RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TEFQ10587 303 aa24.66■■□□□ 1.54
VRK2-205ENST00000432057 CPDO75976 1380 aa24.65■■□□□ 1.54
VRK2-205ENST00000432057 MEGF6O75095 1541 aa24.65■■□□□ 1.54
VRK2-205ENST00000432057 RNMTO43148 476 aaKnown RBP24.65■■□□□ 1.54
VRK2-205ENST00000432057 SIRT2Q8IXJ6 389 aa24.64■■□□□ 1.53
VRK2-205ENST00000432057 SOS2Q07890 1332 aaPredicted RBP24.64■■□□□ 1.53
VRK2-205ENST00000432057 F6X3S4 739 aa24.62■■□□□ 1.53
VRK2-205ENST00000432057 CSB-PGBD3P0DP91 1061 aa24.62■■□□□ 1.53
VRK2-205ENST00000432057 ATP10DQ9P241 1426 aa24.62■■□□□ 1.53
VRK2-205ENST00000432057 KCNQ3O43525 872 aa24.62■■□□□ 1.53
VRK2-205ENST00000432057 EIF4A1P60842 406 aaKnown RBP24.62■■□□□ 1.53
VRK2-205ENST00000432057 RAPGEF4Q8WZA2 1011 aa24.62■■□□□ 1.53
VRK2-205ENST00000432057 NUCB1Q02818 461 aa24.61■■□□□ 1.53
VRK2-205ENST00000432057 FLIIQ13045 1269 aa24.61■■□□□ 1.53
VRK2-205ENST00000432057 BTBD11A6QL63 1104 aa24.6■■□□□ 1.53
VRK2-205ENST00000432057 HDGFL1Q5TGJ6 251 aa24.6■■□□□ 1.53
VRK2-205ENST00000432057 SLC4A10Q6U841 1118 aa24.6■■□□□ 1.53
VRK2-205ENST00000432057 PARP4Q9UKK3 1724 aaKnown RBP24.59■■□□□ 1.53
VRK2-205ENST00000432057 TATP17735 454 aaPredicted RBP24.59■■□□□ 1.53
VRK2-205ENST00000432057 GCC1Q96CN9 775 aa24.59■■□□□ 1.53
VRK2-205ENST00000432057 MEIS3Q99687 375 aa24.59■■□□□ 1.53
VRK2-205ENST00000432057 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
VRK2-205ENST00000432057 ERICH6Q7L0X2 663 aa24.58■■□□□ 1.53
VRK2-205ENST00000432057 FKBP5Q13451 457 aaPredicted RBP24.58■■□□□ 1.52
VRK2-205ENST00000432057 LNPKQ9C0E8 428 aa24.58■■□□□ 1.52
VRK2-205ENST00000432057 CCT4P50991 539 aaKnown RBP24.57■■□□□ 1.52
VRK2-205ENST00000432057 CHD1LQ86WJ1 897 aa24.57■■□□□ 1.52
VRK2-205ENST00000432057 KDM6AO15550 1401 aaPredicted RBP24.57■■□□□ 1.52
VRK2-205ENST00000432057 PXDNLA1KZ92 1463 aa24.56■■□□□ 1.52
VRK2-205ENST00000432057 C5P01031 1676 aa24.56■■□□□ 1.52
VRK2-205ENST00000432057 HOXB7P09629 217 aa24.55■■□□□ 1.52
VRK2-205ENST00000432057 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
VRK2-205ENST00000432057 ANKRD44Q8N8A2 993 aa24.54■■□□□ 1.52
VRK2-205ENST00000432057 SEC24BO95487 1268 aa24.53■■□□□ 1.52
VRK2-205ENST00000432057 ANKRD45Q5TZF3 282 aa24.53■■□□□ 1.52
VRK2-205ENST00000432057 PRDM11Q9NQV5 511 aa24.53■■□□□ 1.52
VRK2-205ENST00000432057 SPG7Q9UQ90 795 aa24.53■■□□□ 1.52
VRK2-205ENST00000432057 CEP85Q6P2H3 762 aa24.53■■□□□ 1.52
VRK2-205ENST00000432057 PLEKHG2Q9H7P9 1386 aa24.52■■□□□ 1.52
VRK2-205ENST00000432057 PHKG2P15735 406 aa24.52■■□□□ 1.52
VRK2-205ENST00000432057 PHAXQ9H814 394 aaKnown RBP24.52■■□□□ 1.52
VRK2-205ENST00000432057 ZBTB47Q9UFB7 747 aaPredicted RBP24.52■■□□□ 1.52
VRK2-205ENST00000432057 COL5A2P05997 1499 aaPredicted RBP24.52■■□□□ 1.52
VRK2-205ENST00000432057 CHPF2Q9P2E5 772 aa24.51■■□□□ 1.51
VRK2-205ENST00000432057 ANP32EQ9BTT0 268 aa24.51■■□□□ 1.51
VRK2-205ENST00000432057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.51■■□□□ 1.512e-6■■■■□ 23.5
VRK2-205ENST00000432057 LTBP4Q8N2S1 1624 aa24.51■■□□□ 1.51
VRK2-205ENST00000432057 RPAP2Q8IXW5 612 aaPredicted RBP24.5■■□□□ 1.51
VRK2-205ENST00000432057 MRC1P22897 1456 aa24.5■■□□□ 1.51
VRK2-205ENST00000432057 HEG1Q9ULI3 1381 aa24.5■■□□□ 1.51
VRK2-205ENST00000432057 ROBO1Q9Y6N7 1651 aa24.49■■□□□ 1.51
VRK2-205ENST00000432057 SHANK3Q9BYB0 1731 aa24.49■■□□□ 1.51
VRK2-205ENST00000432057 WDR17Q8IZU2 1322 aa24.49■■□□□ 1.51
VRK2-205ENST00000432057 IFNL2Q8IZJ0 200 aa24.48■■□□□ 1.51
VRK2-205ENST00000432057 DCTPP1Q9H773 170 aa24.48■■□□□ 1.51
VRK2-205ENST00000432057 DDRGK1Q96HY6 314 aa24.47■■□□□ 1.51
VRK2-205ENST00000432057 CYP27B1O15528 508 aa24.46■■□□□ 1.51
VRK2-205ENST00000432057 GIGYF1O75420 1035 aaPredicted RBP24.46■■□□□ 1.51
VRK2-205ENST00000432057 ANXA1P04083 346 aa24.46■■□□□ 1.51
VRK2-205ENST00000432057 CHMP4AQ9BY43 222 aa24.46■■□□□ 1.51
VRK2-205ENST00000432057 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
VRK2-205ENST00000432057 PRAMEF22A3QJZ6 481 aa24.45■■□□□ 1.5
VRK2-205ENST00000432057 TOM1L2Q6ZVM7 507 aa24.44■■□□□ 1.5
VRK2-205ENST00000432057 GNAI2P04899 355 aa24.43■■□□□ 1.5
VRK2-205ENST00000432057 GNAI3P08754 354 aa24.43■■□□□ 1.5
VRK2-205ENST00000432057 SLC39A6Q13433 755 aa24.43■■□□□ 1.5
VRK2-205ENST00000432057 NFATC2IPQ8NCF5 419 aa24.42■■□□□ 1.5
VRK2-205ENST00000432057 LAMB4A4D0S4 1761 aa24.42■■□□□ 1.5
VRK2-205ENST00000432057 ZNF790Q6PG37 636 aa24.41■■□□□ 1.5
VRK2-205ENST00000432057 DCAF5Q96JK2 942 aa24.41■■□□□ 1.5
VRK2-205ENST00000432057 DBF4Q9UBU7 674 aaPredicted RBP24.41■■□□□ 1.5
VRK2-205ENST00000432057 ADCY9O60503 1353 aa24.41■■□□□ 1.5
VRK2-205ENST00000432057 GLI3P10071 1580 aa24.4■■□□□ 1.5
VRK2-205ENST00000432057 HMMRO75330 724 aa24.4■■□□□ 1.5
VRK2-205ENST00000432057 PROSER3Q2NL68 480 aa24.4■■□□□ 1.5
VRK2-205ENST00000432057 AHDC1Q5TGY3 1603 aaPredicted RBP24.39■■□□□ 1.5
VRK2-205ENST00000432057 PI4KAP2A4QPH2 592 aa24.38■■□□□ 1.49
VRK2-205ENST00000432057 PI4KAP1Q8N8J0 262 aa24.38■■□□□ 1.49
VRK2-205ENST00000432057 DNAAF4Q8WXU2 420 aa24.38■■□□□ 1.49
VRK2-205ENST00000432057 SRCIN1Q9C0H9 1055 aa24.38■■□□□ 1.49
VRK2-205ENST00000432057 HSP90AB1P08238 724 aaKnown RBP24.38■■□□□ 1.49
VRK2-205ENST00000432057 BMP2KLQ5H9B9 411 aa24.38■■□□□ 1.49
VRK2-205ENST00000432057 USP44Q9H0E7 712 aa24.38■■□□□ 1.49
VRK2-205ENST00000432057 STRN4Q9NRL3 753 aa24.38■■□□□ 1.49
VRK2-205ENST00000432057 COL22A1Q8NFW1 1626 aaPredicted RBP24.38■■□□□ 1.49
VRK2-205ENST00000432057 COL14A1Q05707 1796 aaKnown RBP24.37■■□□□ 1.49
VRK2-205ENST00000432057 UBR2Q8IWV8 1755 aa24.37■■□□□ 1.49
VRK2-205ENST00000432057 UPF2Q9HAU5 1272 aaKnown RBP24.37■■□□□ 1.49
VRK2-205ENST00000432057 LRRFIP2Q9Y608 721 aaKnown RBP24.37■■□□□ 1.49
VRK2-205ENST00000432057 APBB1O00213 710 aa24.36■■□□□ 1.49
VRK2-205ENST00000432057 BCL11AQ9H165 835 aa24.36■■□□□ 1.49
VRK2-205ENST00000432057 PAPPAQ13219 1627 aa24.36■■□□□ 1.49
VRK2-205ENST00000432057 PCDH11XQ9BZA7 1347 aa24.36■■□□□ 1.49
VRK2-205ENST00000432057 PCDH11YQ9BZA8 1340 aa24.36■■□□□ 1.49
VRK2-205ENST00000432057 SMARCA5O60264 1052 aaPredicted RBP24.36■■□□□ 1.49
VRK2-205ENST00000432057 LARP1Q6PKG0 1096 aaKnown RBP24.36■■□□□ 1.49
VRK2-205ENST00000432057 CARD10Q9BWT7 1032 aa24.36■■□□□ 1.49
VRK2-205ENST00000432057 COL16A1Q07092 1604 aaPredicted RBP24.36■■□□□ 1.49
VRK2-205ENST00000432057 TOGARAM1Q9Y4F4 1720 aa24.35■■□□□ 1.49
VRK2-205ENST00000432057 UBTFL1P0CB47 393 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms