RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 MRC1P22897 1456 aa20.32■□□□□ 0.84
PHF1-203ENST00000427004 NEFMP07197 916 aa20.32■□□□□ 0.84
PHF1-203ENST00000427004 TMOD3Q9NYL9 352 aa20.32■□□□□ 0.84
PHF1-203ENST00000427004 PLEKHG2Q9H7P9 1386 aa20.32■□□□□ 0.84
PHF1-203ENST00000427004 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
PHF1-203ENST00000427004 LY75O60449 1722 aa20.31■□□□□ 0.84
PHF1-203ENST00000427004 SLC52A2Q9HAB3 445 aa20.31■□□□□ 0.84
PHF1-203ENST00000427004 RREB1Q92766 1687 aa20.3■□□□□ 0.84
PHF1-203ENST00000427004 HSP90AB1P08238 724 aaKnown RBP20.3■□□□□ 0.84
PHF1-203ENST00000427004 PROM2Q8N271 834 aa20.3■□□□□ 0.84
PHF1-203ENST00000427004 NUP188Q5SRE5 1749 aa20.3■□□□□ 0.84
PHF1-203ENST00000427004 SF3B2Q13435 895 aaKnown RBP20.29■□□□□ 0.84
PHF1-203ENST00000427004 PNNQ9H307 717 aaKnown RBP20.29■□□□□ 0.84
PHF1-203ENST00000427004 ATG3Q9NT62 314 aa20.29■□□□□ 0.84
PHF1-203ENST00000427004 CEMIPQ8WUJ3 1361 aa20.29■□□□□ 0.84
PHF1-203ENST00000427004 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
PHF1-203ENST00000427004 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
PHF1-203ENST00000427004 CAMKK2Q96RR4 588 aa20.28■□□□□ 0.84
PHF1-203ENST00000427004 PALLDQ8WX93 1383 aa20.27■□□□□ 0.84
PHF1-203ENST00000427004 SLC4A9Q96Q91 983 aa20.27■□□□□ 0.84
PHF1-203ENST00000427004 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
PHF1-203ENST00000427004 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
PHF1-203ENST00000427004 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
PHF1-203ENST00000427004 BAG6P46379 1132 aa20.26■□□□□ 0.83
PHF1-203ENST00000427004 TEFQ10587 303 aa20.26■□□□□ 0.83
PHF1-203ENST00000427004 TAF1LQ8IZX4 1826 aa20.25■□□□□ 0.83
PHF1-203ENST00000427004 SMIM5Q71RC9 77 aa20.25■□□□□ 0.83
PHF1-203ENST00000427004 RBM42Q9BTD8 480 aaKnown RBP20.25■□□□□ 0.83
PHF1-203ENST00000427004 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
PHF1-203ENST00000427004 UBR2Q8IWV8 1755 aa20.25■□□□□ 0.83
PHF1-203ENST00000427004 TJP1Q07157 1748 aa20.24■□□□□ 0.83
PHF1-203ENST00000427004 KCPQ6ZWJ8 1503 aa20.24■□□□□ 0.83
PHF1-203ENST00000427004 C5P01031 1676 aa20.24■□□□□ 0.83
PHF1-203ENST00000427004 TXNRD1Q16881 649 aa20.24■□□□□ 0.83
PHF1-203ENST00000427004 RGPD3A6NKT7 1758 aaPredicted RBP20.23■□□□□ 0.83
PHF1-203ENST00000427004 RGPD4Q7Z3J3 1758 aa20.23■□□□□ 0.83
PHF1-203ENST00000427004 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
PHF1-203ENST00000427004 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
PHF1-203ENST00000427004 BTBD11A6QL63 1104 aa20.21■□□□□ 0.83
PHF1-203ENST00000427004 ITPK1Q13572 414 aa20.21■□□□□ 0.83
PHF1-203ENST00000427004 ANO8Q9HCE9 1232 aaPredicted RBP20.21■□□□□ 0.83
PHF1-203ENST00000427004 HTATSF1O43719 755 aaKnown RBP20.2■□□□□ 0.82
PHF1-203ENST00000427004 KRT24Q2M2I5 525 aa20.2■□□□□ 0.82
PHF1-203ENST00000427004 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
PHF1-203ENST00000427004 CCNL1Q9UK58 526 aaPredicted RBP20.2■□□□□ 0.82
PHF1-203ENST00000427004 PLSCR1O15162 318 aa20.19■□□□□ 0.82
PHF1-203ENST00000427004 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
PHF1-203ENST00000427004 ZNF496Q96IT1 587 aaPredicted RBP20.19■□□□□ 0.82
PHF1-203ENST00000427004 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
PHF1-203ENST00000427004 TAF7Q15545 349 aaPredicted RBP20.18■□□□□ 0.82
PHF1-203ENST00000427004 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
PHF1-203ENST00000427004 LINC00116Q8NCU8 138 aa20.18■□□□□ 0.82
PHF1-203ENST00000427004 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
PHF1-203ENST00000427004 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
PHF1-203ENST00000427004 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
PHF1-203ENST00000427004 SIK1P57059 783 aa20.17■□□□□ 0.82
PHF1-203ENST00000427004 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
PHF1-203ENST00000427004 PSDA5PKW4 1024 aaPredicted RBP20.16■□□□□ 0.82
PHF1-203ENST00000427004 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
PHF1-203ENST00000427004 AMIGO3Q86WK7 504 aa20.16■□□□□ 0.82
PHF1-203ENST00000427004 DNAJC10Q8IXB1 793 aa20.16■□□□□ 0.82
PHF1-203ENST00000427004 TSR2Q969E8 191 aaKnown RBP20.16■□□□□ 0.82
PHF1-203ENST00000427004 LMOD3Q0VAK6 560 aa20.15■□□□□ 0.82
PHF1-203ENST00000427004 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
PHF1-203ENST00000427004 C4BP0C0L5 1744 aa20.15■□□□□ 0.82
PHF1-203ENST00000427004 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
PHF1-203ENST00000427004 TTC5Q8N0Z6 440 aa20.14■□□□□ 0.81
PHF1-203ENST00000427004 SMARCC1Q92922 1105 aaPredicted RBP20.14■□□□□ 0.81
PHF1-203ENST00000427004 PDGFDQ9GZP0 370 aaPredicted RBP20.14■□□□□ 0.81
PHF1-203ENST00000427004 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
PHF1-203ENST00000427004 MBIPQ9NS73 344 aa20.13■□□□□ 0.81
PHF1-203ENST00000427004 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
PHF1-203ENST00000427004 HEG1Q9ULI3 1381 aa20.11■□□□□ 0.81
PHF1-203ENST00000427004 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
PHF1-203ENST00000427004 R3HDM1Q15032 1099 aaKnown RBP20.11■□□□□ 0.81
PHF1-203ENST00000427004 NECTIN2Q92692 538 aa20.11■□□□□ 0.81
PHF1-203ENST00000427004 UBR3Q6ZT12 1888 aa20.11■□□□□ 0.81
PHF1-203ENST00000427004 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
PHF1-203ENST00000427004 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
PHF1-203ENST00000427004 CHL1O00533 1208 aa20.1■□□□□ 0.81
PHF1-203ENST00000427004 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
PHF1-203ENST00000427004 USP16Q9Y5T5 823 aa20.1■□□□□ 0.81
PHF1-203ENST00000427004 LAMB4A4D0S4 1761 aa20.09■□□□□ 0.81
PHF1-203ENST00000427004 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
PHF1-203ENST00000427004 ZNF831Q5JPB2 1677 aa20.08■□□□□ 0.81
PHF1-203ENST00000427004 CICQ96RK0 1608 aaPredicted RBP20.08■□□□□ 0.8
PHF1-203ENST00000427004 PHF14O94880 888 aa20.07■□□□□ 0.8
PHF1-203ENST00000427004 SLC27A3Q5K4L6 730 aa20.07■□□□□ 0.8
PHF1-203ENST00000427004 AKT1S1Q96B36 256 aa20.07■□□□□ 0.8
PHF1-203ENST00000427004 CFAP44Q96MT7 982 aa20.07■□□□□ 0.8
PHF1-203ENST00000427004 FMNL2Q96PY5 1086 aa20.07■□□□□ 0.8
PHF1-203ENST00000427004 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
PHF1-203ENST00000427004 A1BGP04217 495 aa20.06■□□□□ 0.8
PHF1-203ENST00000427004 TSPYL6Q8N831 410 aa20.06■□□□□ 0.8
PHF1-203ENST00000427004 C8orf58Q8NAV2 365 aa20.06■□□□□ 0.8
PHF1-203ENST00000427004 IFT57Q9NWB7 429 aa20.06■□□□□ 0.8
PHF1-203ENST00000427004 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
PHF1-203ENST00000427004 ANXA1P04083 346 aa20.05■□□□□ 0.8
PHF1-203ENST00000427004 CYP19A1P11511 503 aaPredicted RBP20.05■□□□□ 0.8
PHF1-203ENST00000427004 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms