RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 FLIIQ13045 1269 aa17.44■□□□□ 0.38
RBM39-212ENST00000429968 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
RBM39-212ENST00000429968 AXIN2Q9Y2T1 843 aa17.44■□□□□ 0.38
RBM39-212ENST00000429968 ALS2Q96Q42 1657 aa17.43■□□□□ 0.38
RBM39-212ENST00000429968 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
RBM39-212ENST00000429968 TBC1D9Q6ZT07 1266 aa17.43■□□□□ 0.38
RBM39-212ENST00000429968 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
RBM39-212ENST00000429968 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
RBM39-212ENST00000429968 DDX17Q92841 729 aaKnown RBP17.43■□□□□ 0.38
RBM39-212ENST00000429968 C1orf167Q5SNV9 1468 aa17.43■□□□□ 0.38
RBM39-212ENST00000429968 BECN1Q14457 450 aa17.42■□□□□ 0.38
RBM39-212ENST00000429968 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
RBM39-212ENST00000429968 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
RBM39-212ENST00000429968 PDE4CQ08493 712 aa17.42■□□□□ 0.38
RBM39-212ENST00000429968 RPAP2Q8IXW5 612 aaPredicted RBP17.41■□□□□ 0.38
RBM39-212ENST00000429968 KCNH5Q8NCM2 988 aa17.41■□□□□ 0.38
RBM39-212ENST00000429968 FKBP5Q13451 457 aaPredicted RBP17.41■□□□□ 0.38
RBM39-212ENST00000429968 PKNOX2Q96KN3 472 aa17.41■□□□□ 0.38
RBM39-212ENST00000429968 PHAXQ9H814 394 aaKnown RBP17.41■□□□□ 0.38
RBM39-212ENST00000429968 KIF1AQ12756 1690 aa17.41■□□□□ 0.38
RBM39-212ENST00000429968 NCAPD2Q15021 1401 aa17.4■□□□□ 0.38
RBM39-212ENST00000429968 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
RBM39-212ENST00000429968 KIF2CQ99661 725 aa17.4■□□□□ 0.38
RBM39-212ENST00000429968 STK31Q9BXU1 1019 aa17.4■□□□□ 0.38
RBM39-212ENST00000429968 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.38
RBM39-212ENST00000429968 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.38
RBM39-212ENST00000429968 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.38
RBM39-212ENST00000429968 RBM25P49756 843 aaKnown RBP17.39■□□□□ 0.37
RBM39-212ENST00000429968 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
RBM39-212ENST00000429968 CCT4P50991 539 aaKnown RBP17.38■□□□□ 0.37
RBM39-212ENST00000429968 TTC22Q5TAA0 569 aa17.38■□□□□ 0.37
RBM39-212ENST00000429968 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
RBM39-212ENST00000429968 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
RBM39-212ENST00000429968 EIF4A1P60842 406 aaKnown RBP17.37■□□□□ 0.37
RBM39-212ENST00000429968 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
RBM39-212ENST00000429968 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
RBM39-212ENST00000429968 PNMA6EA0A0J9YXQ4 647 aa17.36■□□□□ 0.37
RBM39-212ENST00000429968 MST1RQ04912 1400 aa17.36■□□□□ 0.37
RBM39-212ENST00000429968 ANXA1P04083 346 aa17.36■□□□□ 0.37
RBM39-212ENST00000429968 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
RBM39-212ENST00000429968 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
RBM39-212ENST00000429968 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
RBM39-212ENST00000429968 BABAM1Q9NWV8 329 aa17.35■□□□□ 0.37
RBM39-212ENST00000429968 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
RBM39-212ENST00000429968 TMEM94Q12767 1356 aa17.35■□□□□ 0.37
RBM39-212ENST00000429968 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
RBM39-212ENST00000429968 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
RBM39-212ENST00000429968 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
RBM39-212ENST00000429968 XIRP1Q702N8 1843 aaKnown RBP17.34■□□□□ 0.37
RBM39-212ENST00000429968 AKAP4Q5JQC9 854 aa17.34■□□□□ 0.37
RBM39-212ENST00000429968 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
RBM39-212ENST00000429968 COL18A1P39060 1754 aa17.34■□□□□ 0.37
RBM39-212ENST00000429968 GNAI2P04899 355 aa17.33■□□□□ 0.37
RBM39-212ENST00000429968 PLCB2Q00722 1185 aa17.33■□□□□ 0.37
RBM39-212ENST00000429968 TMEM132AQ24JP5 1023 aa17.33■□□□□ 0.37
RBM39-212ENST00000429968 TSHZ3Q63HK5 1081 aa17.33■□□□□ 0.37
RBM39-212ENST00000429968 USP44Q9H0E7 712 aa17.33■□□□□ 0.37
RBM39-212ENST00000429968 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
RBM39-212ENST00000429968 CDC45O75419 566 aa17.33■□□□□ 0.36
RBM39-212ENST00000429968 LRRFIP2Q9Y608 721 aaKnown RBP17.33■□□□□ 0.36
RBM39-212ENST00000429968 PXDNLA1KZ92 1463 aa17.33■□□□□ 0.36
RBM39-212ENST00000429968 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
RBM39-212ENST00000429968 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
RBM39-212ENST00000429968 SDSP20132 328 aa17.32■□□□□ 0.36
RBM39-212ENST00000429968 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
RBM39-212ENST00000429968 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
RBM39-212ENST00000429968 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
RBM39-212ENST00000429968 ERBB3P21860 1342 aa17.31■□□□□ 0.36
RBM39-212ENST00000429968 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
RBM39-212ENST00000429968 HSPA2P54652 639 aa17.3■□□□□ 0.36
RBM39-212ENST00000429968 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
RBM39-212ENST00000429968 TEFQ10587 303 aa17.3■□□□□ 0.36
RBM39-212ENST00000429968 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
RBM39-212ENST00000429968 C5P01031 1676 aa17.3■□□□□ 0.36
RBM39-212ENST00000429968 SCN11AQ9UI33 1791 aa17.3■□□□□ 0.36
RBM39-212ENST00000429968 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
RBM39-212ENST00000429968 ADCY9O60503 1353 aa17.28■□□□□ 0.36
RBM39-212ENST00000429968 HMMRO75330 724 aa17.28■□□□□ 0.36
RBM39-212ENST00000429968 ATP8B2P98198 1209 aa17.28■□□□□ 0.36
RBM39-212ENST00000429968 GNAI3P08754 354 aa17.27■□□□□ 0.36
RBM39-212ENST00000429968 PDE1AP54750 535 aa17.27■□□□□ 0.36
RBM39-212ENST00000429968 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
RBM39-212ENST00000429968 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
RBM39-212ENST00000429968 MEGF6O75095 1541 aa17.27■□□□□ 0.36
RBM39-212ENST00000429968 IBTKQ9P2D0 1353 aaPredicted RBP17.27■□□□□ 0.36
RBM39-212ENST00000429968 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.35
RBM39-212ENST00000429968 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.35
RBM39-212ENST00000429968 GSE1Q14687 1217 aa17.27■□□□□ 0.35
RBM39-212ENST00000429968 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.35
RBM39-212ENST00000429968 C1orf141Q5JVX7 400 aa17.27■□□□□ 0.35
RBM39-212ENST00000429968 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.35
RBM39-212ENST00000429968 SNX21Q969T3 373 aa17.27■□□□□ 0.35
RBM39-212ENST00000429968 AK9Q5TCS8 1911 aa17.26■□□□□ 0.35
RBM39-212ENST00000429968 ATF3P18847 181 aa17.26■□□□□ 0.35
RBM39-212ENST00000429968 DDIT3P35638 169 aa17.26■□□□□ 0.35
RBM39-212ENST00000429968 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
RBM39-212ENST00000429968 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
RBM39-212ENST00000429968 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
RBM39-212ENST00000429968 BEND3Q5T5X7 828 aa17.25■□□□□ 0.35
RBM39-212ENST00000429968 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms