RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 ABCC4O15439 1325 aa12.77□□□□□ -0.37
SCAF4-203ENST00000434667 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.37
SCAF4-203ENST00000434667 TSPOAP1O95153 1857 aa12.76□□□□□ -0.37
SCAF4-203ENST00000434667 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
SCAF4-203ENST00000434667 CEP85Q6P2H3 762 aa12.76□□□□□ -0.37
SCAF4-203ENST00000434667 ANO2Q9NQ90 1003 aa12.76□□□□□ -0.37
SCAF4-203ENST00000434667 SLIT1O75093 1534 aa12.76□□□□□ -0.37
SCAF4-203ENST00000434667 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
SCAF4-203ENST00000434667 IL16Q14005 1332 aa12.76□□□□□ -0.37
SCAF4-203ENST00000434667 ZNF500O60304 480 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-203ENST00000434667 CPA1P15085 419 aa12.75□□□□□ -0.37
SCAF4-203ENST00000434667 UNC5CLQ8IV45 518 aa12.75□□□□□ -0.37
SCAF4-203ENST00000434667 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
SCAF4-203ENST00000434667 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCAF4-203ENST00000434667 MSH6P52701 1360 aa12.75□□□□□ -0.37
SCAF4-203ENST00000434667 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-203ENST00000434667 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
SCAF4-203ENST00000434667 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-203ENST00000434667 CRYBG1Q9Y4K1 1723 aa12.75□□□□□ -0.37
SCAF4-203ENST00000434667 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
SCAF4-203ENST00000434667 GNAI1P63096 354 aa12.74□□□□□ -0.37
SCAF4-203ENST00000434667 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
SCAF4-203ENST00000434667 HCLS1P14317 486 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-203ENST00000434667 CDK11BP21127 795 aaKnown RBP12.74□□□□□ -0.37
SCAF4-203ENST00000434667 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-203ENST00000434667 VGFO15240 615 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-203ENST00000434667 FOXO3O43524 673 aa12.74□□□□□ -0.37
SCAF4-203ENST00000434667 SPC24Q8NBT2 197 aa12.74□□□□□ -0.37
SCAF4-203ENST00000434667 PIK3C2AO00443 1686 aa12.73□□□□□ -0.37
SCAF4-203ENST00000434667 PTMSP20962 102 aa12.73□□□□□ -0.37
SCAF4-203ENST00000434667 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
SCAF4-203ENST00000434667 PIK3R4Q99570 1358 aa12.73□□□□□ -0.37
SCAF4-203ENST00000434667 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
SCAF4-203ENST00000434667 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
SCAF4-203ENST00000434667 IL1RAPL2Q9NP60 686 aa12.73□□□□□ -0.37
SCAF4-203ENST00000434667 RGPD8O14715 1765 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-203ENST00000434667 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
SCAF4-203ENST00000434667 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
SCAF4-203ENST00000434667 TSPY26PQ9H489 355 aa12.72□□□□□ -0.37
SCAF4-203ENST00000434667 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
SCAF4-203ENST00000434667 NWD1Q149M9 1564 aa12.72□□□□□ -0.37
SCAF4-203ENST00000434667 ERC2O15083 957 aa12.72□□□□□ -0.37
SCAF4-203ENST00000434667 DRC7Q8IY82 874 aa12.72□□□□□ -0.37
SCAF4-203ENST00000434667 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
SCAF4-203ENST00000434667 SULT6B1Q6IMI4 303 aa12.71□□□□□ -0.37
SCAF4-203ENST00000434667 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
SCAF4-203ENST00000434667 SASS6Q6UVJ0 657 aa12.71□□□□□ -0.37
SCAF4-203ENST00000434667 IFT57Q9NWB7 429 aa12.71□□□□□ -0.37
SCAF4-203ENST00000434667 FIBPO43427 364 aa12.71□□□□□ -0.38
SCAF4-203ENST00000434667 IL13P35225 146 aa12.71□□□□□ -0.38
SCAF4-203ENST00000434667 PDE1AP54750 535 aa12.71□□□□□ -0.38
SCAF4-203ENST00000434667 CFAP44Q96MT7 982 aa12.71□□□□□ -0.38
SCAF4-203ENST00000434667 ATP2B3Q16720 1220 aa12.7□□□□□ -0.38
SCAF4-203ENST00000434667 GIMAP6Q6P9H5 292 aa12.7□□□□□ -0.38
SCAF4-203ENST00000434667 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
SCAF4-203ENST00000434667 IBTKQ9P2D0 1353 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-203ENST00000434667 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
SCAF4-203ENST00000434667 ADCY5O95622 1261 aa12.7□□□□□ -0.38
SCAF4-203ENST00000434667 KIAA2012Q0VF49 1180 aa12.7□□□□□ -0.38
SCAF4-203ENST00000434667 NUTM1Q86Y26 1132 aa12.7□□□□□ -0.38
SCAF4-203ENST00000434667 AP5Z1O43299 807 aa12.69□□□□□ -0.38
SCAF4-203ENST00000434667 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-203ENST00000434667 ARHGAP45Q92619 1136 aa12.69□□□□□ -0.38
SCAF4-203ENST00000434667 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-203ENST00000434667 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
SCAF4-203ENST00000434667 PNMA6EA0A0J9YXQ4 647 aa12.69□□□□□ -0.38
SCAF4-203ENST00000434667 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
SCAF4-203ENST00000434667 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
SCAF4-203ENST00000434667 REC8O95072 547 aa12.69□□□□□ -0.38
SCAF4-203ENST00000434667 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
SCAF4-203ENST00000434667 BRD1O95696 1058 aa12.68□□□□□ -0.38
SCAF4-203ENST00000434667 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
SCAF4-203ENST00000434667 ATP10DQ9P241 1426 aa12.68□□□□□ -0.38
SCAF4-203ENST00000434667 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
SCAF4-203ENST00000434667 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
SCAF4-203ENST00000434667 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.382e-7■■□□□ 13.6
SCAF4-203ENST00000434667 FAM173BQ6P4H8 233 aa12.67□□□□□ -0.38
SCAF4-203ENST00000434667 DYNC1I1O14576 645 aa12.67□□□□□ -0.38
SCAF4-203ENST00000434667 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-203ENST00000434667 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
SCAF4-203ENST00000434667 PYCARDQ9ULZ3 195 aa12.67□□□□□ -0.38
SCAF4-203ENST00000434667 NPHP1O15259 732 aa12.67□□□□□ -0.38
SCAF4-203ENST00000434667 NAA30Q147X3 362 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-203ENST00000434667 AATKQ6ZMQ8 1374 aa12.67□□□□□ -0.38
SCAF4-203ENST00000434667 COL9A3Q14050 684 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-203ENST00000434667 ZNF592Q92610 1267 aa12.66□□□□□ -0.38
SCAF4-203ENST00000434667 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
SCAF4-203ENST00000434667 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
SCAF4-203ENST00000434667 SLC52A1Q9NWF4 448 aa12.66□□□□□ -0.38
SCAF4-203ENST00000434667 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
SCAF4-203ENST00000434667 TXNDC2Q86VQ3 553 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 OVOS2A0A0J9YW53 1432 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 OVOS2Q6IE36 1432 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 LMO7Q8WWI1 1683 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 TCHHQ07283 1943 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.383e-9■■■□□ 16.3
SCAF4-203ENST00000434667 CAMK4Q16566 473 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 LARGE1O95461 756 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms