RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 DISP3Q9P2K9 1392 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 EXOC5O00471 708 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 ZNF76P36508 570 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 IFIT5Q13325 482 aaKnown RBP9.35□□□□□ -0.91
CTNND1-207ENST00000426142 NOL7Q9UMY1 257 aaKnown RBP9.35□□□□□ -0.91
CTNND1-207ENST00000426142 PPP6R1Q9UPN7 881 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 AKAP2Q9Y2D5 859 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 NCOA1Q15788 1441 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 ACEP12821 1306 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 POLR3DP05423 398 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-207ENST00000426142 SYCP1Q15431 976 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 DNAAF4Q8WXU2 420 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 SMARCE1Q969G3 411 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 THOC2Q8NI27 1593 aaKnown RBP9.35□□□□□ -0.91
CTNND1-207ENST00000426142 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
CTNND1-207ENST00000426142 CDKL5O76039 1030 aa9.34□□□□□ -0.91
CTNND1-207ENST00000426142 MAP3K2Q9Y2U5 619 aa9.34□□□□□ -0.91
CTNND1-207ENST00000426142 CCDC83Q8IWF9 413 aa9.34□□□□□ -0.91
CTNND1-207ENST00000426142 A0A087WZG4 1122 aa9.34□□□□□ -0.91
CTNND1-207ENST00000426142 UPF3BQ9BZI7 483 aaKnown RBP9.34□□□□□ -0.91
CTNND1-207ENST00000426142 CCDC192P0DO97 292 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 FERMT3Q86UX7 667 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 DZIP1Q86YF9 867 aaKnown RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 CRACR2BQ8N4Y2 399 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 ANKRD24Q8TF21 1146 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 AK7Q96M32 723 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 NKTRP30414 1462 aaKnown RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 ANXA1P04083 346 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 SETQ01105 290 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 SLC4A8Q2Y0W8 1093 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 ALDH1L2Q3SY69 923 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 RPGRQ92834 1020 aaKnown RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 LARP6Q9BRS8 491 aaKnown RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 ARGLU1Q9NWB6 273 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 TMOD2Q9NZR1 351 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 CCDC173Q0VFZ6 552 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 KRT32Q14532 448 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 PDCL3Q9H2J4 239 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 MKNK2Q9HBH9 465 aa9.33□□□□□ -0.92
CTNND1-207ENST00000426142 SCAF11Q99590 1463 aaKnown RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 GLRX3O76003 335 aaKnown RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 ZSCAN31Q96LW9 406 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 C14orf93Q9H972 538 aaKnown RBP9.33□□□□□ -0.92
CTNND1-207ENST00000426142 FLIIQ13045 1269 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 TEX35Q5T0J7 233 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 HYPKQ9NX55 129 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 MATR3P43243 847 aaKnown RBP eCLIP9.32□□□□□ -0.926e-7■■■■□ 22.1
CTNND1-207ENST00000426142 STIM1Q13586 685 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 CAMK4Q16566 473 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 PAF1Q8N7H5 531 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 NAPBQ9H115 298 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 DBF4Q9UBU7 674 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-207ENST00000426142 ANKRD18BA2A2Z9 1011 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 CHMP4BP1P59074 171 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 FAM177A1Q8N128 213 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-207ENST00000426142 GUCY1B3Q02153 619 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 TSHZ3Q63HK5 1081 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 MBIPQ9NS73 344 aa9.32□□□□□ -0.92
CTNND1-207ENST00000426142 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
CTNND1-207ENST00000426142 SLC5A1P13866 664 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 TRIM27P14373 513 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 DEF6Q9H4E7 631 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 PIP4K2AP48426 406 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-207ENST00000426142 PPFIBP1Q86W92 1011 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 IFNL2Q8IZJ0 200 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 SEPT11Q9NVA2 429 aaKnown RBP9.31□□□□□ -0.92
CTNND1-207ENST00000426142 DHX29Q7Z478 1369 aaKnown RBP9.31□□□□□ -0.92
CTNND1-207ENST00000426142 ACSBG1Q96GR2 724 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 ZNHIT6Q9NWK9 470 aaKnown RBP9.31□□□□□ -0.92
CTNND1-207ENST00000426142 BRPF3Q9ULD4 1205 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 U3KPZ7 1027 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-207ENST00000426142 LRPPRCP42704 1394 aaKnown RBP9.31□□□□□ -0.92
CTNND1-207ENST00000426142 TNRQ92752 1358 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 SNRKQ9NRH2 765 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 ABCC11Q96J66 1382 aa9.31□□□□□ -0.92
CTNND1-207ENST00000426142 DACH1Q9UI36 760 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 DHX8Q14562 1220 aaKnown RBP9.3□□□□□ -0.92
CTNND1-207ENST00000426142 HSP90B2PQ58FF3 399 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 CFAP45Q9UL16 551 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 KDM5BQ9UGL1 1544 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 C6orf229H3BNL8 230 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 MAP3K12Q12852 859 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 CEP57L1Q8IYX8 460 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 SEC63Q9UGP8 760 aaKnown RBP9.3□□□□□ -0.92
CTNND1-207ENST00000426142 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 WASF1Q92558 559 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 TTC21BQ7Z4L5 1316 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 NUP62CLQ9H1M0 184 aa9.3□□□□□ -0.92
CTNND1-207ENST00000426142 PI4KAP2A4QPH2 592 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 UBE3BQ7Z3V4 1068 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 PI4KAP1Q8N8J0 262 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 ACBD3Q9H3P7 528 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 GOLIM4O00461 696 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 PPFIA3O75145 1194 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 PPM1FP49593 454 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-207ENST00000426142 CCDC96Q2M329 555 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 NOM1Q5C9Z4 860 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms