RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 NLGN2Q8NFZ4 835 aa27.42■■□□□ 1.98
HLA-B-250ENST00000434333 DCAF5Q96JK2 942 aa27.42■■□□□ 1.98
HLA-B-250ENST00000434333 HSP90AB1P08238 724 aaKnown RBP27.41■■□□□ 1.98
HLA-B-250ENST00000434333 SULT6B1Q6IMI4 303 aa27.41■■□□□ 1.98
HLA-B-250ENST00000434333 ZNF831Q5JPB2 1677 aa27.4■■□□□ 1.98
HLA-B-250ENST00000434333 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
HLA-B-250ENST00000434333 ATP6V1AP38606 617 aa27.39■■□□□ 1.98
HLA-B-250ENST00000434333 MTHFSP49914 203 aa27.39■■□□□ 1.98
HLA-B-250ENST00000434333 SLC4A9Q96Q91 983 aa27.39■■□□□ 1.98
HLA-B-250ENST00000434333 CHD4Q14839 1912 aa27.38■■□□□ 1.97
HLA-B-250ENST00000434333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.38■■□□□ 1.97
HLA-B-250ENST00000434333 PHF14O94880 888 aa27.37■■□□□ 1.97
HLA-B-250ENST00000434333 SSFA2P28290 1259 aa27.37■■□□□ 1.97
HLA-B-250ENST00000434333 CC2D1BQ5T0F9 858 aaKnown RBP27.36■■□□□ 1.97
HLA-B-250ENST00000434333 COL5A3P25940 1745 aaPredicted RBP27.35■■□□□ 1.97
HLA-B-250ENST00000434333 GPR162Q16538 588 aa27.34■■□□□ 1.97
HLA-B-250ENST00000434333 NPC1L1Q9UHC9 1359 aa27.34■■□□□ 1.97
HLA-B-250ENST00000434333 SCN11AQ9UI33 1791 aa27.33■■□□□ 1.97
HLA-B-250ENST00000434333 GNPATO15228 680 aa27.33■■□□□ 1.97
HLA-B-250ENST00000434333 CABP4P57796 275 aa27.33■■□□□ 1.97
HLA-B-250ENST00000434333 C1orf141Q5JVX7 400 aa27.33■■□□□ 1.97
HLA-B-250ENST00000434333 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
HLA-B-250ENST00000434333 RBM42Q9BTD8 480 aaKnown RBP27.3■■□□□ 1.96
HLA-B-250ENST00000434333 CD2APQ9Y5K6 639 aa27.29■■□□□ 1.96
HLA-B-250ENST00000434333 HMOX1P09601 288 aa27.28■■□□□ 1.96
HLA-B-250ENST00000434333 ZNF784Q8NCA9 323 aaPredicted RBP27.28■■□□□ 1.96
HLA-B-250ENST00000434333 NFATC2IPQ8NCF5 419 aa27.28■■□□□ 1.96
HLA-B-250ENST00000434333 CICQ96RK0 1608 aaPredicted RBP27.27■■□□□ 1.96
HLA-B-250ENST00000434333 YBX3P16989 372 aaKnown RBP eCLIP27.27■■□□□ 1.96
HLA-B-250ENST00000434333 AKAP4Q5JQC9 854 aa27.27■■□□□ 1.96
HLA-B-250ENST00000434333 PELP1Q8IZL8 1130 aaKnown RBP27.27■■□□□ 1.96
HLA-B-250ENST00000434333 MYH14Q7Z406 1995 aaKnown RBP27.26■■□□□ 1.95
HLA-B-250ENST00000434333 CNTNAP4Q9C0A0 1308 aa27.26■■□□□ 1.95
HLA-B-250ENST00000434333 DIAPH1O60610 1272 aaKnown RBP27.26■■□□□ 1.95
HLA-B-250ENST00000434333 RC3H1Q5TC82 1133 aaKnown RBP27.26■■□□□ 1.95
HLA-B-250ENST00000434333 TJP1Q07157 1748 aa27.25■■□□□ 1.95
HLA-B-250ENST00000434333 ADAMTS7Q9UKP4 1686 aa27.25■■□□□ 1.95
HLA-B-250ENST00000434333 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
HLA-B-250ENST00000434333 MRC1P22897 1456 aa27.25■■□□□ 1.95
HLA-B-250ENST00000434333 RTCBQ9Y3I0 505 aaKnown RBP27.24■■□□□ 1.95
HLA-B-250ENST00000434333 PTCD1O75127 700 aaKnown RBP27.23■■□□□ 1.95
HLA-B-250ENST00000434333 LGR6Q9HBX8 967 aa27.23■■□□□ 1.95
HLA-B-250ENST00000434333 C4AP0C0L4 1744 aa27.21■■□□□ 1.95
HLA-B-250ENST00000434333 RPS6KA4O75676 772 aa27.21■■□□□ 1.95
HLA-B-250ENST00000434333 CNGB1Q14028 1251 aaPredicted RBP27.21■■□□□ 1.95
HLA-B-250ENST00000434333 MTHFSDQ2M296 383 aaKnown RBP27.21■■□□□ 1.95
HLA-B-250ENST00000434333 TRAPPC3LQ5T215 181 aa27.21■■□□□ 1.95
HLA-B-250ENST00000434333 SLC52A2Q9HAB3 445 aa27.21■■□□□ 1.95
HLA-B-250ENST00000434333 ARHGEF1Q92888 912 aaKnown RBP27.2■■□□□ 1.94
HLA-B-250ENST00000434333 RNMTO43148 476 aaKnown RBP27.19■■□□□ 1.94
HLA-B-250ENST00000434333 ADRA2BP18089 450 aa27.19■■□□□ 1.94
HLA-B-250ENST00000434333 GRIN3BO60391 1043 aa27.17■■□□□ 1.94
HLA-B-250ENST00000434333 MMP10P09238 476 aa27.17■■□□□ 1.94
HLA-B-250ENST00000434333 CRKLP46109 303 aaKnown RBP27.16■■□□□ 1.94
HLA-B-250ENST00000434333 KIF13BQ9NQT8 1826 aa27.16■■□□□ 1.94
HLA-B-250ENST00000434333 KIAA1551Q9HCM1 1747 aa27.16■■□□□ 1.94
HLA-B-250ENST00000434333 GYS1P13807 737 aa27.15■■□□□ 1.94
HLA-B-250ENST00000434333 KCPQ6ZWJ8 1503 aa27.15■■□□□ 1.94
HLA-B-250ENST00000434333 NLGN1Q8N2Q7 840 aa27.13■■□□□ 1.93
HLA-B-250ENST00000434333 U2SURPO15042 1029 aaKnown RBP27.12■■□□□ 1.93
HLA-B-250ENST00000434333 RFC4P35249 363 aa27.12■■□□□ 1.93
HLA-B-250ENST00000434333 SLC39A6Q13433 755 aa27.12■■□□□ 1.93
HLA-B-250ENST00000434333 INTS5Q6P9B9 1019 aaKnown RBP27.11■■□□□ 1.93
HLA-B-250ENST00000434333 DNAJC10Q8IXB1 793 aa27.11■■□□□ 1.93
HLA-B-250ENST00000434333 UBR2Q8IWV8 1755 aa27.11■■□□□ 1.93
HLA-B-250ENST00000434333 C10orf71Q711Q0 1435 aa27.1■■□□□ 1.93
HLA-B-250ENST00000434333 PXDNLA1KZ92 1463 aa27.1■■□□□ 1.93
HLA-B-250ENST00000434333 SRP68Q9UHB9 627 aaKnown RBP27.08■■□□□ 1.93
HLA-B-250ENST00000434333 WWC3Q9ULE0 1092 aa27.08■■□□□ 1.93
HLA-B-250ENST00000434333 USP42Q9H9J4 1324 aaKnown RBP27.08■■□□□ 1.93
HLA-B-250ENST00000434333 CYP19A1P11511 503 aaPredicted RBP27.06■■□□□ 1.92
HLA-B-250ENST00000434333 CCDC87Q9NVE4 849 aa27.06■■□□□ 1.92
HLA-B-250ENST00000434333 SIPA1L3O60292 1781 aaPredicted RBP27.06■■□□□ 1.92
HLA-B-250ENST00000434333 N4BP2Q86UW6 1770 aaPredicted RBP27.06■■□□□ 1.92
HLA-B-250ENST00000434333 IL17REQ8NFR9 667 aa27.05■■□□□ 1.92
HLA-B-250ENST00000434333 GAS2L2Q8NHY3 880 aa27.05■■□□□ 1.92
HLA-B-250ENST00000434333 PPP2R1AP30153 589 aa27.04■■□□□ 1.92
HLA-B-250ENST00000434333 RSPH6AQ9H0K4 717 aa27.04■■□□□ 1.92
HLA-B-250ENST00000434333 SOS1Q07889 1333 aaPredicted RBP27.04■■□□□ 1.92
HLA-B-250ENST00000434333 GNAT3A8MTJ3 354 aa27.03■■□□□ 1.92
HLA-B-250ENST00000434333 FKBP8Q14318 412 aa27.03■■□□□ 1.92
HLA-B-250ENST00000434333 TGFB2P61812 414 aa27.02■■□□□ 1.92
HLA-B-250ENST00000434333 VSIG10Q8N0Z9 540 aa27.02■■□□□ 1.92
HLA-B-250ENST00000434333 PHACTR3Q96KR7 559 aa27.02■■□□□ 1.92
HLA-B-250ENST00000434333 CFAP53Q96M91 514 aa27.02■■□□□ 1.92
HLA-B-250ENST00000434333 PARP3Q9Y6F1 533 aa27.02■■□□□ 1.92
HLA-B-250ENST00000434333 ADCY9O60503 1353 aa27.01■■□□□ 1.91
HLA-B-250ENST00000434333 PRKAR2BP31323 418 aa27.01■■□□□ 1.91
HLA-B-250ENST00000434333 ZBTB1Q9Y2K1 713 aa27.01■■□□□ 1.91
HLA-B-250ENST00000434333 BRCA1P38398 1863 aaKnown RBP27■■□□□ 1.91
HLA-B-250ENST00000434333 CEMIPQ8WUJ3 1361 aa27■■□□□ 1.91
HLA-B-250ENST00000434333 DDR1Q08345 913 aa27■■□□□ 1.91
HLA-B-250ENST00000434333 ATP10DQ9P241 1426 aa26.99■■□□□ 1.91
HLA-B-250ENST00000434333 COL15A1P39059 1388 aa26.98■■□□□ 1.91
HLA-B-250ENST00000434333 A0A0G2JLW4 131 aa26.98■■□□□ 1.91
HLA-B-250ENST00000434333 C1QTNF8P60827 252 aa26.97■■□□□ 1.91
HLA-B-250ENST00000434333 TEFQ10587 303 aa26.97■■□□□ 1.91
HLA-B-250ENST00000434333 USPL1Q5W0Q7 1092 aa26.97■■□□□ 1.91
HLA-B-250ENST00000434333 DPEP1P16444 411 aa26.96■■□□□ 1.91
HLA-B-250ENST00000434333 TM4SF1P30408 202 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms