RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 AMIGO3Q86WK7 504 aa26.49■■□□□ 1.83
PPP1CB-206ENST00000427786 ITPK1Q13572 414 aa26.48■■□□□ 1.83
PPP1CB-206ENST00000427786 CNGB1Q14028 1251 aaPredicted RBP26.48■■□□□ 1.83
PPP1CB-206ENST00000427786 C1orf141Q5JVX7 400 aa26.48■■□□□ 1.83
PPP1CB-206ENST00000427786 LINC00116Q8NCU8 138 aa26.48■■□□□ 1.83
PPP1CB-206ENST00000427786 ARXQ96QS3 562 aa26.47■■□□□ 1.83
PPP1CB-206ENST00000427786 FHDC1Q9C0D6 1143 aaPredicted RBP26.47■■□□□ 1.83
PPP1CB-206ENST00000427786 SLC4A9Q96Q91 983 aa26.46■■□□□ 1.83
PPP1CB-206ENST00000427786 TJP1Q07157 1748 aa26.45■■□□□ 1.83
PPP1CB-206ENST00000427786 AKAP4Q5JQC9 854 aa26.45■■□□□ 1.82
PPP1CB-206ENST00000427786 SYT17Q9BSW7 474 aa26.44■■□□□ 1.82
PPP1CB-206ENST00000427786 CABP4P57796 275 aa26.43■■□□□ 1.82
PPP1CB-206ENST00000427786 ATP6V1AP38606 617 aa26.42■■□□□ 1.82
PPP1CB-206ENST00000427786 MTHFSDQ2M296 383 aaKnown RBP26.42■■□□□ 1.82
PPP1CB-206ENST00000427786 FLAD1Q8NFF5 587 aa26.42■■□□□ 1.82
PPP1CB-206ENST00000427786 AK7Q96M32 723 aa26.42■■□□□ 1.82
PPP1CB-206ENST00000427786 PPP2R1AP30153 589 aa26.41■■□□□ 1.82
PPP1CB-206ENST00000427786 MYH14Q7Z406 1995 aaKnown RBP26.4■■□□□ 1.82
PPP1CB-206ENST00000427786 SIPA1L3O60292 1781 aaPredicted RBP26.39■■□□□ 1.82
PPP1CB-206ENST00000427786 UBR2Q8IWV8 1755 aa26.39■■□□□ 1.82
PPP1CB-206ENST00000427786 SSFA2P28290 1259 aa26.39■■□□□ 1.82
PPP1CB-206ENST00000427786 POLD1P28340 1107 aa26.39■■□□□ 1.82
PPP1CB-206ENST00000427786 NFATC2IPQ8NCF5 419 aa26.39■■□□□ 1.82
PPP1CB-206ENST00000427786 UTRNP46939 3433 aa26.38■■□□□ 1.81
PPP1CB-206ENST00000427786 SMIM5Q71RC9 77 aa26.38■■□□□ 1.81
PPP1CB-206ENST00000427786 LGR6Q9HBX8 967 aa26.38■■□□□ 1.81
PPP1CB-206ENST00000427786 C4AP0C0L4 1744 aa26.37■■□□□ 1.81
PPP1CB-206ENST00000427786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.37■■□□□ 1.81
PPP1CB-206ENST00000427786 U2SURPO15042 1029 aaKnown RBP26.37■■□□□ 1.81
PPP1CB-206ENST00000427786 RNMTO43148 476 aaKnown RBP26.37■■□□□ 1.81
PPP1CB-206ENST00000427786 SLC52A2Q9HAB3 445 aa26.37■■□□□ 1.81
PPP1CB-206ENST00000427786 KCPQ6ZWJ8 1503 aa26.37■■□□□ 1.81
PPP1CB-206ENST00000427786 MSH5O43196 834 aa26.36■■□□□ 1.81
PPP1CB-206ENST00000427786 MSL1Q68DK7 614 aa26.36■■□□□ 1.81
PPP1CB-206ENST00000427786 CNTNAP4Q9C0A0 1308 aa26.36■■□□□ 1.81
PPP1CB-206ENST00000427786 CFAP53Q96M91 514 aa26.35■■□□□ 1.81
PPP1CB-206ENST00000427786 GNPATO15228 680 aa26.34■■□□□ 1.81
PPP1CB-206ENST00000427786 PHF14O94880 888 aa26.34■■□□□ 1.81
PPP1CB-206ENST00000427786 RBM42Q9BTD8 480 aaKnown RBP26.34■■□□□ 1.81
PPP1CB-206ENST00000427786 RSPH6AQ9H0K4 717 aa26.34■■□□□ 1.81
PPP1CB-206ENST00000427786 GOLGB1Q14789 3259 aaKnown RBP26.34■■□□□ 1.81
PPP1CB-206ENST00000427786 RC3H1Q5TC82 1133 aaKnown RBP26.32■■□□□ 1.8
PPP1CB-206ENST00000427786 PTCD1O75127 700 aaKnown RBP26.3■■□□□ 1.8
PPP1CB-206ENST00000427786 GAS2L2Q8NHY3 880 aa26.29■■□□□ 1.8
PPP1CB-206ENST00000427786 PRKAR2BP31323 418 aa26.28■■□□□ 1.8
PPP1CB-206ENST00000427786 PHACTR3Q96KR7 559 aa26.28■■□□□ 1.8
PPP1CB-206ENST00000427786 NLGN2Q8NFZ4 835 aa26.27■■□□□ 1.8
PPP1CB-206ENST00000427786 CEMIPQ8WUJ3 1361 aa26.27■■□□□ 1.8
PPP1CB-206ENST00000427786 NUDCQ9Y266 331 aa26.26■■□□□ 1.79
PPP1CB-206ENST00000427786 RTCBQ9Y3I0 505 aaKnown RBP26.26■■□□□ 1.79
PPP1CB-206ENST00000427786 RPS6KA4O75676 772 aa26.25■■□□□ 1.79
PPP1CB-206ENST00000427786 ADRA2BP18089 450 aa26.25■■□□□ 1.79
PPP1CB-206ENST00000427786 IL17REQ8NFR9 667 aa26.25■■□□□ 1.79
PPP1CB-206ENST00000427786 KIF13BQ9NQT8 1826 aa26.24■■□□□ 1.79
PPP1CB-206ENST00000427786 DCAF8L1A6NGE4 600 aa26.24■■□□□ 1.79
PPP1CB-206ENST00000427786 GNAT3A8MTJ3 354 aa26.24■■□□□ 1.79
PPP1CB-206ENST00000427786 CRKLP46109 303 aaKnown RBP26.24■■□□□ 1.79
PPP1CB-206ENST00000427786 SLC39A6Q13433 755 aa26.24■■□□□ 1.79
PPP1CB-206ENST00000427786 U2AF1L5P0DN76 240 aaPredicted RBP26.23■■□□□ 1.79
PPP1CB-206ENST00000427786 U2AF1Q01081 240 aaKnown RBP eCLIP26.23■■□□□ 1.79
PPP1CB-206ENST00000427786 KLHL34Q8N239 644 aa26.23■■□□□ 1.79
PPP1CB-206ENST00000427786 CHD4Q14839 1912 aa26.23■■□□□ 1.79
PPP1CB-206ENST00000427786 ARHGEF1Q92888 912 aaKnown RBP26.22■■□□□ 1.79
PPP1CB-206ENST00000427786 KIAA1551Q9HCM1 1747 aa26.22■■□□□ 1.79
PPP1CB-206ENST00000427786 FCHSD2O94868 740 aa26.21■■□□□ 1.79
PPP1CB-206ENST00000427786 TRAPPC3LQ5T215 181 aa26.21■■□□□ 1.79
PPP1CB-206ENST00000427786 INTS5Q6P9B9 1019 aaKnown RBP26.21■■□□□ 1.79
PPP1CB-206ENST00000427786 DNAJC10Q8IXB1 793 aa26.21■■□□□ 1.79
PPP1CB-206ENST00000427786 CD2APQ9Y5K6 639 aa26.2■■□□□ 1.78
PPP1CB-206ENST00000427786 DLG5Q8TDM6 1919 aa26.19■■□□□ 1.78
PPP1CB-206ENST00000427786 CYP19A1P11511 503 aaPredicted RBP26.18■■□□□ 1.78
PPP1CB-206ENST00000427786 YY1P25490 414 aa26.18■■□□□ 1.78
PPP1CB-206ENST00000427786 VSIG10Q8N0Z9 540 aa26.18■■□□□ 1.78
PPP1CB-206ENST00000427786 GYS1P13807 737 aa26.17■■□□□ 1.78
PPP1CB-206ENST00000427786 TEFQ10587 303 aa26.16■■□□□ 1.78
PPP1CB-206ENST00000427786 SOS1Q07889 1333 aaPredicted RBP26.15■■□□□ 1.78
PPP1CB-206ENST00000427786 MMP10P09238 476 aa26.15■■□□□ 1.78
PPP1CB-206ENST00000427786 CCDC87Q9NVE4 849 aa26.15■■□□□ 1.78
PPP1CB-206ENST00000427786 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.78
PPP1CB-206ENST00000427786 C10orf71Q711Q0 1435 aa26.14■■□□□ 1.78
PPP1CB-206ENST00000427786 DDX10Q13206 875 aaKnown RBP26.14■■□□□ 1.78
PPP1CB-206ENST00000427786 ZNF790Q6PG37 636 aa26.14■■□□□ 1.78
PPP1CB-206ENST00000427786 HEG1Q9ULI3 1381 aa26.13■■□□□ 1.77
PPP1CB-206ENST00000427786 RFC4P35249 363 aa26.13■■□□□ 1.77
PPP1CB-206ENST00000427786 RALBP1Q15311 655 aa26.13■■□□□ 1.77
PPP1CB-206ENST00000427786 NLGN1Q8N2Q7 840 aa26.13■■□□□ 1.77
PPP1CB-206ENST00000427786 YBX3P16989 372 aaKnown RBP eCLIP26.12■■□□□ 1.77
PPP1CB-206ENST00000427786 ZNF496Q96IT1 587 aaPredicted RBP26.12■■□□□ 1.77
PPP1CB-206ENST00000427786 PLEKHF1Q96S99 279 aa26.12■■□□□ 1.77
PPP1CB-206ENST00000427786 GPR162Q16538 588 aa26.11■■□□□ 1.77
PPP1CB-206ENST00000427786 TTC5Q8N0Z6 440 aa26.11■■□□□ 1.77
PPP1CB-206ENST00000427786 SRP68Q9UHB9 627 aaKnown RBP26.11■■□□□ 1.77
PPP1CB-206ENST00000427786 ZBTB1Q9Y2K1 713 aa26.11■■□□□ 1.77
PPP1CB-206ENST00000427786 PXDNLA1KZ92 1463 aa26.1■■□□□ 1.77
PPP1CB-206ENST00000427786 SCN7AQ01118 1682 aa26.09■■□□□ 1.77
PPP1CB-206ENST00000427786 COL15A1P39059 1388 aa26.09■■□□□ 1.77
PPP1CB-206ENST00000427786 BRCA1P38398 1863 aaKnown RBP26.08■■□□□ 1.77
PPP1CB-206ENST00000427786 KDM3BQ7LBC6 1761 aa26.08■■□□□ 1.77
PPP1CB-206ENST00000427786 N4BP2Q86UW6 1770 aaPredicted RBP26.08■■□□□ 1.77
PPP1CB-206ENST00000427786 HTATSF1O43719 755 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms