RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
CSTF3-202ENST00000431742 PIGBQ92521 554 aa19.02■□□□□ 0.64
CSTF3-202ENST00000431742 TMOD3Q9NYL9 352 aa19.02■□□□□ 0.64
CSTF3-202ENST00000431742 PLSCR1O15162 318 aa19.01■□□□□ 0.63
CSTF3-202ENST00000431742 BAG6P46379 1132 aa19.01■□□□□ 0.63
CSTF3-202ENST00000431742 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
CSTF3-202ENST00000431742 SLC52A2Q9HAB3 445 aa19.01■□□□□ 0.63
CSTF3-202ENST00000431742 C5P01031 1676 aa19.01■□□□□ 0.63
CSTF3-202ENST00000431742 CABP4P57796 275 aa18.99■□□□□ 0.63
CSTF3-202ENST00000431742 FAM9BQ8IZU0 186 aa18.99■□□□□ 0.63
CSTF3-202ENST00000431742 CAMKK2Q96RR4 588 aa18.99■□□□□ 0.63
CSTF3-202ENST00000431742 COL5A3P25940 1745 aaPredicted RBP18.99■□□□□ 0.63
CSTF3-202ENST00000431742 TJP1Q07157 1748 aa18.98■□□□□ 0.63
CSTF3-202ENST00000431742 RIPK4P57078 832 aa18.98■□□□□ 0.63
CSTF3-202ENST00000431742 EN1Q05925 392 aaPredicted RBP18.98■□□□□ 0.63
CSTF3-202ENST00000431742 MCM10Q7L590 875 aa18.98■□□□□ 0.63
CSTF3-202ENST00000431742 NFATC2IPQ8NCF5 419 aa18.98■□□□□ 0.63
CSTF3-202ENST00000431742 RTF1Q92541 710 aaKnown RBP18.98■□□□□ 0.63
CSTF3-202ENST00000431742 RRP7AQ9Y3A4 280 aaKnown RBP18.98■□□□□ 0.63
CSTF3-202ENST00000431742 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
CSTF3-202ENST00000431742 PALLDQ8WX93 1383 aa18.97■□□□□ 0.63
CSTF3-202ENST00000431742 APAF1O14727 1248 aa18.97■□□□□ 0.63
CSTF3-202ENST00000431742 DCTN1Q14203 1278 aa18.97■□□□□ 0.63
CSTF3-202ENST00000431742 TRIM35Q9UPQ4 493 aa18.96■□□□□ 0.63
CSTF3-202ENST00000431742 LMOD3Q0VAK6 560 aa18.95■□□□□ 0.62
CSTF3-202ENST00000431742 TEFQ10587 303 aa18.95■□□□□ 0.62
CSTF3-202ENST00000431742 EZH2Q15910 746 aaKnown RBP18.95■□□□□ 0.62
CSTF3-202ENST00000431742 PROM2Q8N271 834 aa18.95■□□□□ 0.62
CSTF3-202ENST00000431742 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
CSTF3-202ENST00000431742 ASAP1Q9ULH1 1129 aa18.95■□□□□ 0.62
CSTF3-202ENST00000431742 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
CSTF3-202ENST00000431742 SMARCC1Q92922 1105 aaPredicted RBP18.94■□□□□ 0.62
CSTF3-202ENST00000431742 TUBGCP6Q96RT7 1819 aa18.94■□□□□ 0.62
CSTF3-202ENST00000431742 QSER1Q2KHR3 1735 aa18.94■□□□□ 0.62
CSTF3-202ENST00000431742 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
CSTF3-202ENST00000431742 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
CSTF3-202ENST00000431742 TXNRD1Q16881 649 aa18.92■□□□□ 0.62
CSTF3-202ENST00000431742 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
CSTF3-202ENST00000431742 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
CSTF3-202ENST00000431742 CCDC27Q2M243 656 aa18.91■□□□□ 0.62
CSTF3-202ENST00000431742 SLC27A3Q5K4L6 730 aa18.91■□□□□ 0.62
CSTF3-202ENST00000431742 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
CSTF3-202ENST00000431742 SLC39A6Q13433 755 aa18.89■□□□□ 0.61
CSTF3-202ENST00000431742 TAF7Q15545 349 aaPredicted RBP18.89■□□□□ 0.61
CSTF3-202ENST00000431742 LRRC4BQ9NT99 713 aa18.89■□□□□ 0.61
CSTF3-202ENST00000431742 MYH14Q7Z406 1995 aaKnown RBP18.88■□□□□ 0.61
CSTF3-202ENST00000431742 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
CSTF3-202ENST00000431742 SIK1P57059 783 aa18.88■□□□□ 0.61
CSTF3-202ENST00000431742 ZNF790Q6PG37 636 aa18.88■□□□□ 0.61
CSTF3-202ENST00000431742 SLC4A9Q96Q91 983 aa18.88■□□□□ 0.61
CSTF3-202ENST00000431742 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
CSTF3-202ENST00000431742 BTBD11A6QL63 1104 aa18.87■□□□□ 0.61
CSTF3-202ENST00000431742 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
CSTF3-202ENST00000431742 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
CSTF3-202ENST00000431742 KCNQ3O43525 872 aa18.85■□□□□ 0.61
CSTF3-202ENST00000431742 KCNQ4P56696 695 aa18.85■□□□□ 0.61
CSTF3-202ENST00000431742 WWC1Q8IX03 1113 aa18.85■□□□□ 0.61
CSTF3-202ENST00000431742 BABAM1Q9NWV8 329 aa18.85■□□□□ 0.61
CSTF3-202ENST00000431742 HEG1Q9ULI3 1381 aa18.84■□□□□ 0.61
CSTF3-202ENST00000431742 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
CSTF3-202ENST00000431742 PTCD1O75127 700 aaKnown RBP18.84■□□□□ 0.61
CSTF3-202ENST00000431742 ITPK1Q13572 414 aa18.84■□□□□ 0.61
CSTF3-202ENST00000431742 TTC5Q8N0Z6 440 aa18.84■□□□□ 0.61
CSTF3-202ENST00000431742 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
CSTF3-202ENST00000431742 VSIG10Q8N0Z9 540 aa18.83■□□□□ 0.6
CSTF3-202ENST00000431742 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
CSTF3-202ENST00000431742 ANO8Q9HCE9 1232 aaPredicted RBP18.83■□□□□ 0.6
CSTF3-202ENST00000431742 MIS18AQ9NYP9 233 aa18.83■□□□□ 0.6
CSTF3-202ENST00000431742 ZNF521Q96K83 1311 aa18.82■□□□□ 0.6
CSTF3-202ENST00000431742 CHL1O00533 1208 aa18.82■□□□□ 0.6
CSTF3-202ENST00000431742 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
CSTF3-202ENST00000431742 ATP6V1AP38606 617 aa18.82■□□□□ 0.6
CSTF3-202ENST00000431742 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
CSTF3-202ENST00000431742 IL16Q14005 1332 aa18.81■□□□□ 0.6
CSTF3-202ENST00000431742 C4AP0C0L4 1744 aa18.81■□□□□ 0.6
CSTF3-202ENST00000431742 LINC00116Q8NCU8 138 aa18.81■□□□□ 0.6
CSTF3-202ENST00000431742 CFAP44Q96MT7 982 aa18.81■□□□□ 0.6
CSTF3-202ENST00000431742 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
CSTF3-202ENST00000431742 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
CSTF3-202ENST00000431742 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
CSTF3-202ENST00000431742 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
CSTF3-202ENST00000431742 HMGB2P26583 209 aaKnown RBP18.79■□□□□ 0.6
CSTF3-202ENST00000431742 EIF4A1P60842 406 aaKnown RBP18.79■□□□□ 0.6
CSTF3-202ENST00000431742 ZNF827Q17R98 1081 aa18.79■□□□□ 0.6
CSTF3-202ENST00000431742 WDR63Q8IWG1 891 aa18.79■□□□□ 0.6
CSTF3-202ENST00000431742 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
CSTF3-202ENST00000431742 CNTNAP4Q9C0A0 1308 aa18.78■□□□□ 0.6
CSTF3-202ENST00000431742 GNAI1P63096 354 aa18.78■□□□□ 0.6
CSTF3-202ENST00000431742 DNAJC10Q8IXB1 793 aa18.78■□□□□ 0.6
CSTF3-202ENST00000431742 SLC15A2Q16348 729 aa18.77■□□□□ 0.6
CSTF3-202ENST00000431742 NBPF14Q5TI25 921 aa18.77■□□□□ 0.6
CSTF3-202ENST00000431742 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
CSTF3-202ENST00000431742 RC3H1Q5TC82 1133 aaKnown RBP18.76■□□□□ 0.59
CSTF3-202ENST00000431742 STK32BQ9NY57 414 aa18.76■□□□□ 0.59
CSTF3-202ENST00000431742 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
CSTF3-202ENST00000431742 COL24A1Q17RW2 1714 aa18.76■□□□□ 0.59
CSTF3-202ENST00000431742 SNRPA1P09661 255 aaKnown RBP18.75■□□□□ 0.59
CSTF3-202ENST00000431742 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
CSTF3-202ENST00000431742 TEX13AQ9BXU3 409 aaPredicted RBP18.75■□□□□ 0.59
CSTF3-202ENST00000431742 PRAMEF22A3QJZ6 481 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms