RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 ZCCHC11Q5TAX3 1644 aaKnown RBP19.77■□□□□ 0.76
RHBDF1-204ENST00000428730 RGS12O14924 1447 aa19.77■□□□□ 0.76
RHBDF1-204ENST00000428730 EMILIN1Q9Y6C2 1016 aa19.77■□□□□ 0.75
RHBDF1-204ENST00000428730 RILPL2Q969X0 211 aa19.76■□□□□ 0.75
RHBDF1-204ENST00000428730 TMEM51Q9NW97 253 aa19.76■□□□□ 0.75
RHBDF1-204ENST00000428730 EXOC6BQ9Y2D4 811 aa19.76■□□□□ 0.75
RHBDF1-204ENST00000428730 IL25Q9H293 177 aa19.76■□□□□ 0.75
RHBDF1-204ENST00000428730 FUCA2Q9BTY2 467 aa19.75■□□□□ 0.75
RHBDF1-204ENST00000428730 PTGS1P23219 599 aa19.75■□□□□ 0.75
RHBDF1-204ENST00000428730 NPATQ14207 1427 aa19.74■□□□□ 0.75
RHBDF1-204ENST00000428730 MCCP23508 829 aa19.74■□□□□ 0.75
RHBDF1-204ENST00000428730 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.74■□□□□ 0.75
RHBDF1-204ENST00000428730 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
RHBDF1-204ENST00000428730 CABP1Q9NZU7 370 aa19.74■□□□□ 0.75
RHBDF1-204ENST00000428730 TRIM6-TRIM34B2RNG4 842 aa19.73■□□□□ 0.75
RHBDF1-204ENST00000428730 GGT6Q6P531 493 aa19.73■□□□□ 0.75
RHBDF1-204ENST00000428730 TMEM87AQ8NBN3 555 aa19.73■□□□□ 0.75
RHBDF1-204ENST00000428730 C16orf45Q96MC5 204 aaPredicted RBP19.73■□□□□ 0.75
RHBDF1-204ENST00000428730 VGLL3A8MV65 326 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 UBE2HP62256 183 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 UNC5CLQ8IV45 518 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 CHMLP26374 656 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 LRMPQ12912 555 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 RIMS2Q9UQ26 1411 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 OSBPL3Q9H4L5 887 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 OGFRQ9NZT2 677 aa19.72■□□□□ 0.75
RHBDF1-204ENST00000428730 CTNNA3Q9UI47 895 aa19.71■□□□□ 0.75
RHBDF1-204ENST00000428730 ZSCAN22P10073 491 aaPredicted RBP19.71■□□□□ 0.75
RHBDF1-204ENST00000428730 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.75
RHBDF1-204ENST00000428730 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
RHBDF1-204ENST00000428730 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
RHBDF1-204ENST00000428730 FEZ1Q99689 392 aa19.7■□□□□ 0.74
RHBDF1-204ENST00000428730 ABCC3O15438 1527 aa19.7■□□□□ 0.74
RHBDF1-204ENST00000428730 F6X3S4 739 aa19.7■□□□□ 0.74
RHBDF1-204ENST00000428730 SYT1P21579 422 aa19.69■□□□□ 0.74
RHBDF1-204ENST00000428730 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
RHBDF1-204ENST00000428730 IL13P35225 146 aa19.69■□□□□ 0.74
RHBDF1-204ENST00000428730 ANAPC15P60006 121 aa19.69■□□□□ 0.74
RHBDF1-204ENST00000428730 CHMP3Q9Y3E7 222 aa19.69■□□□□ 0.74
RHBDF1-204ENST00000428730 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
RHBDF1-204ENST00000428730 NRBP1Q9UHY1 535 aa19.68■□□□□ 0.74
RHBDF1-204ENST00000428730 RPGRIP1LQ68CZ1 1315 aa19.67■□□□□ 0.74
RHBDF1-204ENST00000428730 STX6O43752 255 aa19.67■□□□□ 0.74
RHBDF1-204ENST00000428730 DNM1Q05193 864 aaKnown RBP19.67■□□□□ 0.74
RHBDF1-204ENST00000428730 PDE4CQ08493 712 aa19.67■□□□□ 0.74
RHBDF1-204ENST00000428730 ZRANB1Q9UGI0 708 aa19.67■□□□□ 0.74
RHBDF1-204ENST00000428730 SALL3Q9BXA9 1300 aa19.67■□□□□ 0.74
RHBDF1-204ENST00000428730 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 F13A1P00488 732 aa19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 SLFN14P0C7P3 912 aa19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 CCDC186Q7Z3E2 898 aa19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 LUZP1Q86V48 1076 aa19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 HMMRO75330 724 aa19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 CPA1P15085 419 aa19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 MAP4K4O95819 1239 aaPredicted RBP19.66■□□□□ 0.74
RHBDF1-204ENST00000428730 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
RHBDF1-204ENST00000428730 DDX41Q9UJV9 622 aaKnown RBP19.65■□□□□ 0.74
RHBDF1-204ENST00000428730 GOLGA6L6A8MZA4 724 aa19.65■□□□□ 0.74
RHBDF1-204ENST00000428730 CAMK4Q16566 473 aa19.65■□□□□ 0.74
RHBDF1-204ENST00000428730 G2E3Q7L622 706 aa19.65■□□□□ 0.74
RHBDF1-204ENST00000428730 LARGE1O95461 756 aa19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 MCM10Q7L590 875 aa19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 TNNT1P13805 278 aa19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 AK2P54819 239 aa19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 RRS1Q15050 365 aaKnown RBP19.64■□□□□ 0.73
RHBDF1-204ENST00000428730 LMOD3Q0VAK6 560 aa19.63■□□□□ 0.73
RHBDF1-204ENST00000428730 TPM3P06753 285 aa19.63■□□□□ 0.73
RHBDF1-204ENST00000428730 RUFY3Q7L099 469 aa19.63■□□□□ 0.73
RHBDF1-204ENST00000428730 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.63■□□□□ 0.73
RHBDF1-204ENST00000428730 V9GYY5 206 aaPredicted RBP19.63■□□□□ 0.73
RHBDF1-204ENST00000428730 KIAA0232Q92628 1395 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 PNMA6EA0A0J9YXQ4 647 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 LRRCC1Q9C099 1032 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 MIS18AQ9NYP9 233 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 LMTK2Q8IWU2 1503 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 SMTNL1A8MU46 457 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 HSPA4P34932 840 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 GABPB1Q06547 395 aaPredicted RBP19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 ZNF592Q92610 1267 aa19.62■□□□□ 0.73
RHBDF1-204ENST00000428730 CCDC192P0DO97 292 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 KCNJ4P48050 445 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 TAF3Q5VWG9 929 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 AEBP1Q8IUX7 1158 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 RASEFQ8IZ41 740 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 NAP1L2Q9ULW6 460 aaPredicted RBP19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 SMC3Q9UQE7 1217 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 DLG5Q8TDM6 1919 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 NME9Q86XW9 330 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 KIF18AQ8NI77 898 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 CKAP2LQ8IYA6 745 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
RHBDF1-204ENST00000428730 ST7Q9NRC1 585 aa19.6■□□□□ 0.73
RHBDF1-204ENST00000428730 SNX14Q9Y5W7 946 aa19.6■□□□□ 0.73
RHBDF1-204ENST00000428730 CCDC83Q8IWF9 413 aa19.6■□□□□ 0.73
RHBDF1-204ENST00000428730 CCDC112Q8NEF3 446 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms