RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 ATP6V1AP38606 617 aa23.83■■□□□ 1.41
DDR1-235ENST00000428153 MORC1Q86VD1 984 aa23.83■■□□□ 1.41
DDR1-235ENST00000428153 AMIGO3Q86WK7 504 aa23.83■■□□□ 1.41
DDR1-235ENST00000428153 KDRP35968 1356 aa23.82■■□□□ 1.4
DDR1-235ENST00000428153 KNSTRNQ9Y448 316 aa23.82■■□□□ 1.4
DDR1-235ENST00000428153 YBX3P16989 372 aaKnown RBP eCLIP23.81■■□□□ 1.4
DDR1-235ENST00000428153 ITPK1Q13572 414 aa23.81■■□□□ 1.4
DDR1-235ENST00000428153 PHF14O94880 888 aa23.8■■□□□ 1.4
DDR1-235ENST00000428153 GNPATO15228 680 aa23.79■■□□□ 1.4
DDR1-235ENST00000428153 RC3H1Q5TC82 1133 aaKnown RBP23.78■■□□□ 1.4
DDR1-235ENST00000428153 ADRA2BP18089 450 aa23.77■■□□□ 1.4
DDR1-235ENST00000428153 ZNF530Q6P9A1 599 aaPredicted RBP23.77■■□□□ 1.4
DDR1-235ENST00000428153 KDM6AO15550 1401 aaPredicted RBP23.76■■□□□ 1.39
DDR1-235ENST00000428153 C1QTNF8P60827 252 aa23.76■■□□□ 1.39
DDR1-235ENST00000428153 AMER1Q5JTC6 1135 aaPredicted RBP23.75■■□□□ 1.39
DDR1-235ENST00000428153 RTCBQ9Y3I0 505 aaKnown RBP23.75■■□□□ 1.39
DDR1-235ENST00000428153 CNTNAP4Q9C0A0 1308 aa23.75■■□□□ 1.39
DDR1-235ENST00000428153 CABP4P57796 275 aa23.74■■□□□ 1.39
DDR1-235ENST00000428153 C1orf141Q5JVX7 400 aa23.74■■□□□ 1.39
DDR1-235ENST00000428153 IL13P35225 146 aa23.73■■□□□ 1.39
DDR1-235ENST00000428153 MTHFSP49914 203 aa23.73■■□□□ 1.39
DDR1-235ENST00000428153 SLC4A9Q96Q91 983 aa23.73■■□□□ 1.39
DDR1-235ENST00000428153 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
DDR1-235ENST00000428153 GIGYF1O75420 1035 aaPredicted RBP23.72■■□□□ 1.39
DDR1-235ENST00000428153 TRAPPC3LQ5T215 181 aa23.72■■□□□ 1.39
DDR1-235ENST00000428153 SULT6B1Q6IMI4 303 aa23.72■■□□□ 1.39
DDR1-235ENST00000428153 SMIM5Q71RC9 77 aa23.72■■□□□ 1.39
DDR1-235ENST00000428153 AEBP1Q8IUX7 1158 aa23.72■■□□□ 1.39
DDR1-235ENST00000428153 NLGN1Q8N2Q7 840 aa23.72■■□□□ 1.39
DDR1-235ENST00000428153 RBM42Q9BTD8 480 aaKnown RBP23.71■■□□□ 1.39
DDR1-235ENST00000428153 KIF7Q2M1P5 1343 aa23.7■■□□□ 1.38
DDR1-235ENST00000428153 CICQ96RK0 1608 aaPredicted RBP23.7■■□□□ 1.38
DDR1-235ENST00000428153 RPS6KA4O75676 772 aa23.69■■□□□ 1.38
DDR1-235ENST00000428153 KIF13BQ9NQT8 1826 aa23.68■■□□□ 1.38
DDR1-235ENST00000428153 MMP10P09238 476 aa23.68■■□□□ 1.38
DDR1-235ENST00000428153 AKAP4Q5JQC9 854 aa23.67■■□□□ 1.38
DDR1-235ENST00000428153 ARHGEF1Q92888 912 aaKnown RBP23.67■■□□□ 1.38
DDR1-235ENST00000428153 ADCY9O60503 1353 aa23.66■■□□□ 1.38
DDR1-235ENST00000428153 SCN11AQ9UI33 1791 aa23.66■■□□□ 1.38
DDR1-235ENST00000428153 TGFB2P61812 414 aa23.66■■□□□ 1.38
DDR1-235ENST00000428153 NFATC2IPQ8NCF5 419 aa23.66■■□□□ 1.38
DDR1-235ENST00000428153 PER1O15534 1290 aaPredicted RBP23.65■■□□□ 1.38
DDR1-235ENST00000428153 ATP10DQ9P241 1426 aa23.65■■□□□ 1.38
DDR1-235ENST00000428153 MYH14Q7Z406 1995 aaKnown RBP23.65■■□□□ 1.38
DDR1-235ENST00000428153 RFC4P35249 363 aa23.64■■□□□ 1.37
DDR1-235ENST00000428153 SENP3-EIF4A1A0A087X0R7 540 aa23.63■■□□□ 1.37
DDR1-235ENST00000428153 GYS1P13807 737 aa23.63■■□□□ 1.37
DDR1-235ENST00000428153 C10orf71Q711Q0 1435 aa23.63■■□□□ 1.37
DDR1-235ENST00000428153 NPC1L1Q9UHC9 1359 aa23.63■■□□□ 1.37
DDR1-235ENST00000428153 PTCD1O75127 700 aaKnown RBP23.62■■□□□ 1.37
DDR1-235ENST00000428153 PXDNLA1KZ92 1463 aa23.62■■□□□ 1.37
DDR1-235ENST00000428153 MRC1P22897 1456 aa23.62■■□□□ 1.37
DDR1-235ENST00000428153 CRKLP46109 303 aaKnown RBP23.61■■□□□ 1.37
DDR1-235ENST00000428153 SLC52A2Q9HAB3 445 aa23.61■■□□□ 1.37
DDR1-235ENST00000428153 C4AP0C0L4 1744 aa23.61■■□□□ 1.37
DDR1-235ENST00000428153 CEP350Q5VT06 3117 aa23.61■■□□□ 1.37
DDR1-235ENST00000428153 CCDC87Q9NVE4 849 aa23.6■■□□□ 1.37
DDR1-235ENST00000428153 TJP1Q07157 1748 aa23.59■■□□□ 1.37
DDR1-235ENST00000428153 KIAA1551Q9HCM1 1747 aa23.59■■□□□ 1.37
DDR1-235ENST00000428153 PARP3Q9Y6F1 533 aa23.59■■□□□ 1.37
DDR1-235ENST00000428153 DIAPH1O60610 1272 aaKnown RBP23.58■■□□□ 1.37
DDR1-235ENST00000428153 GPBP1L1Q9HC44 474 aaPredicted RBP23.58■■□□□ 1.37
DDR1-235ENST00000428153 ADAMTS7Q9UKP4 1686 aa23.57■■□□□ 1.36
DDR1-235ENST00000428153 USP42Q9H9J4 1324 aaKnown RBP23.57■■□□□ 1.36
DDR1-235ENST00000428153 RNMTO43148 476 aaKnown RBP23.56■■□□□ 1.36
DDR1-235ENST00000428153 HMOX1P09601 288 aa23.54■■□□□ 1.36
DDR1-235ENST00000428153 INTS5Q6P9B9 1019 aaKnown RBP23.54■■□□□ 1.36
DDR1-235ENST00000428153 LGR6Q9HBX8 967 aa23.54■■□□□ 1.36
DDR1-235ENST00000428153 N4BP2Q86UW6 1770 aaPredicted RBP23.53■■□□□ 1.36
DDR1-235ENST00000428153 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
DDR1-235ENST00000428153 BRCA1P38398 1863 aaKnown RBP23.52■■□□□ 1.36
DDR1-235ENST00000428153 MTHFSDQ2M296 383 aaKnown RBP23.52■■□□□ 1.36
DDR1-235ENST00000428153 CC2D1BQ5T0F9 858 aaKnown RBP23.52■■□□□ 1.36
DDR1-235ENST00000428153 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
DDR1-235ENST00000428153 A0A0G2JLW4 131 aa23.51■■□□□ 1.35
DDR1-235ENST00000428153 WWC3Q9ULE0 1092 aa23.51■■□□□ 1.35
DDR1-235ENST00000428153 BCS1LQ9Y276 419 aa23.51■■□□□ 1.35
DDR1-235ENST00000428153 COL3A1P02461 1466 aaPredicted RBP23.5■■□□□ 1.35
DDR1-235ENST00000428153 KCPQ6ZWJ8 1503 aa23.5■■□□□ 1.35
DDR1-235ENST00000428153 CYP19A1P11511 503 aaPredicted RBP23.5■■□□□ 1.35
DDR1-235ENST00000428153 FKBP8Q14318 412 aa23.5■■□□□ 1.35
DDR1-235ENST00000428153 DNAJC10Q8IXB1 793 aa23.5■■□□□ 1.35
DDR1-235ENST00000428153 SOS1Q07889 1333 aaPredicted RBP23.5■■□□□ 1.35
DDR1-235ENST00000428153 DPEP1P16444 411 aa23.49■■□□□ 1.35
DDR1-235ENST00000428153 SRP68Q9UHB9 627 aaKnown RBP23.49■■□□□ 1.35
DDR1-235ENST00000428153 ZPR1O75312 459 aa23.48■■□□□ 1.35
DDR1-235ENST00000428153 KCNA3P22001 575 aa23.48■■□□□ 1.35
DDR1-235ENST00000428153 TM4SF1P30408 202 aa23.48■■□□□ 1.35
DDR1-235ENST00000428153 ARFGEF1Q9Y6D6 1849 aa23.47■■□□□ 1.35
DDR1-235ENST00000428153 UBR2Q8IWV8 1755 aa23.47■■□□□ 1.35
DDR1-235ENST00000428153 FCHSD2O94868 740 aa23.46■■□□□ 1.35
DDR1-235ENST00000428153 DDR1Q08345 913 aa23.46■■□□□ 1.35
DDR1-235ENST00000428153 SLC39A6Q13433 755 aa23.46■■□□□ 1.35
DDR1-235ENST00000428153 GAS2L2Q8NHY3 880 aa23.46■■□□□ 1.35
DDR1-235ENST00000428153 PIM2Q9P1W9 311 aa23.46■■□□□ 1.35
DDR1-235ENST00000428153 POLRMTO00411 1230 aaKnown RBP23.45■■□□□ 1.34
DDR1-235ENST00000428153 NARFQ9UHQ1 456 aa23.45■■□□□ 1.34
DDR1-235ENST00000428153 COL15A1P39059 1388 aa23.44■■□□□ 1.34
DDR1-235ENST00000428153 ZNF526Q8TF50 670 aaPredicted RBP23.44■■□□□ 1.34
DDR1-235ENST00000428153 USPL1Q5W0Q7 1092 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms