RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 DCTN1Q14203 1278 aa14.67□□□□□ -0.06
SPTLC3-202ENST00000431275 NBPF14Q5TI25 921 aa14.67□□□□□ -0.06
SPTLC3-202ENST00000431275 RGPD3A6NKT7 1758 aaPredicted RBP14.67□□□□□ -0.06
SPTLC3-202ENST00000431275 RGPD4Q7Z3J3 1758 aa14.67□□□□□ -0.06
SPTLC3-202ENST00000431275 SCN11AQ9UI33 1791 aa14.67□□□□□ -0.06
SPTLC3-202ENST00000431275 ADAMTS7Q9UKP4 1686 aa14.66□□□□□ -0.06
SPTLC3-202ENST00000431275 CEMIPQ8WUJ3 1361 aa14.66□□□□□ -0.06
SPTLC3-202ENST00000431275 RIPK4P57078 832 aa14.66□□□□□ -0.06
SPTLC3-202ENST00000431275 CCNL1Q9UK58 526 aaPredicted RBP14.66□□□□□ -0.06
SPTLC3-202ENST00000431275 RREB1Q92766 1687 aa14.65□□□□□ -0.06
SPTLC3-202ENST00000431275 LOC102724428A0A0B4J2F2 783 aa14.65□□□□□ -0.06
SPTLC3-202ENST00000431275 SIK1P57059 783 aa14.65□□□□□ -0.06
SPTLC3-202ENST00000431275 RRP7AQ9Y3A4 280 aaKnown RBP14.65□□□□□ -0.06
SPTLC3-202ENST00000431275 MRC1P22897 1456 aa14.64□□□□□ -0.07
SPTLC3-202ENST00000431275 SLC39A6Q13433 755 aa14.64□□□□□ -0.07
SPTLC3-202ENST00000431275 NEUROD2Q15784 382 aa14.64□□□□□ -0.07
SPTLC3-202ENST00000431275 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
SPTLC3-202ENST00000431275 CCER2I3L3R5 266 aa14.63□□□□□ -0.07
SPTLC3-202ENST00000431275 APAF1O14727 1248 aa14.63□□□□□ -0.07
SPTLC3-202ENST00000431275 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
SPTLC3-202ENST00000431275 ANO8Q9HCE9 1232 aaPredicted RBP14.63□□□□□ -0.07
SPTLC3-202ENST00000431275 LY75O60449 1722 aa14.63□□□□□ -0.07
SPTLC3-202ENST00000431275 NUP188Q5SRE5 1749 aa14.63□□□□□ -0.07
SPTLC3-202ENST00000431275 PSDA5PKW4 1024 aaPredicted RBP14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 PTCD1O75127 700 aaKnown RBP14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 ATP6V1AP38606 617 aa14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 R3HDM1Q15032 1099 aaKnown RBP14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 TAF7Q15545 349 aaPredicted RBP14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 MIER1Q8N108 512 aa14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 THUMPD2Q9BTF0 503 aaKnown RBP14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 STK32BQ9NY57 414 aa14.62□□□□□ -0.07
SPTLC3-202ENST00000431275 BTBD11A6QL63 1104 aa14.61□□□□□ -0.07
SPTLC3-202ENST00000431275 HMGB2P26583 209 aaKnown RBP14.61□□□□□ -0.07
SPTLC3-202ENST00000431275 LMOD3Q0VAK6 560 aa14.61□□□□□ -0.07
SPTLC3-202ENST00000431275 SLC15A2Q16348 729 aa14.61□□□□□ -0.07
SPTLC3-202ENST00000431275 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
SPTLC3-202ENST00000431275 VIRMAQ69YN4 1812 aaKnown RBP14.6□□□□□ -0.07
SPTLC3-202ENST00000431275 ITPK1Q13572 414 aa14.6□□□□□ -0.07
SPTLC3-202ENST00000431275 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
SPTLC3-202ENST00000431275 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
SPTLC3-202ENST00000431275 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
SPTLC3-202ENST00000431275 DLG5Q8TDM6 1919 aa14.6□□□□□ -0.07
SPTLC3-202ENST00000431275 KCNQ3O43525 872 aa14.59□□□□□ -0.07
SPTLC3-202ENST00000431275 ZNF827Q17R98 1081 aa14.59□□□□□ -0.07
SPTLC3-202ENST00000431275 LINC00116Q8NCU8 138 aa14.58□□□□□ -0.08
SPTLC3-202ENST00000431275 MIS18AQ9NYP9 233 aa14.58□□□□□ -0.08
SPTLC3-202ENST00000431275 PAPPAQ13219 1627 aa14.57□□□□□ -0.08
SPTLC3-202ENST00000431275 SENP3-EIF4A1A0A087X0R7 540 aa14.57□□□□□ -0.08
SPTLC3-202ENST00000431275 ZNF496Q96IT1 587 aaPredicted RBP14.57□□□□□ -0.08
SPTLC3-202ENST00000431275 TFCP2L1Q9NZI6 479 aa14.57□□□□□ -0.08
SPTLC3-202ENST00000431275 SIPA1L3O60292 1781 aaPredicted RBP14.57□□□□□ -0.08
SPTLC3-202ENST00000431275 DNAJC10Q8IXB1 793 aa14.56□□□□□ -0.08
SPTLC3-202ENST00000431275 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
SPTLC3-202ENST00000431275 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
SPTLC3-202ENST00000431275 KCPQ6ZWJ8 1503 aa14.56□□□□□ -0.08
SPTLC3-202ENST00000431275 AK7Q96M32 723 aa14.55□□□□□ -0.08
SPTLC3-202ENST00000431275 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
SPTLC3-202ENST00000431275 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
SPTLC3-202ENST00000431275 PDGFDQ9GZP0 370 aaPredicted RBP14.54□□□□□ -0.08
SPTLC3-202ENST00000431275 BABAM1Q9NWV8 329 aa14.54□□□□□ -0.08
SPTLC3-202ENST00000431275 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
SPTLC3-202ENST00000431275 C5P01031 1676 aa14.54□□□□□ -0.08
SPTLC3-202ENST00000431275 ZNF831Q5JPB2 1677 aa14.54□□□□□ -0.08
SPTLC3-202ENST00000431275 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
SPTLC3-202ENST00000431275 TEX13AQ9BXU3 409 aaPredicted RBP14.53□□□□□ -0.08
SPTLC3-202ENST00000431275 TSPYL4Q9UJ04 414 aa14.53□□□□□ -0.08
SPTLC3-202ENST00000431275 LAS1LQ9Y4W2 734 aaKnown RBP14.53□□□□□ -0.08
SPTLC3-202ENST00000431275 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.08
SPTLC3-202ENST00000431275 C4BP0C0L5 1744 aa14.52□□□□□ -0.08
SPTLC3-202ENST00000431275 PNPLA7Q6ZV29 1317 aa14.52□□□□□ -0.08
SPTLC3-202ENST00000431275 CNTNAP4Q9C0A0 1308 aa14.52□□□□□ -0.08
SPTLC3-202ENST00000431275 CHL1O00533 1208 aa14.52□□□□□ -0.09
SPTLC3-202ENST00000431275 GNPATO15228 680 aa14.52□□□□□ -0.09
SPTLC3-202ENST00000431275 CYP19A1P11511 503 aaPredicted RBP14.52□□□□□ -0.09
SPTLC3-202ENST00000431275 CRKLP46109 303 aaKnown RBP14.52□□□□□ -0.09
SPTLC3-202ENST00000431275 EIF4A1P60842 406 aaKnown RBP14.52□□□□□ -0.09
SPTLC3-202ENST00000431275 SALL2Q9Y467 1007 aaPredicted RBP14.52□□□□□ -0.09
SPTLC3-202ENST00000431275 UBR2Q8IWV8 1755 aa14.52□□□□□ -0.09
SPTLC3-202ENST00000431275 STARD3NLO95772 234 aa14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 SNRPA1P09661 255 aaKnown RBP14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 CALD1Q05682 793 aaKnown RBP14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 INTS5Q6P9B9 1019 aaKnown RBP14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 SMIM5Q71RC9 77 aa14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 AMIGO3Q86WK7 504 aa14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 COL23A1Q86Y22 540 aaPredicted RBP14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 WWC1Q8IX03 1113 aa14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 FLAD1Q8NFF5 587 aa14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 CFAP44Q96MT7 982 aa14.51□□□□□ -0.09
SPTLC3-202ENST00000431275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.5□□□□□ -0.09
SPTLC3-202ENST00000431275 PRAMEF22A3QJZ6 481 aa14.5□□□□□ -0.09
SPTLC3-202ENST00000431275 RPS6KA4O75676 772 aa14.5□□□□□ -0.09
SPTLC3-202ENST00000431275 CCDC87Q9NVE4 849 aa14.5□□□□□ -0.09
SPTLC3-202ENST00000431275 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
SPTLC3-202ENST00000431275 USP16Q9Y5T5 823 aa14.5□□□□□ -0.09
SPTLC3-202ENST00000431275 TJP1Q07157 1748 aa14.49□□□□□ -0.09
SPTLC3-202ENST00000431275 MSH5O43196 834 aa14.49□□□□□ -0.09
SPTLC3-202ENST00000431275 PHF14O94880 888 aa14.49□□□□□ -0.09
SPTLC3-202ENST00000431275 ZNF853P0CG23 659 aa14.49□□□□□ -0.09
SPTLC3-202ENST00000431275 SSFA2P28290 1259 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms