RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 ATP7BP35670 1465 aa13.65□□□□□ -0.22
HIPK2-203ENST00000428878 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
HIPK2-203ENST00000428878 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
HIPK2-203ENST00000428878 IQSEC2Q5JU85 1478 aa13.65□□□□□ -0.22
HIPK2-203ENST00000428878 UBR1Q8IWV7 1749 aa13.65□□□□□ -0.22
HIPK2-203ENST00000428878 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
HIPK2-203ENST00000428878 GNAI2P04899 355 aa13.64□□□□□ -0.23
HIPK2-203ENST00000428878 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
HIPK2-203ENST00000428878 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
HIPK2-203ENST00000428878 XAGE3Q8WTP9 111 aa13.64□□□□□ -0.23
HIPK2-203ENST00000428878 A1BGP04217 495 aa13.64□□□□□ -0.23
HIPK2-203ENST00000428878 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
HIPK2-203ENST00000428878 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
HIPK2-203ENST00000428878 ADGRL3Q9HAR2 1447 aa13.63□□□□□ -0.23
HIPK2-203ENST00000428878 WWC3Q9ULE0 1092 aa13.63□□□□□ -0.23
HIPK2-203ENST00000428878 IL2RBP14784 551 aa13.63□□□□□ -0.23
HIPK2-203ENST00000428878 PROSER3Q2NL68 480 aa13.63□□□□□ -0.23
HIPK2-203ENST00000428878 CHL1O00533 1208 aa13.63□□□□□ -0.23
HIPK2-203ENST00000428878 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
HIPK2-203ENST00000428878 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
HIPK2-203ENST00000428878 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
HIPK2-203ENST00000428878 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
HIPK2-203ENST00000428878 TBC1D2BQ9UPU7 963 aa13.62□□□□□ -0.23
HIPK2-203ENST00000428878 CCDC24Q8N4L8 307 aa13.62□□□□□ -0.23
HIPK2-203ENST00000428878 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
HIPK2-203ENST00000428878 PA2G4Q9UQ80 394 aaKnown RBP13.62□□□□□ -0.23
HIPK2-203ENST00000428878 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
HIPK2-203ENST00000428878 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
HIPK2-203ENST00000428878 CEP170BQ9Y4F5 1589 aaPredicted RBP13.61□□□□□ -0.23
HIPK2-203ENST00000428878 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
HIPK2-203ENST00000428878 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
HIPK2-203ENST00000428878 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
HIPK2-203ENST00000428878 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
HIPK2-203ENST00000428878 PHF14O94880 888 aa13.6□□□□□ -0.23
HIPK2-203ENST00000428878 SMIM5Q71RC9 77 aa13.6□□□□□ -0.23
HIPK2-203ENST00000428878 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
HIPK2-203ENST00000428878 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
HIPK2-203ENST00000428878 DLC1Q96QB1 1528 aa13.6□□□□□ -0.23
HIPK2-203ENST00000428878 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
HIPK2-203ENST00000428878 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
HIPK2-203ENST00000428878 USP19O94966 1318 aa13.6□□□□□ -0.23
HIPK2-203ENST00000428878 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
HIPK2-203ENST00000428878 ERBB3P21860 1342 aa13.6□□□□□ -0.23
HIPK2-203ENST00000428878 IFIT2P09913 472 aaKnown RBP13.59□□□□□ -0.23
HIPK2-203ENST00000428878 DDB1Q16531 1140 aa13.59□□□□□ -0.23
HIPK2-203ENST00000428878 DBF4Q9UBU7 674 aaPredicted RBP13.59□□□□□ -0.23
HIPK2-203ENST00000428878 GNAI3P08754 354 aa13.59□□□□□ -0.23
HIPK2-203ENST00000428878 BECN1Q14457 450 aa13.59□□□□□ -0.23
HIPK2-203ENST00000428878 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
HIPK2-203ENST00000428878 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
HIPK2-203ENST00000428878 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
HIPK2-203ENST00000428878 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
HIPK2-203ENST00000428878 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.23
HIPK2-203ENST00000428878 INSRP06213 1382 aa13.58□□□□□ -0.23
HIPK2-203ENST00000428878 CCT4P50991 539 aaKnown RBP13.58□□□□□ -0.24
HIPK2-203ENST00000428878 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
HIPK2-203ENST00000428878 BACH2Q9BYV9 841 aa13.58□□□□□ -0.24
HIPK2-203ENST00000428878 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
HIPK2-203ENST00000428878 IL16Q14005 1332 aa13.58□□□□□ -0.24
HIPK2-203ENST00000428878 A0A087WZG4 1122 aa13.58□□□□□ -0.24
HIPK2-203ENST00000428878 CT47B1P0C2W7 299 aaPredicted RBP13.58□□□□□ -0.24
HIPK2-203ENST00000428878 SEC24BO95487 1268 aa13.57□□□□□ -0.24
HIPK2-203ENST00000428878 FGD1P98174 961 aa13.57□□□□□ -0.24
HIPK2-203ENST00000428878 DNAJC2Q99543 621 aaKnown RBP13.57□□□□□ -0.24
HIPK2-203ENST00000428878 TRMT2AQ8IZ69 625 aaKnown RBP13.57□□□□□ -0.24
HIPK2-203ENST00000428878 FRAT2O75474 233 aaPredicted RBP13.57□□□□□ -0.24
HIPK2-203ENST00000428878 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
HIPK2-203ENST00000428878 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
HIPK2-203ENST00000428878 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
HIPK2-203ENST00000428878 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
HIPK2-203ENST00000428878 NCLP19338 710 aaKnown RBP13.56□□□□□ -0.24
HIPK2-203ENST00000428878 STK11IPQ8N1F8 1099 aa13.56□□□□□ -0.24
HIPK2-203ENST00000428878 CYP27B1O15528 508 aa13.56□□□□□ -0.24
HIPK2-203ENST00000428878 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
HIPK2-203ENST00000428878 C1orf167Q5SNV9 1468 aa13.56□□□□□ -0.24
HIPK2-203ENST00000428878 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
HIPK2-203ENST00000428878 DTNBO60941 627 aa13.55□□□□□ -0.24
HIPK2-203ENST00000428878 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
HIPK2-203ENST00000428878 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
HIPK2-203ENST00000428878 PHKG2P15735 406 aa13.55□□□□□ -0.24
HIPK2-203ENST00000428878 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
HIPK2-203ENST00000428878 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
HIPK2-203ENST00000428878 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
HIPK2-203ENST00000428878 KIAA1211Q6ZU35 1233 aa13.55□□□□□ -0.24
HIPK2-203ENST00000428878 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
HIPK2-203ENST00000428878 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
HIPK2-203ENST00000428878 GZF1Q9H116 711 aaPredicted RBP13.54□□□□□ -0.24
HIPK2-203ENST00000428878 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
HIPK2-203ENST00000428878 PIK3R4Q99570 1358 aa13.54□□□□□ -0.24
HIPK2-203ENST00000428878 AACSQ86V21 672 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
HIPK2-203ENST00000428878 DIP2AQ14689 1571 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 LRRCC1Q9C099 1032 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 DCAF5Q96JK2 942 aa13.53□□□□□ -0.24
HIPK2-203ENST00000428878 CHMP4AQ9BY43 222 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms