RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 GTF2F1P35269 517 aaKnown RBP eCLIP14.68□□□□□ -0.065e-9■■■■■ 29.4
HDLBP-214ENST00000427183 STAMBPO95630 424 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 BLOC1S2Q6QNY1 142 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 CHMP4BP1P59074 171 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 GNL3LQ9NVN8 582 aaKnown RBP14.67□□□□□ -0.06
HDLBP-214ENST00000427183 ZNF397Q8NF99 534 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-214ENST00000427183 ZHX1Q9UKY1 873 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-214ENST00000427183 KIF4BQ2VIQ3 1234 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 GCC1Q96CN9 775 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 NLRP6P59044 892 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 FERMT3Q86UX7 667 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 LUZP1Q86V48 1076 aa14.67□□□□□ -0.06
HDLBP-214ENST00000427183 TRMT1Q9NXH9 659 aaKnown RBP14.67□□□□□ -0.06
HDLBP-214ENST00000427183 NUP153P49790 1475 aaKnown RBP14.66□□□□□ -0.06
HDLBP-214ENST00000427183 SPA17Q15506 151 aa14.66□□□□□ -0.06
HDLBP-214ENST00000427183 PRKCSHP14314 528 aaPredicted RBP14.66□□□□□ -0.06
HDLBP-214ENST00000427183 AAMPQ13685 434 aa14.66□□□□□ -0.06
HDLBP-214ENST00000427183 SRRTQ9BXP5 876 aaKnown RBP14.66□□□□□ -0.06
HDLBP-214ENST00000427183 ZSCAN29Q8IWY8 852 aaPredicted RBP14.66□□□□□ -0.06
HDLBP-214ENST00000427183 MYL6BP14649 208 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 TDO2P48775 406 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 XPCQ01831 940 aaPredicted RBP14.65□□□□□ -0.06
HDLBP-214ENST00000427183 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 MAP3K11Q16584 847 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 MCM4P33991 863 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 CPLX3Q8WVH0 158 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 RPRD2Q5VT52 1461 aaKnown RBP14.65□□□□□ -0.06
HDLBP-214ENST00000427183 GBP3Q9H0R5 595 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 AACSQ86V21 672 aa14.65□□□□□ -0.06
HDLBP-214ENST00000427183 TTC16Q8NEE8 873 aa14.64□□□□□ -0.07
HDLBP-214ENST00000427183 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
HDLBP-214ENST00000427183 KIF14Q15058 1648 aa14.64□□□□□ -0.07
HDLBP-214ENST00000427183 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
HDLBP-214ENST00000427183 SFPQP23246 707 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDLBP-214ENST00000427183 UBA5Q9GZZ9 404 aa14.64□□□□□ -0.07
HDLBP-214ENST00000427183 KIF5CO60282 957 aa14.64□□□□□ -0.07
HDLBP-214ENST00000427183 SPECC1Q5M775 1068 aa14.64□□□□□ -0.07
HDLBP-214ENST00000427183 ZSCAN30Q86W11 494 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 IL1RAPL2Q9NP60 686 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 ITSN2Q9NZM3 1697 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 ATP2C2O75185 946 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 CACNA2D4Q7Z3S7 1137 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 CETN2P41208 172 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 SMC1AQ14683 1233 aaKnown RBP14.63□□□□□ -0.07
HDLBP-214ENST00000427183 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
HDLBP-214ENST00000427183 MAP9Q49MG5 647 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 CCDC85AQ96PX6 553 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-214ENST00000427183 FAM107BQ9H098 131 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 POTEJP0CG39 1038 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 ATF3P18847 181 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 IMMTQ16891 758 aaKnown RBP14.62□□□□□ -0.07
HDLBP-214ENST00000427183 HDGFL1Q5TGJ6 251 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 NCOA1Q15788 1441 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 CDKL5O76039 1030 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 CASTP20810 708 aaKnown RBP14.62□□□□□ -0.07
HDLBP-214ENST00000427183 KIF18AQ8NI77 898 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDLBP-214ENST00000427183 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
HDLBP-214ENST00000427183 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
HDLBP-214ENST00000427183 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
HDLBP-214ENST00000427183 CCDC175P0C221 793 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 HLTFQ14527 1009 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDLBP-214ENST00000427183 TMCO5BA8MYB1 307 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 CCDC83Q8IWF9 413 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 C16orf45Q96MC5 204 aaPredicted RBP14.61□□□□□ -0.07
HDLBP-214ENST00000427183 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 BACH2Q9BYV9 841 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 GCC2Q8IWJ2 1684 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 C11orf95C9JLR9 678 aaPredicted RBP14.61□□□□□ -0.07
HDLBP-214ENST00000427183 ZSCAN12O43309 604 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 PPM1EQ8WY54 764 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
HDLBP-214ENST00000427183 GUCY1B3Q02153 619 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 COMMD10Q9Y6G5 202 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 GCOM1H8Y6P7 765 aaPredicted RBP14.6□□□□□ -0.07
HDLBP-214ENST00000427183 MYZAPP0CAP1 466 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
HDLBP-214ENST00000427183 CHD1LQ86WJ1 897 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 GPATCH8Q9UKJ3 1502 aaKnown RBP14.6□□□□□ -0.07
HDLBP-214ENST00000427183 EIF4G3O43432 1585 aaKnown RBP14.6□□□□□ -0.07
HDLBP-214ENST00000427183 HOOK3Q86VS8 718 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 CALCOCO1Q9P1Z2 691 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
HDLBP-214ENST00000427183 GAS2L2Q8NHY3 880 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 DISP1Q96F81 1524 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 SMARCC1Q92922 1105 aaPredicted RBP14.59□□□□□ -0.07
HDLBP-214ENST00000427183 TDRD12Q587J7 1177 aaKnown RBP14.59□□□□□ -0.07
HDLBP-214ENST00000427183 FKBP15Q5T1M5 1219 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 MICALCLQ6ZW33 695 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
HDLBP-214ENST00000427183 LMAN1P49257 510 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 PPP4R3BQ5MIZ7 849 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
HDLBP-214ENST00000427183 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 DRC1Q96MC2 740 aa14.59□□□□□ -0.07
HDLBP-214ENST00000427183 PPP1R12BO60237 982 aaPredicted RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms