RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 NEK4P51957 841 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 OGFOD1Q8N543 542 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 ACBD3Q9H3P7 528 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 HLA-DOAP06340 250 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 PPP1R12BO60237 982 aaPredicted RBP11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 SMC2O95347 1197 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 LDHCP07864 332 aa11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
CLTCL1-202ENST00000427926 GSE1Q14687 1217 aa11.71□□□□□ -0.54
CLTCL1-202ENST00000427926 DACH1Q9UI36 760 aa11.71□□□□□ -0.54
CLTCL1-202ENST00000427926 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.54
CLTCL1-202ENST00000427926 PDIA4P13667 645 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-202ENST00000427926 ZRSR2Q15696 482 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-202ENST00000427926 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
CLTCL1-202ENST00000427926 CCDC181Q5TID7 509 aa11.7□□□□□ -0.54
CLTCL1-202ENST00000427926 IFT57Q9NWB7 429 aa11.7□□□□□ -0.54
CLTCL1-202ENST00000427926 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
CLTCL1-202ENST00000427926 SSR1P43307 286 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 MCM2P49736 904 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 CHRNA2Q15822 529 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 IFNL2Q8IZJ0 200 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 NAPBQ9H115 298 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 PCF11O94913 1555 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 FCHSD2O94868 740 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 TXLNBQ8N3L3 684 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 MAP3K1Q13233 1512 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 ANKRD62A6NC57 917 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 NOM1Q5C9Z4 860 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
CLTCL1-202ENST00000427926 ERLIN2O94905 339 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 ZBTB3Q9H5J0 574 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 ADGRL1O94910 1474 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 BAG3O95817 575 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 CTCFLQ8NI51 663 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 MAP3K9P80192 1104 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 DDB1Q16531 1140 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 CCDC150Q8NCX0 1101 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 SMARCC1Q92922 1105 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 RANBP6O60518 1105 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 LIG1P18858 919 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 ME1P48163 572 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 SEPT7Q16181 437 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
CLTCL1-202ENST00000427926 TAF7Q15545 349 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 SETDB2Q96T68 719 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 MIS18AQ9NYP9 233 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 NPHP3Q7Z494 1330 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 PLB1Q6P1J6 1458 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 KRT32Q14532 448 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 SKIDA1Q1XH10 827 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 IQCA1Q86XH1 822 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 BCAR3O75815 825 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 HSP90B2PQ58FF3 399 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 ARGLU1Q9NWB6 273 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 WDR62O43379 1518 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 IL1RAPL2Q9NP60 686 aa11.67□□□□□ -0.54
CLTCL1-202ENST00000427926 MCM10Q7L590 875 aa11.66□□□□□ -0.54
CLTCL1-202ENST00000427926 CEP57L1Q8IYX8 460 aa11.66□□□□□ -0.54
CLTCL1-202ENST00000427926 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
CLTCL1-202ENST00000427926 DUSP27Q5VZP5 1158 aa11.66□□□□□ -0.54
CLTCL1-202ENST00000427926 AEBP1Q8IUX7 1158 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 DENND4BO75064 1496 aaPredicted RBP11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 SERPINC1P01008 464 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 CWC27Q6UX04 472 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 CCDC141Q6ZP82 1450 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 PPFIBP1Q86W92 1011 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 UBA5Q9GZZ9 404 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 RAB34Q9BZG1 259 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 CEP131Q9UPN4 1083 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 FIBPO43427 364 aa11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-202ENST00000427926 WASLO00401 505 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 TRIM5Q9C035 493 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 HYPKQ9NX55 129 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 NAIPQ13075 1403 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 CT47B1P0C2W7 299 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 NME9Q86XW9 330 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 LETM1O95202 739 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 CETN2P41208 172 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 GSTO1P78417 241 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 TMEM266Q2M3C6 531 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 TEX35Q5T0J7 233 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 TRMT1LQ7Z2T5 733 aaKnown RBP11.64□□□□□ -0.55
CLTCL1-202ENST00000427926 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms