RNA–Protein interactions for RNA: ENST00000425841.1

CLHC1-206, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-206ENST00000425841 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
CLHC1-206ENST00000425841 WWC3Q9ULE0 1092 aa11.99□□□□□ -0.49
CLHC1-206ENST00000425841 C4AP0C0L4 1744 aa11.99□□□□□ -0.49
CLHC1-206ENST00000425841 C10orf71Q711Q0 1435 aa11.98□□□□□ -0.49
CLHC1-206ENST00000425841 KDRP35968 1356 aa11.98□□□□□ -0.49
CLHC1-206ENST00000425841 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
CLHC1-206ENST00000425841 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
CLHC1-206ENST00000425841 WDR90Q96KV7 1748 aa11.97□□□□□ -0.49
CLHC1-206ENST00000425841 ITPK1Q13572 414 aa11.97□□□□□ -0.49
CLHC1-206ENST00000425841 PLEKHG2Q9H7P9 1386 aa11.95□□□□□ -0.5
CLHC1-206ENST00000425841 GNPATO15228 680 aa11.95□□□□□ -0.5
CLHC1-206ENST00000425841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLHC1-206ENST00000425841 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
CLHC1-206ENST00000425841 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
CLHC1-206ENST00000425841 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
CLHC1-206ENST00000425841 MYH14Q7Z406 1995 aaKnown RBP11.94□□□□□ -0.5
CLHC1-206ENST00000425841 WASHC2AQ641Q2 1341 aa11.94□□□□□ -0.5
CLHC1-206ENST00000425841 MMP10P09238 476 aa11.94□□□□□ -0.5
CLHC1-206ENST00000425841 APLP1P51693 650 aa11.94□□□□□ -0.5
CLHC1-206ENST00000425841 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 PHKG2P15735 406 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 TGFB2P61812 414 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 EYA1Q99502 592 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 PCNTO95613 3336 aa11.93□□□□□ -0.5
CLHC1-206ENST00000425841 TOMM70O94826 608 aa11.92□□□□□ -0.5
CLHC1-206ENST00000425841 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
CLHC1-206ENST00000425841 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
CLHC1-206ENST00000425841 PANK3Q9H999 370 aa11.92□□□□□ -0.5
CLHC1-206ENST00000425841 ADAMTS7Q9UKP4 1686 aa11.91□□□□□ -0.5
CLHC1-206ENST00000425841 TJP1Q07157 1748 aa11.91□□□□□ -0.5
CLHC1-206ENST00000425841 TNRC6CQ9HCJ0 1690 aaKnown RBP11.91□□□□□ -0.5
CLHC1-206ENST00000425841 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
CLHC1-206ENST00000425841 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
CLHC1-206ENST00000425841 KDM6AO15550 1401 aaPredicted RBP11.9□□□□□ -0.5
CLHC1-206ENST00000425841 SBF1O95248 1867 aa11.9□□□□□ -0.5
CLHC1-206ENST00000425841 ADRA2BP18089 450 aa11.9□□□□□ -0.5
CLHC1-206ENST00000425841 NMRK2Q9NPI5 230 aa11.9□□□□□ -0.5
CLHC1-206ENST00000425841 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
CLHC1-206ENST00000425841 PPM1GO15355 546 aaPredicted RBP11.89□□□□□ -0.51
CLHC1-206ENST00000425841 GYS1P13807 737 aa11.89□□□□□ -0.51
CLHC1-206ENST00000425841 DPEP1P16444 411 aa11.89□□□□□ -0.51
CLHC1-206ENST00000425841 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
CLHC1-206ENST00000425841 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
CLHC1-206ENST00000425841 POLKQ9UBT6 870 aa11.89□□□□□ -0.51
CLHC1-206ENST00000425841 RTCBQ9Y3I0 505 aaKnown RBP11.89□□□□□ -0.51
CLHC1-206ENST00000425841 KCNA3P22001 575 aa11.88□□□□□ -0.51
CLHC1-206ENST00000425841 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
CLHC1-206ENST00000425841 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
CLHC1-206ENST00000425841 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
CLHC1-206ENST00000425841 KCPQ6ZWJ8 1503 aa11.87□□□□□ -0.51
CLHC1-206ENST00000425841 ERVV-2B6SEH9 535 aa11.87□□□□□ -0.51
CLHC1-206ENST00000425841 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
CLHC1-206ENST00000425841 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
CLHC1-206ENST00000425841 RBM46Q8TBY0 533 aaKnown RBP11.87□□□□□ -0.51
CLHC1-206ENST00000425841 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
CLHC1-206ENST00000425841 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
CLHC1-206ENST00000425841 FCHSD2O94868 740 aa11.86□□□□□ -0.51
CLHC1-206ENST00000425841 DCAF5Q96JK2 942 aa11.86□□□□□ -0.51
CLHC1-206ENST00000425841 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
CLHC1-206ENST00000425841 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
CLHC1-206ENST00000425841 C9orf131Q5VYM1 1079 aa11.85□□□□□ -0.51
CLHC1-206ENST00000425841 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
CLHC1-206ENST00000425841 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
CLHC1-206ENST00000425841 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
CLHC1-206ENST00000425841 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
CLHC1-206ENST00000425841 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
CLHC1-206ENST00000425841 RFC4P35249 363 aa11.84□□□□□ -0.51
CLHC1-206ENST00000425841 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
CLHC1-206ENST00000425841 KLRG1Q96E93 195 aa11.84□□□□□ -0.51
CLHC1-206ENST00000425841 USP42Q9H9J4 1324 aaKnown RBP11.84□□□□□ -0.51
CLHC1-206ENST00000425841 TIAM2Q8IVF5 1701 aa11.83□□□□□ -0.52
CLHC1-206ENST00000425841 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
CLHC1-206ENST00000425841 HTRA3P83110 453 aa11.83□□□□□ -0.52
CLHC1-206ENST00000425841 DDR1Q08345 913 aa11.83□□□□□ -0.52
CLHC1-206ENST00000425841 FSTL1Q12841 308 aa11.83□□□□□ -0.52
CLHC1-206ENST00000425841 PIM2Q9P1W9 311 aa11.83□□□□□ -0.52
CLHC1-206ENST00000425841 KNSTRNQ9Y448 316 aa11.83□□□□□ -0.52
CLHC1-206ENST00000425841 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
CLHC1-206ENST00000425841 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
CLHC1-206ENST00000425841 FKBP8Q14318 412 aa11.82□□□□□ -0.52
CLHC1-206ENST00000425841 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
CLHC1-206ENST00000425841 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
CLHC1-206ENST00000425841 DALRD3Q5D0E6 543 aaKnown RBP11.81□□□□□ -0.52
CLHC1-206ENST00000425841 ZNF530Q6P9A1 599 aaPredicted RBP11.81□□□□□ -0.52
CLHC1-206ENST00000425841 RNF181Q9P0P0 153 aa11.81□□□□□ -0.52
CLHC1-206ENST00000425841 SRP68Q9UHB9 627 aaKnown RBP11.81□□□□□ -0.52
CLHC1-206ENST00000425841 MRC1P22897 1456 aa11.81□□□□□ -0.52
CLHC1-206ENST00000425841 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
CLHC1-206ENST00000425841 CABP4P57796 275 aa11.8□□□□□ -0.52
CLHC1-206ENST00000425841 AMOTQ4VCS5 1084 aa11.8□□□□□ -0.52
CLHC1-206ENST00000425841 PLEKHO1Q53GL0 409 aaPredicted RBP11.8□□□□□ -0.52
CLHC1-206ENST00000425841 COL13A1Q5TAT6 717 aaPredicted RBP11.8□□□□□ -0.52
CLHC1-206ENST00000425841 MORC1Q86VD1 984 aa11.8□□□□□ -0.52
CLHC1-206ENST00000425841 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
CLHC1-206ENST00000425841 CCDC88AQ3V6T2 1871 aa11.8□□□□□ -0.52
CLHC1-206ENST00000425841 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
CLHC1-206ENST00000425841 PTCD1O75127 700 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms