EP1-204ENST00000434728 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
CDC42EP1-204ENST00000434728 KCNA3P22001 575 aa18.13■□□□□ 0.49
CDC42EP1-204ENST00000434728 CHRNA5P30532 468 aa18.13■□□□□ 0.49
CDC42EP1-204ENST00000434728 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
CDC42EP1-204ENST00000434728 INTS5Q6P9B9 1019 aaKnown RBP18.13■□□□□ 0.49
CDC42EP1-204ENST00000434728 LGR6Q9HBX8 967 aa18.13■□□□□ 0.49
CDC42EP1-204ENST00000434728 POLRMTO00411 1230 aaKnown RBP18.12■□□□□ 0.49
CDC42EP1-204ENST00000434728 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
CDC42EP1-204ENST00000434728 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP1-204ENST00000434728 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
CDC42EP1-204ENST00000434728 SOS1Q07889 1333 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP1-204ENST00000434728 COL15A1P39059 1388 aa18.11■□□□□ 0.49
CDC42EP1-204ENST00000434728 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms