RNA–Protein interactions for RNA: ENST00000431037.2

PMS2P1-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 1, humanhuman

BASIC

Gene PMS2P1, Length 1,228 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P1-201ENST00000431037 EYA1Q99502 592 aa23.79■■□□□ 1.4
PMS2P1-201ENST00000431037 KIF13BQ9NQT8 1826 aa23.79■■□□□ 1.4
PMS2P1-201ENST00000431037 PHKG2P15735 406 aa23.78■■□□□ 1.4
PMS2P1-201ENST00000431037 ATP6V1AP38606 617 aa23.78■■□□□ 1.4
PMS2P1-201ENST00000431037 HSPA6P17066 643 aa23.77■■□□□ 1.4
PMS2P1-201ENST00000431037 ITPK1Q13572 414 aa23.77■■□□□ 1.4
PMS2P1-201ENST00000431037 ASAP1Q9ULH1 1129 aa23.77■■□□□ 1.4
PMS2P1-201ENST00000431037 SMIM5Q71RC9 77 aa23.76■■□□□ 1.39
PMS2P1-201ENST00000431037 ZNF526Q8TF50 670 aaPredicted RBP23.76■■□□□ 1.39
PMS2P1-201ENST00000431037 KDRP35968 1356 aa23.76■■□□□ 1.39
PMS2P1-201ENST00000431037 POLKQ9UBT6 870 aa23.74■■□□□ 1.39
PMS2P1-201ENST00000431037 PXDNLA1KZ92 1463 aa23.74■■□□□ 1.39
PMS2P1-201ENST00000431037 KIAA1551Q9HCM1 1747 aa23.73■■□□□ 1.39
PMS2P1-201ENST00000431037 MMP10P09238 476 aa23.73■■□□□ 1.39
PMS2P1-201ENST00000431037 ATG3Q9NT62 314 aa23.73■■□□□ 1.39
PMS2P1-201ENST00000431037 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
PMS2P1-201ENST00000431037 WWC3Q9ULE0 1092 aa23.72■■□□□ 1.39
PMS2P1-201ENST00000431037 RTCBQ9Y3I0 505 aaKnown RBP23.72■■□□□ 1.39
PMS2P1-201ENST00000431037 C10orf71Q711Q0 1435 aa23.71■■□□□ 1.39
PMS2P1-201ENST00000431037 ERVV-2B6SEH9 535 aa23.71■■□□□ 1.39
PMS2P1-201ENST00000431037 ADRA2BP18089 450 aa23.71■■□□□ 1.39
PMS2P1-201ENST00000431037 NLGN1Q8N2Q7 840 aa23.71■■□□□ 1.39
PMS2P1-201ENST00000431037 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
PMS2P1-201ENST00000431037 TGFB2P61812 414 aa23.7■■□□□ 1.38
PMS2P1-201ENST00000431037 EIF4A2Q14240 407 aaKnown RBP23.7■■□□□ 1.38
PMS2P1-201ENST00000431037 TRAPPC3LQ5T215 181 aa23.69■■□□□ 1.38
PMS2P1-201ENST00000431037 DCAF5Q96JK2 942 aa23.69■■□□□ 1.38
PMS2P1-201ENST00000431037 C4AP0C0L4 1744 aa23.69■■□□□ 1.38
PMS2P1-201ENST00000431037 CNTNAP4Q9C0A0 1308 aa23.68■■□□□ 1.38
PMS2P1-201ENST00000431037 RC3H1Q5TC82 1133 aaKnown RBP23.68■■□□□ 1.38
PMS2P1-201ENST00000431037 N4BP2Q86UW6 1770 aaPredicted RBP23.68■■□□□ 1.38
PMS2P1-201ENST00000431037 KIF3CO14782 793 aa23.66■■□□□ 1.38
PMS2P1-201ENST00000431037 BRCA1P38398 1863 aaKnown RBP23.65■■□□□ 1.38
PMS2P1-201ENST00000431037 RBM42Q9BTD8 480 aaKnown RBP23.65■■□□□ 1.38
PMS2P1-201ENST00000431037 CCDC87Q9NVE4 849 aa23.65■■□□□ 1.38
PMS2P1-201ENST00000431037 BCS1LQ9Y276 419 aa23.64■■□□□ 1.37
PMS2P1-201ENST00000431037 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 KDM6AO15550 1401 aaPredicted RBP23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 RFC4P35249 363 aa23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 TNNT2P45379 298 aaPredicted RBP23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 AMOTQ4VCS5 1084 aa23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 PLEKHO1Q53GL0 409 aaPredicted RBP23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 ARHGEF1Q92888 912 aaKnown RBP23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 SLC4A9Q96Q91 983 aa23.63■■□□□ 1.37
PMS2P1-201ENST00000431037 RPS6KA4O75676 772 aa23.62■■□□□ 1.37
PMS2P1-201ENST00000431037 GYS1P13807 737 aa23.62■■□□□ 1.37
PMS2P1-201ENST00000431037 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
PMS2P1-201ENST00000431037 ARFGEF1Q9Y6D6 1849 aa23.61■■□□□ 1.37
PMS2P1-201ENST00000431037 A0A0G2JLW4 131 aa23.6■■□□□ 1.37
PMS2P1-201ENST00000431037 APLP1P51693 650 aa23.6■■□□□ 1.37
PMS2P1-201ENST00000431037 CABP4P57796 275 aa23.6■■□□□ 1.37
PMS2P1-201ENST00000431037 ZNF530Q6P9A1 599 aaPredicted RBP23.6■■□□□ 1.37
PMS2P1-201ENST00000431037 TOMM70O94826 608 aa23.59■■□□□ 1.37
PMS2P1-201ENST00000431037 MYH14Q7Z406 1995 aaKnown RBP23.59■■□□□ 1.37
PMS2P1-201ENST00000431037 POLR3GLQ9BT43 218 aa23.58■■□□□ 1.37
PMS2P1-201ENST00000431037 FCHSD2O94868 740 aa23.57■■□□□ 1.36
PMS2P1-201ENST00000431037 DPEP1P16444 411 aa23.57■■□□□ 1.36
PMS2P1-201ENST00000431037 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
PMS2P1-201ENST00000431037 ARHGAP27Q6ZUM4 889 aa23.57■■□□□ 1.36
PMS2P1-201ENST00000431037 MTHFSP49914 203 aa23.56■■□□□ 1.36
PMS2P1-201ENST00000431037 TJP1Q07157 1748 aa23.56■■□□□ 1.36
PMS2P1-201ENST00000431037 KIF7Q2M1P5 1343 aa23.55■■□□□ 1.36
PMS2P1-201ENST00000431037 CRKLP46109 303 aaKnown RBP23.54■■□□□ 1.36
PMS2P1-201ENST00000431037 PTCD1O75127 700 aaKnown RBP23.53■■□□□ 1.36
PMS2P1-201ENST00000431037 PIM2Q9P1W9 311 aa23.53■■□□□ 1.36
PMS2P1-201ENST00000431037 USP42Q9H9J4 1324 aaKnown RBP23.53■■□□□ 1.36
PMS2P1-201ENST00000431037 SCN11AQ9UI33 1791 aa23.52■■□□□ 1.36
PMS2P1-201ENST00000431037 PANK3Q9H999 370 aa23.51■■□□□ 1.35
PMS2P1-201ENST00000431037 KCNA3P22001 575 aa23.5■■□□□ 1.35
PMS2P1-201ENST00000431037 DALRD3Q5D0E6 543 aaKnown RBP23.5■■□□□ 1.35
PMS2P1-201ENST00000431037 AEBP1Q8IUX7 1158 aa23.5■■□□□ 1.35
PMS2P1-201ENST00000431037 NFATC2IPQ8NCF5 419 aa23.5■■□□□ 1.35
PMS2P1-201ENST00000431037 NMRK2Q9NPI5 230 aa23.5■■□□□ 1.35
PMS2P1-201ENST00000431037 WDR90Q96KV7 1748 aa23.5■■□□□ 1.35
PMS2P1-201ENST00000431037 ADAMTS7Q9UKP4 1686 aa23.49■■□□□ 1.35
PMS2P1-201ENST00000431037 C9orf131Q5VYM1 1079 aa23.49■■□□□ 1.35
PMS2P1-201ENST00000431037 MORC1Q86VD1 984 aa23.49■■□□□ 1.35
PMS2P1-201ENST00000431037 RBM46Q8TBY0 533 aaKnown RBP23.49■■□□□ 1.35
PMS2P1-201ENST00000431037 FKBP8Q14318 412 aa23.48■■□□□ 1.35
PMS2P1-201ENST00000431037 C16orf71Q8IYS4 520 aaPredicted RBP23.48■■□□□ 1.35
PMS2P1-201ENST00000431037 KDM2BQ8NHM5 1336 aa23.48■■□□□ 1.35
PMS2P1-201ENST00000431037 TNRC6CQ9HCJ0 1690 aaKnown RBP23.48■■□□□ 1.35
PMS2P1-201ENST00000431037 SULT6B1Q6IMI4 303 aa23.47■■□□□ 1.35
PMS2P1-201ENST00000431037 SRP68Q9UHB9 627 aaKnown RBP23.47■■□□□ 1.35
PMS2P1-201ENST00000431037 DDR1Q08345 913 aa23.46■■□□□ 1.35
PMS2P1-201ENST00000431037 DNAJC5GQ8N7S2 189 aa23.46■■□□□ 1.35
PMS2P1-201ENST00000431037 MRC1P22897 1456 aa23.45■■□□□ 1.34
PMS2P1-201ENST00000431037 FSTL1Q12841 308 aa23.44■■□□□ 1.34
PMS2P1-201ENST00000431037 KCPQ6ZWJ8 1503 aa23.43■■□□□ 1.34
PMS2P1-201ENST00000431037 POLRMTO00411 1230 aaKnown RBP23.43■■□□□ 1.34
PMS2P1-201ENST00000431037 ZPR1O75312 459 aa23.43■■□□□ 1.34
PMS2P1-201ENST00000431037 AKAP4Q5JQC9 854 aa23.43■■□□□ 1.34
PMS2P1-201ENST00000431037 INTS5Q6P9B9 1019 aaKnown RBP23.43■■□□□ 1.34
PMS2P1-201ENST00000431037 RNF181Q9P0P0 153 aa23.43■■□□□ 1.34
PMS2P1-201ENST00000431037 ZC3H4Q9UPT8 1303 aaKnown RBP23.42■■□□□ 1.34
PMS2P1-201ENST00000431037 IL13P35225 146 aa23.42■■□□□ 1.34
PMS2P1-201ENST00000431037 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
PMS2P1-201ENST00000431037 SBF1O95248 1867 aa23.41■■□□□ 1.34
PMS2P1-201ENST00000431037 SOS1Q07889 1333 aaPredicted RBP23.41■■□□□ 1.34
PMS2P1-201ENST00000431037 TM4SF1P30408 202 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms