RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 SPG7Q9UQ90 795 aa18.94■□□□□ 0.62
VEGFB-202ENST00000426086 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
VEGFB-202ENST00000426086 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
VEGFB-202ENST00000426086 PHKG2P15735 406 aa18.93■□□□□ 0.62
VEGFB-202ENST00000426086 DNAJC5GQ8N7S2 189 aa18.93■□□□□ 0.62
VEGFB-202ENST00000426086 NMRK2Q9NPI5 230 aa18.92■□□□□ 0.62
VEGFB-202ENST00000426086 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
VEGFB-202ENST00000426086 KDRP35968 1356 aa18.92■□□□□ 0.62
VEGFB-202ENST00000426086 WASHC2AQ641Q2 1341 aa18.91■□□□□ 0.62
VEGFB-202ENST00000426086 C10orf71Q711Q0 1435 aa18.91■□□□□ 0.62
VEGFB-202ENST00000426086 TOMM70O94826 608 aa18.89■□□□□ 0.61
VEGFB-202ENST00000426086 DPEP1P16444 411 aa18.89■□□□□ 0.61
VEGFB-202ENST00000426086 APLP1P51693 650 aa18.89■□□□□ 0.61
VEGFB-202ENST00000426086 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
VEGFB-202ENST00000426086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.89■□□□□ 0.61
VEGFB-202ENST00000426086 TGFB2P61812 414 aa18.88■□□□□ 0.61
VEGFB-202ENST00000426086 ARHGAP27Q6ZUM4 889 aa18.88■□□□□ 0.61
VEGFB-202ENST00000426086 ARHGEF1Q92888 912 aaKnown RBP18.88■□□□□ 0.61
VEGFB-202ENST00000426086 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
VEGFB-202ENST00000426086 BRCA1P38398 1863 aaKnown RBP18.88■□□□□ 0.61
VEGFB-202ENST00000426086 C4AP0C0L4 1744 aa18.87■□□□□ 0.61
VEGFB-202ENST00000426086 KCNA3P22001 575 aa18.87■□□□□ 0.61
VEGFB-202ENST00000426086 TRAPPC3LQ5T215 181 aa18.87■□□□□ 0.61
VEGFB-202ENST00000426086 RTCBQ9Y3I0 505 aaKnown RBP18.87■□□□□ 0.61
VEGFB-202ENST00000426086 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
VEGFB-202ENST00000426086 GYS1P13807 737 aa18.86■□□□□ 0.61
VEGFB-202ENST00000426086 HTRA3P83110 453 aa18.86■□□□□ 0.61
VEGFB-202ENST00000426086 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
VEGFB-202ENST00000426086 NLGN1Q8N2Q7 840 aa18.85■□□□□ 0.61
VEGFB-202ENST00000426086 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
VEGFB-202ENST00000426086 MYH14Q7Z406 1995 aaKnown RBP18.84■□□□□ 0.61
VEGFB-202ENST00000426086 WDR90Q96KV7 1748 aa18.84■□□□□ 0.61
VEGFB-202ENST00000426086 FCHSD2O94868 740 aa18.84■□□□□ 0.61
VEGFB-202ENST00000426086 ZNF831Q5JPB2 1677 aa18.84■□□□□ 0.61
VEGFB-202ENST00000426086 KDM6AO15550 1401 aaPredicted RBP18.83■□□□□ 0.6
VEGFB-202ENST00000426086 CNTNAP4Q9C0A0 1308 aa18.82■□□□□ 0.6
VEGFB-202ENST00000426086 RPS6KA4O75676 772 aa18.82■□□□□ 0.6
VEGFB-202ENST00000426086 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
VEGFB-202ENST00000426086 RC3H1Q5TC82 1133 aaKnown RBP18.82■□□□□ 0.6
VEGFB-202ENST00000426086 C9orf131Q5VYM1 1079 aa18.82■□□□□ 0.6
VEGFB-202ENST00000426086 CCDC87Q9NVE4 849 aa18.82■□□□□ 0.6
VEGFB-202ENST00000426086 TNNT2P45379 298 aaPredicted RBP18.81■□□□□ 0.6
VEGFB-202ENST00000426086 KCPQ6ZWJ8 1503 aa18.8■□□□□ 0.6
VEGFB-202ENST00000426086 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
VEGFB-202ENST00000426086 ADRA2BP18089 450 aa18.8■□□□□ 0.6
VEGFB-202ENST00000426086 RFC4P35249 363 aa18.8■□□□□ 0.6
VEGFB-202ENST00000426086 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
VEGFB-202ENST00000426086 PARP3Q9Y6F1 533 aa18.8■□□□□ 0.6
VEGFB-202ENST00000426086 ERVV-2B6SEH9 535 aa18.79■□□□□ 0.6
VEGFB-202ENST00000426086 DDR1Q08345 913 aa18.79■□□□□ 0.6
VEGFB-202ENST00000426086 RBM46Q8TBY0 533 aaKnown RBP18.79■□□□□ 0.6
VEGFB-202ENST00000426086 FKBP8Q14318 412 aa18.78■□□□□ 0.6
VEGFB-202ENST00000426086 CHRNA5P30532 468 aa18.77■□□□□ 0.6
VEGFB-202ENST00000426086 COL13A1Q5TAT6 717 aaPredicted RBP18.77■□□□□ 0.6
VEGFB-202ENST00000426086 DCAF5Q96JK2 942 aa18.77■□□□□ 0.6
VEGFB-202ENST00000426086 PTCD1O75127 700 aaKnown RBP18.76■□□□□ 0.59
VEGFB-202ENST00000426086 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
VEGFB-202ENST00000426086 KLRG1Q96E93 195 aa18.76■□□□□ 0.59
VEGFB-202ENST00000426086 PIM2Q9P1W9 311 aa18.76■□□□□ 0.59
VEGFB-202ENST00000426086 TJP1Q07157 1748 aa18.76■□□□□ 0.59
VEGFB-202ENST00000426086 ADAMTS7Q9UKP4 1686 aa18.76■□□□□ 0.59
VEGFB-202ENST00000426086 CABP4P57796 275 aa18.75■□□□□ 0.59
VEGFB-202ENST00000426086 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
VEGFB-202ENST00000426086 RNF181Q9P0P0 153 aa18.75■□□□□ 0.59
VEGFB-202ENST00000426086 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
VEGFB-202ENST00000426086 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
VEGFB-202ENST00000426086 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
VEGFB-202ENST00000426086 JMYQ8N9B5 988 aa18.74■□□□□ 0.59
VEGFB-202ENST00000426086 RRAGCQ9HB90 399 aa18.74■□□□□ 0.59
VEGFB-202ENST00000426086 SBF1O95248 1867 aa18.73■□□□□ 0.59
VEGFB-202ENST00000426086 PLEKHO1Q53GL0 409 aaPredicted RBP18.73■□□□□ 0.59
VEGFB-202ENST00000426086 DALRD3Q5D0E6 543 aaKnown RBP18.73■□□□□ 0.59
VEGFB-202ENST00000426086 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
VEGFB-202ENST00000426086 C16orf71Q8IYS4 520 aaPredicted RBP18.72■□□□□ 0.59
VEGFB-202ENST00000426086 NFATC2IPQ8NCF5 419 aa18.72■□□□□ 0.59
VEGFB-202ENST00000426086 POLRMTO00411 1230 aaKnown RBP18.71■□□□□ 0.59
VEGFB-202ENST00000426086 PRELPP51888 382 aa18.71■□□□□ 0.59
VEGFB-202ENST00000426086 FSTL1Q12841 308 aa18.71■□□□□ 0.59
VEGFB-202ENST00000426086 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
VEGFB-202ENST00000426086 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
VEGFB-202ENST00000426086 TM4SF1P30408 202 aa18.7■□□□□ 0.58
VEGFB-202ENST00000426086 MTHFSP49914 203 aa18.7■□□□□ 0.58
VEGFB-202ENST00000426086 RASSF7Q02833 373 aa18.7■□□□□ 0.58
VEGFB-202ENST00000426086 KDM2BQ8NHM5 1336 aa18.7■□□□□ 0.58
VEGFB-202ENST00000426086 TNRC6CQ9HCJ0 1690 aaKnown RBP18.69■□□□□ 0.58
VEGFB-202ENST00000426086 CAPN15O75808 1086 aa18.68■□□□□ 0.58
VEGFB-202ENST00000426086 AMOTQ4VCS5 1084 aa18.67■□□□□ 0.58
VEGFB-202ENST00000426086 USPL1Q5W0Q7 1092 aa18.67■□□□□ 0.58
VEGFB-202ENST00000426086 DNAJC10Q8IXB1 793 aa18.67■□□□□ 0.58
VEGFB-202ENST00000426086 AFDNP55196 1824 aaKnown RBP18.66■□□□□ 0.58
VEGFB-202ENST00000426086 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
VEGFB-202ENST00000426086 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
VEGFB-202ENST00000426086 NFIXQ14938 502 aa18.64■□□□□ 0.57
VEGFB-202ENST00000426086 SULT6B1Q6IMI4 303 aa18.64■□□□□ 0.57
VEGFB-202ENST00000426086 PANK3Q9H999 370 aa18.64■□□□□ 0.57
VEGFB-202ENST00000426086 SOS1Q07889 1333 aaPredicted RBP18.64■□□□□ 0.57
VEGFB-202ENST00000426086 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
VEGFB-202ENST00000426086 SMC1BQ8NDV3 1235 aa18.63■□□□□ 0.57
VEGFB-202ENST00000426086 BCL2L12Q9HB09 334 aa18.63■□□□□ 0.57
VEGFB-202ENST00000426086 LGR6Q9HBX8 967 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms