RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.71
SMARCE1-205ENST00000431889 SLC4A9Q96Q91 983 aa19.52■□□□□ 0.71
SMARCE1-205ENST00000431889 FLAD1Q8NFF5 587 aa19.51■□□□□ 0.71
SMARCE1-205ENST00000431889 SULT6B1Q6IMI4 303 aa19.5■□□□□ 0.71
SMARCE1-205ENST00000431889 KNSTRNQ9Y448 316 aa19.5■□□□□ 0.71
SMARCE1-205ENST00000431889 KDM6AO15550 1401 aaPredicted RBP19.5■□□□□ 0.71
SMARCE1-205ENST00000431889 PLEKHO1Q53GL0 409 aaPredicted RBP19.49■□□□□ 0.71
SMARCE1-205ENST00000431889 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
SMARCE1-205ENST00000431889 KIF7Q2M1P5 1343 aa19.48■□□□□ 0.71
SMARCE1-205ENST00000431889 PTCD1O75127 700 aaKnown RBP19.47■□□□□ 0.71
SMARCE1-205ENST00000431889 CABP4P57796 275 aa19.47■□□□□ 0.71
SMARCE1-205ENST00000431889 SSFA2P28290 1259 aa19.46■□□□□ 0.71
SMARCE1-205ENST00000431889 MTHFSP49914 203 aa19.46■□□□□ 0.71
SMARCE1-205ENST00000431889 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
SMARCE1-205ENST00000431889 HMOX1P09601 288 aa19.45■□□□□ 0.7
SMARCE1-205ENST00000431889 DCAF5Q96JK2 942 aa19.45■□□□□ 0.7
SMARCE1-205ENST00000431889 CD2APQ9Y5K6 639 aa19.45■□□□□ 0.7
SMARCE1-205ENST00000431889 KDRP35968 1356 aa19.45■□□□□ 0.7
SMARCE1-205ENST00000431889 IL13P35225 146 aa19.44■□□□□ 0.7
SMARCE1-205ENST00000431889 AMER1Q5JTC6 1135 aaPredicted RBP19.44■□□□□ 0.7
SMARCE1-205ENST00000431889 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
SMARCE1-205ENST00000431889 NFATC2IPQ8NCF5 419 aa19.44■□□□□ 0.7
SMARCE1-205ENST00000431889 ERVV-2B6SEH9 535 aa19.44■□□□□ 0.7
SMARCE1-205ENST00000431889 MMP10P09238 476 aa19.44■□□□□ 0.7
SMARCE1-205ENST00000431889 ZNF526Q8TF50 670 aaPredicted RBP19.44■□□□□ 0.7
SMARCE1-205ENST00000431889 COL5A3P25940 1745 aaPredicted RBP19.43■□□□□ 0.7
SMARCE1-205ENST00000431889 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
SMARCE1-205ENST00000431889 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
SMARCE1-205ENST00000431889 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
SMARCE1-205ENST00000431889 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
SMARCE1-205ENST00000431889 GRIN3BO60391 1043 aa19.42■□□□□ 0.7
SMARCE1-205ENST00000431889 HSP90AB1P08238 724 aaKnown RBP19.42■□□□□ 0.7
SMARCE1-205ENST00000431889 C1QTNF8P60827 252 aa19.42■□□□□ 0.7
SMARCE1-205ENST00000431889 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
SMARCE1-205ENST00000431889 ARHGEF1Q92888 912 aaKnown RBP19.42■□□□□ 0.7
SMARCE1-205ENST00000431889 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
SMARCE1-205ENST00000431889 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
SMARCE1-205ENST00000431889 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
SMARCE1-205ENST00000431889 GIGYF1O75420 1035 aaPredicted RBP19.4■□□□□ 0.7
SMARCE1-205ENST00000431889 VIRMAQ69YN4 1812 aaKnown RBP19.39■□□□□ 0.7
SMARCE1-205ENST00000431889 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.7
SMARCE1-205ENST00000431889 C4AP0C0L4 1744 aa19.39■□□□□ 0.69
SMARCE1-205ENST00000431889 HMGB2P26583 209 aaKnown RBP19.38■□□□□ 0.69
SMARCE1-205ENST00000431889 SRP68Q9UHB9 627 aaKnown RBP19.38■□□□□ 0.69
SMARCE1-205ENST00000431889 TJP1Q07157 1748 aa19.37■□□□□ 0.69
SMARCE1-205ENST00000431889 A0A0G2JLW4 131 aa19.37■□□□□ 0.69
SMARCE1-205ENST00000431889 RFC4P35249 363 aa19.37■□□□□ 0.69
SMARCE1-205ENST00000431889 SLC39A6Q13433 755 aa19.37■□□□□ 0.69
SMARCE1-205ENST00000431889 ATP10DQ9P241 1426 aa19.37■□□□□ 0.69
SMARCE1-205ENST00000431889 GYS1P13807 737 aa19.36■□□□□ 0.69
SMARCE1-205ENST00000431889 CRKLP46109 303 aaKnown RBP19.36■□□□□ 0.69
SMARCE1-205ENST00000431889 PER1O15534 1290 aaPredicted RBP19.36■□□□□ 0.69
SMARCE1-205ENST00000431889 RPS6KA4O75676 772 aa19.36■□□□□ 0.69
SMARCE1-205ENST00000431889 KIAA1551Q9HCM1 1747 aa19.35■□□□□ 0.69
SMARCE1-205ENST00000431889 CNTNAP4Q9C0A0 1308 aa19.35■□□□□ 0.69
SMARCE1-205ENST00000431889 ZNF831Q5JPB2 1677 aa19.35■□□□□ 0.69
SMARCE1-205ENST00000431889 CEP350Q5VT06 3117 aa19.34■□□□□ 0.69
SMARCE1-205ENST00000431889 PXDNLA1KZ92 1463 aa19.33■□□□□ 0.69
SMARCE1-205ENST00000431889 MTHFSDQ2M296 383 aaKnown RBP19.33■□□□□ 0.69
SMARCE1-205ENST00000431889 AKAP4Q5JQC9 854 aa19.33■□□□□ 0.69
SMARCE1-205ENST00000431889 RC3H1Q5TC82 1133 aaKnown RBP19.33■□□□□ 0.69
SMARCE1-205ENST00000431889 DNAJC10Q8IXB1 793 aa19.33■□□□□ 0.69
SMARCE1-205ENST00000431889 BCS1LQ9Y276 419 aa19.33■□□□□ 0.69
SMARCE1-205ENST00000431889 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 PLEKHG2Q9H7P9 1386 aa19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 KIF13BQ9NQT8 1826 aa19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 U2SURPO15042 1029 aaKnown RBP19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 RNMTO43148 476 aaKnown RBP19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 FKBP8Q14318 412 aa19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 NLGN1Q8N2Q7 840 aa19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 SLC52A2Q9HAB3 445 aa19.32■□□□□ 0.68
SMARCE1-205ENST00000431889 DPEP1P16444 411 aa19.31■□□□□ 0.68
SMARCE1-205ENST00000431889 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
SMARCE1-205ENST00000431889 PARP3Q9Y6F1 533 aa19.31■□□□□ 0.68
SMARCE1-205ENST00000431889 GPBP1L1Q9HC44 474 aaPredicted RBP19.3■□□□□ 0.68
SMARCE1-205ENST00000431889 ADRA2BP18089 450 aa19.28■□□□□ 0.68
SMARCE1-205ENST00000431889 DDR1Q08345 913 aa19.28■□□□□ 0.68
SMARCE1-205ENST00000431889 CCDC87Q9NVE4 849 aa19.28■□□□□ 0.68
SMARCE1-205ENST00000431889 C10orf71Q711Q0 1435 aa19.28■□□□□ 0.68
SMARCE1-205ENST00000431889 ADCY9O60503 1353 aa19.27■□□□□ 0.68
SMARCE1-205ENST00000431889 USPL1Q5W0Q7 1092 aa19.27■□□□□ 0.67
SMARCE1-205ENST00000431889 ARHGAP27Q6ZUM4 889 aa19.27■□□□□ 0.67
SMARCE1-205ENST00000431889 USP42Q9H9J4 1324 aaKnown RBP19.26■□□□□ 0.67
SMARCE1-205ENST00000431889 ADAMTS7Q9UKP4 1686 aa19.26■□□□□ 0.67
SMARCE1-205ENST00000431889 KCPQ6ZWJ8 1503 aa19.26■□□□□ 0.67
SMARCE1-205ENST00000431889 FCHSD2O94868 740 aa19.26■□□□□ 0.67
SMARCE1-205ENST00000431889 COL3A1P02461 1466 aaPredicted RBP19.26■□□□□ 0.67
SMARCE1-205ENST00000431889 CHRNA5P30532 468 aa19.25■□□□□ 0.67
SMARCE1-205ENST00000431889 ZBTB1Q9Y2K1 713 aa19.25■□□□□ 0.67
SMARCE1-205ENST00000431889 BRCA1P38398 1863 aaKnown RBP19.24■□□□□ 0.67
SMARCE1-205ENST00000431889 CYP19A1P11511 503 aaPredicted RBP19.24■□□□□ 0.67
SMARCE1-205ENST00000431889 KCNA3P22001 575 aa19.24■□□□□ 0.67
SMARCE1-205ENST00000431889 TGFB2P61812 414 aa19.24■□□□□ 0.67
SMARCE1-205ENST00000431889 MRC1P22897 1456 aa19.24■□□□□ 0.67
SMARCE1-205ENST00000431889 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
SMARCE1-205ENST00000431889 ZPR1O75312 459 aa19.22■□□□□ 0.67
SMARCE1-205ENST00000431889 SOS1Q07889 1333 aaPredicted RBP19.22■□□□□ 0.67
SMARCE1-205ENST00000431889 POLRMTO00411 1230 aaKnown RBP19.21■□□□□ 0.67
SMARCE1-205ENST00000431889 IL17REQ8NFR9 667 aa19.21■□□□□ 0.67
SMARCE1-205ENST00000431889 AFDNP55196 1824 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms