RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 MTHFSP49914 203 aa13.99□□□□□ -0.17
ZNF3-208ENST00000428683 CABP4P57796 275 aa13.99□□□□□ -0.17
ZNF3-208ENST00000428683 PER1O15534 1290 aaPredicted RBP13.98□□□□□ -0.17
ZNF3-208ENST00000428683 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
ZNF3-208ENST00000428683 ZNF784Q8NCA9 323 aaPredicted RBP13.98□□□□□ -0.17
ZNF3-208ENST00000428683 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
ZNF3-208ENST00000428683 TUBGCP6Q96RT7 1819 aa13.97□□□□□ -0.17
ZNF3-208ENST00000428683 HMOX1P09601 288 aa13.97□□□□□ -0.17
ZNF3-208ENST00000428683 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
ZNF3-208ENST00000428683 ITGB4P16144 1822 aa13.97□□□□□ -0.17
ZNF3-208ENST00000428683 QSER1Q2KHR3 1735 aa13.96□□□□□ -0.17
ZNF3-208ENST00000428683 SSFA2P28290 1259 aa13.96□□□□□ -0.17
ZNF3-208ENST00000428683 C5P01031 1676 aa13.95□□□□□ -0.18
ZNF3-208ENST00000428683 PTCD1O75127 700 aaKnown RBP13.95□□□□□ -0.18
ZNF3-208ENST00000428683 YBX3P16989 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZNF3-208ENST00000428683 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
ZNF3-208ENST00000428683 WWC3Q9ULE0 1092 aa13.95□□□□□ -0.18
ZNF3-208ENST00000428683 C4BP0C0L5 1744 aa13.94□□□□□ -0.18
ZNF3-208ENST00000428683 RTCBQ9Y3I0 505 aaKnown RBP13.94□□□□□ -0.18
ZNF3-208ENST00000428683 CD2APQ9Y5K6 639 aa13.94□□□□□ -0.18
ZNF3-208ENST00000428683 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
ZNF3-208ENST00000428683 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
ZNF3-208ENST00000428683 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
ZNF3-208ENST00000428683 PLEKHG2Q9H7P9 1386 aa13.93□□□□□ -0.18
ZNF3-208ENST00000428683 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
ZNF3-208ENST00000428683 ARHGEF1Q92888 912 aaKnown RBP13.92□□□□□ -0.18
ZNF3-208ENST00000428683 COL24A1Q17RW2 1714 aa13.91□□□□□ -0.18
ZNF3-208ENST00000428683 AKAP4Q5JQC9 854 aa13.91□□□□□ -0.18
ZNF3-208ENST00000428683 RC3H1Q5TC82 1133 aaKnown RBP13.91□□□□□ -0.18
ZNF3-208ENST00000428683 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
ZNF3-208ENST00000428683 KDRP35968 1356 aa13.91□□□□□ -0.18
ZNF3-208ENST00000428683 RPS6KA4O75676 772 aa13.9□□□□□ -0.18
ZNF3-208ENST00000428683 MMP10P09238 476 aa13.9□□□□□ -0.18
ZNF3-208ENST00000428683 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.18
ZNF3-208ENST00000428683 U2SURPO15042 1029 aaKnown RBP13.89□□□□□ -0.19
ZNF3-208ENST00000428683 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
ZNF3-208ENST00000428683 RFC4P35249 363 aa13.89□□□□□ -0.19
ZNF3-208ENST00000428683 SLC39A6Q13433 755 aa13.89□□□□□ -0.19
ZNF3-208ENST00000428683 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
ZNF3-208ENST00000428683 CRKLP46109 303 aaKnown RBP13.88□□□□□ -0.19
ZNF3-208ENST00000428683 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
ZNF3-208ENST00000428683 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
ZNF3-208ENST00000428683 GYS1P13807 737 aa13.87□□□□□ -0.19
ZNF3-208ENST00000428683 UTRNP46939 3433 aa13.87□□□□□ -0.19
ZNF3-208ENST00000428683 UBR3Q6ZT12 1888 aa13.87□□□□□ -0.19
ZNF3-208ENST00000428683 ADRA2BP18089 450 aa13.86□□□□□ -0.19
ZNF3-208ENST00000428683 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
ZNF3-208ENST00000428683 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
ZNF3-208ENST00000428683 PARP3Q9Y6F1 533 aa13.85□□□□□ -0.19
ZNF3-208ENST00000428683 A0A0G2JLW4 131 aa13.84□□□□□ -0.19
ZNF3-208ENST00000428683 INTS5Q6P9B9 1019 aaKnown RBP13.84□□□□□ -0.19
ZNF3-208ENST00000428683 C1QTNF8P60827 252 aa13.83□□□□□ -0.2
ZNF3-208ENST00000428683 FKBP8Q14318 412 aa13.83□□□□□ -0.2
ZNF3-208ENST00000428683 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
ZNF3-208ENST00000428683 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
ZNF3-208ENST00000428683 CHD4Q14839 1912 aa13.82□□□□□ -0.2
ZNF3-208ENST00000428683 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
ZNF3-208ENST00000428683 BCS1LQ9Y276 419 aa13.82□□□□□ -0.2
ZNF3-208ENST00000428683 GIGYF1O75420 1035 aaPredicted RBP13.81□□□□□ -0.2
ZNF3-208ENST00000428683 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
ZNF3-208ENST00000428683 DPEP1P16444 411 aa13.81□□□□□ -0.2
ZNF3-208ENST00000428683 TGFB2P61812 414 aa13.81□□□□□ -0.2
ZNF3-208ENST00000428683 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
ZNF3-208ENST00000428683 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
ZNF3-208ENST00000428683 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
ZNF3-208ENST00000428683 ZPR1O75312 459 aa13.8□□□□□ -0.2
ZNF3-208ENST00000428683 TEFQ10587 303 aa13.8□□□□□ -0.2
ZNF3-208ENST00000428683 TTC5Q8N0Z6 440 aa13.8□□□□□ -0.2
ZNF3-208ENST00000428683 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
ZNF3-208ENST00000428683 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
ZNF3-208ENST00000428683 PHACTR3Q96KR7 559 aa13.8□□□□□ -0.2
ZNF3-208ENST00000428683 USP42Q9H9J4 1324 aaKnown RBP13.8□□□□□ -0.2
ZNF3-208ENST00000428683 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
ZNF3-208ENST00000428683 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
ZNF3-208ENST00000428683 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
ZNF3-208ENST00000428683 PRKAR2BP31323 418 aa13.79□□□□□ -0.2
ZNF3-208ENST00000428683 DDR1Q08345 913 aa13.79□□□□□ -0.2
ZNF3-208ENST00000428683 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
ZNF3-208ENST00000428683 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
ZNF3-208ENST00000428683 FCHSD2O94868 740 aa13.78□□□□□ -0.2
ZNF3-208ENST00000428683 U2AF1L5P0DN76 240 aaPredicted RBP13.78□□□□□ -0.2
ZNF3-208ENST00000428683 U2AF1Q01081 240 aaKnown RBP eCLIP13.78□□□□□ -0.2
ZNF3-208ENST00000428683 ARHGAP27Q6ZUM4 889 aa13.78□□□□□ -0.2
ZNF3-208ENST00000428683 SOS1Q07889 1333 aaPredicted RBP13.78□□□□□ -0.2
ZNF3-208ENST00000428683 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
ZNF3-208ENST00000428683 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
ZNF3-208ENST00000428683 MYH14Q7Z406 1995 aaKnown RBP13.78□□□□□ -0.2
ZNF3-208ENST00000428683 PXDNLA1KZ92 1463 aa13.77□□□□□ -0.21
ZNF3-208ENST00000428683 TM4SF1P30408 202 aa13.77□□□□□ -0.21
ZNF3-208ENST00000428683 ZNF831Q5JPB2 1677 aa13.77□□□□□ -0.21
ZNF3-208ENST00000428683 VSIG10Q8N0Z9 540 aa13.77□□□□□ -0.21
ZNF3-208ENST00000428683 ZNF496Q96IT1 587 aaPredicted RBP13.77□□□□□ -0.21
ZNF3-208ENST00000428683 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
ZNF3-208ENST00000428683 GPBP1L1Q9HC44 474 aaPredicted RBP13.77□□□□□ -0.21
ZNF3-208ENST00000428683 ATP10DQ9P241 1426 aa13.77□□□□□ -0.21
ZNF3-208ENST00000428683 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
ZNF3-208ENST00000428683 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
ZNF3-208ENST00000428683 POLRMTO00411 1230 aaKnown RBP13.76□□□□□ -0.21
ZNF3-208ENST00000428683 KCNA3P22001 575 aa13.76□□□□□ -0.21
ZNF3-208ENST00000428683 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms