RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 ATG3Q9NT62 314 aa30.72■■■□□ 2.51
PTPRA-207ENST00000431048 PPM1GO15355 546 aaPredicted RBP30.71■■■□□ 2.51
PTPRA-207ENST00000431048 PLEKHG2Q9H7P9 1386 aa30.69■■■□□ 2.5
PTPRA-207ENST00000431048 NLGN1Q8N2Q7 840 aa30.69■■■□□ 2.5
PTPRA-207ENST00000431048 PXDNLA1KZ92 1463 aa30.68■■■□□ 2.5
PTPRA-207ENST00000431048 ANKRD26Q9UPS8 1709 aa30.67■■■□□ 2.5
PTPRA-207ENST00000431048 TRAPPC3LQ5T215 181 aa30.67■■■□□ 2.5
PTPRA-207ENST00000431048 APLP1P51693 650 aa30.66■■■□□ 2.5
PTPRA-207ENST00000431048 RC3H1Q5TC82 1133 aaKnown RBP30.66■■■□□ 2.5
PTPRA-207ENST00000431048 RTCBQ9Y3I0 505 aaKnown RBP30.66■■■□□ 2.5
PTPRA-207ENST00000431048 POLKQ9UBT6 870 aa30.65■■■□□ 2.5
PTPRA-207ENST00000431048 KIF13BQ9NQT8 1826 aa30.65■■■□□ 2.5
PTPRA-207ENST00000431048 TOMM70O94826 608 aa30.64■■■□□ 2.5
PTPRA-207ENST00000431048 ADRA2BP18089 450 aa30.64■■■□□ 2.5
PTPRA-207ENST00000431048 KDRP35968 1356 aa30.64■■■□□ 2.5
PTPRA-207ENST00000431048 ERVV-2B6SEH9 535 aa30.63■■■□□ 2.49
PTPRA-207ENST00000431048 BCS1LQ9Y276 419 aa30.62■■■□□ 2.49
PTPRA-207ENST00000431048 A0A0G2JLW4 131 aa30.61■■■□□ 2.49
PTPRA-207ENST00000431048 SLC4A9Q96Q91 983 aa30.61■■■□□ 2.49
PTPRA-207ENST00000431048 C10orf71Q711Q0 1435 aa30.61■■■□□ 2.49
PTPRA-207ENST00000431048 KIAA1551Q9HCM1 1747 aa30.61■■■□□ 2.49
PTPRA-207ENST00000431048 DNAJC5GQ8N7S2 189 aa30.6■■■□□ 2.49
PTPRA-207ENST00000431048 ARHGEF1Q92888 912 aaKnown RBP30.6■■■□□ 2.49
PTPRA-207ENST00000431048 CCDC87Q9NVE4 849 aa30.6■■■□□ 2.49
PTPRA-207ENST00000431048 ZNF831Q5JPB2 1677 aa30.59■■■□□ 2.49
PTPRA-207ENST00000431048 CNTNAP4Q9C0A0 1308 aa30.58■■■□□ 2.49
PTPRA-207ENST00000431048 RPS6KA4O75676 772 aa30.58■■■□□ 2.49
PTPRA-207ENST00000431048 HSP90AB1P08238 724 aaKnown RBP30.58■■■□□ 2.49
PTPRA-207ENST00000431048 EIF4A2Q14240 407 aaKnown RBP30.58■■■□□ 2.49
PTPRA-207ENST00000431048 ARHGAP27Q6ZUM4 889 aa30.58■■■□□ 2.49
PTPRA-207ENST00000431048 GYS1P13807 737 aa30.57■■■□□ 2.48
PTPRA-207ENST00000431048 DPEP1P16444 411 aa30.56■■■□□ 2.48
PTPRA-207ENST00000431048 DCAF5Q96JK2 942 aa30.56■■■□□ 2.48
PTPRA-207ENST00000431048 RFC4P35249 363 aa30.55■■■□□ 2.48
PTPRA-207ENST00000431048 RBM42Q9BTD8 480 aaKnown RBP30.55■■■□□ 2.48
PTPRA-207ENST00000431048 N4BP2Q86UW6 1770 aaPredicted RBP30.54■■■□□ 2.48
PTPRA-207ENST00000431048 FCHSD2O94868 740 aa30.54■■■□□ 2.48
PTPRA-207ENST00000431048 PARP3Q9Y6F1 533 aa30.54■■■□□ 2.48
PTPRA-207ENST00000431048 KCNA3P22001 575 aa30.52■■■□□ 2.48
PTPRA-207ENST00000431048 C4AP0C0L4 1744 aa30.51■■■□□ 2.47
PTPRA-207ENST00000431048 PLEKHO1Q53GL0 409 aaPredicted RBP30.51■■■□□ 2.47
PTPRA-207ENST00000431048 NMRK2Q9NPI5 230 aa30.51■■■□□ 2.47
PTPRA-207ENST00000431048 RBM46Q8TBY0 533 aaKnown RBP30.5■■■□□ 2.47
PTPRA-207ENST00000431048 AMOTQ4VCS5 1084 aa30.48■■■□□ 2.47
PTPRA-207ENST00000431048 COL5A3P25940 1745 aaPredicted RBP30.47■■■□□ 2.47
PTPRA-207ENST00000431048 CABP4P57796 275 aa30.47■■■□□ 2.47
PTPRA-207ENST00000431048 C9orf131Q5VYM1 1079 aa30.47■■■□□ 2.47
PTPRA-207ENST00000431048 PIM2Q9P1W9 311 aa30.47■■■□□ 2.47
PTPRA-207ENST00000431048 BRCA1P38398 1863 aaKnown RBP30.46■■■□□ 2.47
PTPRA-207ENST00000431048 ZNF530Q6P9A1 599 aaPredicted RBP30.44■■■□□ 2.46
PTPRA-207ENST00000431048 KDM6AO15550 1401 aaPredicted RBP30.44■■■□□ 2.46
PTPRA-207ENST00000431048 TNNT2P45379 298 aaPredicted RBP30.43■■■□□ 2.46
PTPRA-207ENST00000431048 FSTL1Q12841 308 aa30.43■■■□□ 2.46
PTPRA-207ENST00000431048 MYH14Q7Z406 1995 aaKnown RBP30.43■■■□□ 2.46
PTPRA-207ENST00000431048 DALRD3Q5D0E6 543 aaKnown RBP30.42■■■□□ 2.46
PTPRA-207ENST00000431048 TIMELESSQ9UNS1 1208 aa30.42■■■□□ 2.46
PTPRA-207ENST00000431048 ARFGEF1Q9Y6D6 1849 aa30.41■■■□□ 2.46
PTPRA-207ENST00000431048 CRKLP46109 303 aaKnown RBP30.41■■■□□ 2.46
PTPRA-207ENST00000431048 MTHFSP49914 203 aa30.41■■■□□ 2.46
PTPRA-207ENST00000431048 C16orf71Q8IYS4 520 aaPredicted RBP30.41■■■□□ 2.46
PTPRA-207ENST00000431048 USP42Q9H9J4 1324 aaKnown RBP30.4■■■□□ 2.46
PTPRA-207ENST00000431048 PTCD1O75127 700 aaKnown RBP30.39■■■□□ 2.46
PTPRA-207ENST00000431048 FKBP8Q14318 412 aa30.39■■■□□ 2.46
PTPRA-207ENST00000431048 KDM2BQ8NHM5 1336 aa30.39■■■□□ 2.46
PTPRA-207ENST00000431048 DDR1Q08345 913 aa30.38■■■□□ 2.45
PTPRA-207ENST00000431048 SRP68Q9UHB9 627 aaKnown RBP30.38■■■□□ 2.45
PTPRA-207ENST00000431048 JMYQ8N9B5 988 aa30.37■■■□□ 2.45
PTPRA-207ENST00000431048 NFATC2IPQ8NCF5 419 aa30.37■■■□□ 2.45
PTPRA-207ENST00000431048 KLRG1Q96E93 195 aa30.37■■■□□ 2.45
PTPRA-207ENST00000431048 TM4SF1P30408 202 aa30.36■■■□□ 2.45
PTPRA-207ENST00000431048 C1orf141Q5JVX7 400 aa30.36■■■□□ 2.45
PTPRA-207ENST00000431048 WDR90Q96KV7 1748 aa30.35■■■□□ 2.45
PTPRA-207ENST00000431048 RNF181Q9P0P0 153 aa30.34■■■□□ 2.45
PTPRA-207ENST00000431048 INTS5Q6P9B9 1019 aaKnown RBP30.33■■■□□ 2.45
PTPRA-207ENST00000431048 POLRMTO00411 1230 aaKnown RBP30.32■■■□□ 2.44
PTPRA-207ENST00000431048 KCPQ6ZWJ8 1503 aa30.32■■■□□ 2.44
PTPRA-207ENST00000431048 CHRNA5P30532 468 aa30.31■■■□□ 2.44
PTPRA-207ENST00000431048 AEBP1Q8IUX7 1158 aa30.31■■■□□ 2.44
PTPRA-207ENST00000431048 RRAGCQ9HB90 399 aa30.31■■■□□ 2.44
PTPRA-207ENST00000431048 POLR3GLQ9BT43 218 aa30.3■■■□□ 2.44
PTPRA-207ENST00000431048 ZC3H4Q9UPT8 1303 aaKnown RBP30.29■■■□□ 2.44
PTPRA-207ENST00000431048 PANK3Q9H999 370 aa30.29■■■□□ 2.44
PTPRA-207ENST00000431048 HTRA3P83110 453 aa30.28■■■□□ 2.44
PTPRA-207ENST00000431048 ZPR1O75312 459 aa30.27■■■□□ 2.44
PTPRA-207ENST00000431048 TJP1Q07157 1748 aa30.26■■■□□ 2.43
PTPRA-207ENST00000431048 SULT6B1Q6IMI4 303 aa30.26■■■□□ 2.43
PTPRA-207ENST00000431048 SMC1BQ8NDV3 1235 aa30.25■■■□□ 2.43
PTPRA-207ENST00000431048 ADAMTS7Q9UKP4 1686 aa30.25■■■□□ 2.43
PTPRA-207ENST00000431048 SOS1Q07889 1333 aaPredicted RBP30.24■■■□□ 2.43
PTPRA-207ENST00000431048 USPL1Q5W0Q7 1092 aa30.24■■■□□ 2.43
PTPRA-207ENST00000431048 MORC1Q86VD1 984 aa30.24■■■□□ 2.43
PTPRA-207ENST00000431048 DNAJC10Q8IXB1 793 aa30.24■■■□□ 2.43
PTPRA-207ENST00000431048 SBF1O95248 1867 aa30.24■■■□□ 2.43
PTPRA-207ENST00000431048 AKAP4Q5JQC9 854 aa30.23■■■□□ 2.43
PTPRA-207ENST00000431048 COL13A1Q5TAT6 717 aaPredicted RBP30.23■■■□□ 2.43
PTPRA-207ENST00000431048 IL13P35225 146 aa30.22■■■□□ 2.43
PTPRA-207ENST00000431048 SLC52A2Q9HAB3 445 aa30.22■■■□□ 2.43
PTPRA-207ENST00000431048 NARFQ9UHQ1 456 aa30.22■■■□□ 2.43
PTPRA-207ENST00000431048 TNRC6CQ9HCJ0 1690 aaKnown RBP30.22■■■□□ 2.43
PTPRA-207ENST00000431048 CYP19A1P11511 503 aaPredicted RBP30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms