RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 ITPRIPQ8IWB1 547 aa28.2■■■□□ 2.11
VSX1-205ENST00000429762 IFNL2Q8IZJ0 200 aa28.2■■■□□ 2.11
VSX1-205ENST00000429762 MS4A1P11836 297 aa28.19■■■□□ 2.1
VSX1-205ENST00000429762 IL2RBP14784 551 aa28.17■■■□□ 2.1
VSX1-205ENST00000429762 PLCH1Q4KWH8 1693 aa28.17■■■□□ 2.1
VSX1-205ENST00000429762 EIF4A1P60842 406 aaKnown RBP28.17■■■□□ 2.1
VSX1-205ENST00000429762 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
VSX1-205ENST00000429762 SLC4A2P04920 1241 aa28.15■■■□□ 2.1
VSX1-205ENST00000429762 CERKQ8TCT0 537 aa28.15■■■□□ 2.1
VSX1-205ENST00000429762 SHANK3Q9BYB0 1731 aa28.14■■■□□ 2.1
VSX1-205ENST00000429762 G2E3Q7L622 706 aa28.14■■■□□ 2.1
VSX1-205ENST00000429762 ARHGAP45Q92619 1136 aa28.14■■■□□ 2.1
VSX1-205ENST00000429762 PLEKHG2Q9H7P9 1386 aa28.14■■■□□ 2.09
VSX1-205ENST00000429762 KDM2BQ8NHM5 1336 aa28.13■■■□□ 2.09
VSX1-205ENST00000429762 SKAP1Q86WV1 359 aa28.12■■■□□ 2.09
VSX1-205ENST00000429762 SLC52A2Q9HAB3 445 aa28.12■■■□□ 2.09
VSX1-205ENST00000429762 SLC39A6Q13433 755 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 NFATC2IPQ8NCF5 419 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
VSX1-205ENST00000429762 PCDHB15Q9Y5E8 787 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 ABCC4O15439 1325 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 DCAF5Q96JK2 942 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 API5Q9BZZ5 524 aaKnown RBP28.11■■■□□ 2.09
VSX1-205ENST00000429762 DDX19BQ9UMR2 479 aa28.1■■■□□ 2.09
VSX1-205ENST00000429762 RGS12O14924 1447 aa28.1■■■□□ 2.09
VSX1-205ENST00000429762 IGHDP01880 384 aa28.1■■■□□ 2.09
VSX1-205ENST00000429762 EIF2S2P20042 333 aaKnown RBP28.1■■■□□ 2.09
VSX1-205ENST00000429762 HDGFL1Q5TGJ6 251 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 CCDC30Q5VVM6 783 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 STK31Q9BXU1 1019 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 NRAPQ86VF7 1730 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 PRAMEF22A3QJZ6 481 aa28.07■■■□□ 2.08
VSX1-205ENST00000429762 MRC1P22897 1456 aa28.07■■■□□ 2.08
VSX1-205ENST00000429762 HSP90AB1P08238 724 aaKnown RBP28.06■■■□□ 2.08
VSX1-205ENST00000429762 CENPQQ7L2Z9 268 aaPredicted RBP28.06■■■□□ 2.08
VSX1-205ENST00000429762 CABP4P57796 275 aa28.04■■■□□ 2.08
VSX1-205ENST00000429762 PTPRCP08575 1304 aa28.04■■■□□ 2.08
VSX1-205ENST00000429762 SOS1Q07889 1333 aaPredicted RBP28.04■■■□□ 2.08
VSX1-205ENST00000429762 DISP2A7MBM2 1401 aa28.03■■■□□ 2.08
VSX1-205ENST00000429762 ZNF790Q6PG37 636 aa28.03■■■□□ 2.08
VSX1-205ENST00000429762 TSHZ2Q9NRE2 1034 aa28.03■■■□□ 2.08
VSX1-205ENST00000429762 F6X3S4 739 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 AAMPQ13685 434 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 ZBTB40Q9NUA8 1239 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 WNK3Q9BYP7 1800 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 JCADQ9P266 1359 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 GIGYF1O75420 1035 aaPredicted RBP28.01■■■□□ 2.07
VSX1-205ENST00000429762 CHPF2Q9P2E5 772 aa28.01■■■□□ 2.07
VSX1-205ENST00000429762 C5P01031 1676 aa28.01■■■□□ 2.07
VSX1-205ENST00000429762 ANXA1P04083 346 aa28■■■□□ 2.07
VSX1-205ENST00000429762 FLIIQ13045 1269 aa28■■■□□ 2.07
VSX1-205ENST00000429762 HEG1Q9ULI3 1381 aa28■■■□□ 2.07
VSX1-205ENST00000429762 ZBTB7BO15156 539 aaPredicted RBP28■■■□□ 2.07
VSX1-205ENST00000429762 C1orf115Q9H7X2 142 aa28■■■□□ 2.07
VSX1-205ENST00000429762 PHAXQ9H814 394 aaKnown RBP28■■■□□ 2.07
VSX1-205ENST00000429762 TOGARAM1Q9Y4F4 1720 aa28■■■□□ 2.07
VSX1-205ENST00000429762 HOXB7P09629 217 aa27.99■■■□□ 2.07
VSX1-205ENST00000429762 FKBP5Q13451 457 aaPredicted RBP27.98■■■□□ 2.07
VSX1-205ENST00000429762 NKX1-1Q15270 411 aaPredicted RBP27.98■■■□□ 2.07
VSX1-205ENST00000429762 SLC4A10Q6U841 1118 aa27.98■■■□□ 2.07
VSX1-205ENST00000429762 CACNA1FO60840 1977 aa27.97■■■□□ 2.07
VSX1-205ENST00000429762 ZNF496Q96IT1 587 aaPredicted RBP27.97■■■□□ 2.07
VSX1-205ENST00000429762 C8orf37Q96NL8 207 aa27.97■■■□□ 2.07
VSX1-205ENST00000429762 SLIT2O94813 1529 aa27.97■■■□□ 2.07
VSX1-205ENST00000429762 INTS3Q68E01 1043 aaKnown RBP27.97■■■□□ 2.07
VSX1-205ENST00000429762 NWD2Q9ULI1 1742 aa27.96■■■□□ 2.07
VSX1-205ENST00000429762 SPATA31A1Q5TZJ5 1347 aa27.96■■■□□ 2.07
VSX1-205ENST00000429762 CCDC9Q9Y3X0 531 aaKnown RBP27.96■■■□□ 2.07
VSX1-205ENST00000429762 TTC5Q8N0Z6 440 aa27.95■■■□□ 2.07
VSX1-205ENST00000429762 PROSER3Q2NL68 480 aa27.94■■■□□ 2.06
VSX1-205ENST00000429762 LRP6O75581 1613 aa27.93■■■□□ 2.06
VSX1-205ENST00000429762 HSPA1LP34931 641 aa27.93■■■□□ 2.06
VSX1-205ENST00000429762 ERVV-2B6SEH9 535 aa27.93■■■□□ 2.06
VSX1-205ENST00000429762 NGLY1Q96IV0 654 aa27.91■■■□□ 2.06
VSX1-205ENST00000429762 RWDD1Q9H446 243 aaPredicted RBP27.91■■■□□ 2.06
VSX1-205ENST00000429762 SPATA31A5Q5VU36 1347 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 SPATA31A7Q8IWB4 1347 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 GLI3P10071 1580 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 EXOC5O00471 708 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 FMNL2Q96PY5 1086 aa27.89■■■□□ 2.06
VSX1-205ENST00000429762 PAPPAQ13219 1627 aa27.88■■■□□ 2.05
VSX1-205ENST00000429762 MEIS3Q99687 375 aa27.88■■■□□ 2.05
VSX1-205ENST00000429762 DBF4Q9UBU7 674 aaPredicted RBP27.88■■■□□ 2.05
VSX1-205ENST00000429762 TNS2Q63HR2 1409 aa27.88■■■□□ 2.05
VSX1-205ENST00000429762 UNC5CLQ8IV45 518 aa27.87■■■□□ 2.05
VSX1-205ENST00000429762 USP16Q9Y5T5 823 aa27.87■■■□□ 2.05
VSX1-205ENST00000429762 PIP4K2AP48426 406 aaPredicted RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 RGS3P49796 1198 aa27.86■■■□□ 2.05
VSX1-205ENST00000429762 CHMP4BQ9H444 224 aaKnown RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 UBR2Q8IWV8 1755 aa27.86■■■□□ 2.05
VSX1-205ENST00000429762 SNRPA1P09661 255 aaKnown RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 CCT4P50991 539 aaKnown RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 TMOD3Q9NYL9 352 aa27.86■■■□□ 2.05
VSX1-205ENST00000429762 ITGB4P16144 1822 aa27.85■■■□□ 2.05
VSX1-205ENST00000429762 BCL9LQ86UU0 1499 aa27.85■■■□□ 2.05
VSX1-205ENST00000429762 KCPQ6ZWJ8 1503 aa27.85■■■□□ 2.05
VSX1-205ENST00000429762 HDAC1Q13547 482 aaPredicted RBP27.85■■■□□ 2.05
VSX1-205ENST00000429762 CHMP4AQ9BY43 222 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms