RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 IDI1Q13907 227 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 MAP1BP46821 2468 aaKnown RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 PAXIP1Q6ZW49 1069 aaPredicted RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 GOLGA6L1Q8N7Z2 621 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 PHAXQ9H814 394 aaKnown RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 SPG7Q9UQ90 795 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 COL15A1P39059 1388 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 MSNP26038 577 aaKnown RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 PDCL2Q8N4E4 241 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 DBF4Q9UBU7 674 aaPredicted RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 SETD1AO15047 1707 aaKnown RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 GLRX3O76003 335 aaKnown RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 RPAP1Q9BWH6 1393 aaPredicted RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 TMPOP42166 694 aaKnown RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 C14orf37Q86TY3 774 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 CHD2O14647 1828 aaKnown RBP4.53□□□□□ -1.68
SHPRH-205ENST00000433355 APAF1O14727 1248 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 CCDC178Q5BJE1 867 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 SMYD5Q6GMV2 418 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 C22orf23Q9BZE7 217 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 USP25Q9UHP3 1055 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 SLIT3O75094 1523 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 COL3A1P02461 1466 aaPredicted RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 WASF1Q92558 559 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 PRAM1Q96QH2 718 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 RBM25P49756 843 aaKnown RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 SF3B2Q13435 895 aaKnown RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 ZFYP08048 801 aaPredicted RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 LRRC37A3O60309 1634 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 ADGRF5Q8IZF2 1346 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 FRAT1Q92837 279 aaPredicted RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 CTAGE5O15320 804 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 TWISTNBQ3B726 338 aaPredicted RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 CT47A1Q5JQC4 288 aaPredicted RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 CNTROBQ8N137 903 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 NBPF1Q3BBV0 1214 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 CLASRPQ8N2M8 674 aaKnown RBP4.52□□□□□ -1.69
SHPRH-205ENST00000433355 TBC1D32Q96NH3 1257 aa4.52□□□□□ -1.69
SHPRH-205ENST00000433355 UBTFL1P0CB47 393 aaPredicted RBP4.51□□□□□ -1.69
SHPRH-205ENST00000433355 TRAF1Q13077 416 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 SART3Q15020 963 aaKnown RBP4.51□□□□□ -1.69
SHPRH-205ENST00000433355 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.51□□□□□ -1.695e-7■■■■□ 19.8
SHPRH-205ENST00000433355 PNMA2Q9UL42 364 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 ZNF287Q9HBT7 754 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 CNGB1Q14028 1251 aaPredicted RBP4.51□□□□□ -1.69
SHPRH-205ENST00000433355 CLEC17AQ6ZS10 378 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 RAPGEF4Q8WZA2 1011 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC173Q0VFZ6 552 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 MTX1Q13505 466 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 OSBPL3Q9H4L5 887 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 PRKAR2BP31323 418 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 ANKRD20A12PQ8NF67 263 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 C19orf44Q9H6X5 657 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 LARP1Q6PKG0 1096 aaKnown RBP4.51□□□□□ -1.69
SHPRH-205ENST00000433355 LAS1LQ9Y4W2 734 aaKnown RBP4.51□□□□□ -1.69
SHPRH-205ENST00000433355 CPDO75976 1380 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC196A0A1B0GTZ2 297 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 GOLGA6L9A6NEM1 432 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 OS9Q13438 667 aaPredicted RBP4.51□□□□□ -1.69
SHPRH-205ENST00000433355 KLHL40Q2TBA0 621 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 TAF3Q5VWG9 929 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 FAM43AQ8N2R8 423 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 NUDT16Q96DE0 195 aaKnown RBP4.51□□□□□ -1.69
SHPRH-205ENST00000433355 CDK19Q9BWU1 502 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 CFAP45Q9UL16 551 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 WDR19Q8NEZ3 1342 aa4.51□□□□□ -1.69
SHPRH-205ENST00000433355 A0A087WZG4 1122 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 GNAT3A8MTJ3 354 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 TRAK1Q9UPV9 953 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 AKAP2Q9Y2D5 859 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 TTF1Q15361 905 aaPredicted RBP4.5□□□□□ -1.69
SHPRH-205ENST00000433355 GNL3LQ9NVN8 582 aaKnown RBP4.5□□□□□ -1.69
SHPRH-205ENST00000433355 PCP11498 1178 aaKnown RBP4.5□□□□□ -1.69
SHPRH-205ENST00000433355 NUCB1Q02818 461 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 LRRCC1Q9C099 1032 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 KIF1BPQ96EK5 621 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 XBP1P17861 261 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 IRX6P78412 446 aaPredicted RBP4.5□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC39Q9UFE4 941 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 DLG5Q8TDM6 1919 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 RBM26Q5T8P6 1007 aaKnown RBP4.5□□□□□ -1.69
SHPRH-205ENST00000433355 TM6SF1Q9BZW5 370 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 IGSF1Q8N6C5 1336 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 DDX11Q96FC9 970 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 RGS3P49796 1198 aa4.5□□□□□ -1.69
SHPRH-205ENST00000433355 CHD1LQ86WJ1 897 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 ZNF396Q96N95 335 aaPredicted RBP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 GLT8D2Q9H1C3 349 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 CICQ96RK0 1608 aaPredicted RBP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 MX1P20591 662 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 KCNJ4P48050 445 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 ANKRD44Q8N8A2 993 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 SIGLEC1Q9BZZ2 1709 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 GTF2F1P35269 517 aaKnown RBP eCLIP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 TXNDC2Q86VQ3 553 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 DCTPP1Q9H773 170 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 PCDH11XQ9BZA7 1347 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 PCDH11YQ9BZA8 1340 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 ATF3P18847 181 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 UVSSAQ2YD98 709 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms