RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RGS12O14924 1447 aa19.35■□□□□ 0.69
ACTB-204ENST00000425660 COL14A1Q05707 1796 aaKnown RBP19.35■□□□□ 0.69
ACTB-204ENST00000425660 PHLPP1O60346 1717 aa19.34■□□□□ 0.69
ACTB-204ENST00000425660 VIRMAQ69YN4 1812 aaKnown RBP19.34■□□□□ 0.69
ACTB-204ENST00000425660 BTBD11A6QL63 1104 aa19.34■□□□□ 0.69
ACTB-204ENST00000425660 CYP27B1O15528 508 aa19.34■□□□□ 0.69
ACTB-204ENST00000425660 CCDC30Q5VVM6 783 aa19.33■□□□□ 0.69
ACTB-204ENST00000425660 LARP1Q6PKG0 1096 aaKnown RBP19.33■□□□□ 0.69
ACTB-204ENST00000425660 ZBTB40Q9NUA8 1239 aa19.33■□□□□ 0.69
ACTB-204ENST00000425660 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.69
ACTB-204ENST00000425660 MRC1P22897 1456 aa19.33■□□□□ 0.69
ACTB-204ENST00000425660 SCN11AQ9UI33 1791 aa19.33■□□□□ 0.68
ACTB-204ENST00000425660 HEG1Q9ULI3 1381 aa19.32■□□□□ 0.68
ACTB-204ENST00000425660 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
ACTB-204ENST00000425660 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
ACTB-204ENST00000425660 DCAF5Q96JK2 942 aa19.32■□□□□ 0.68
ACTB-204ENST00000425660 EVA1CP58658 441 aa19.32■□□□□ 0.68
ACTB-204ENST00000425660 IGHDP01880 384 aa19.31■□□□□ 0.68
ACTB-204ENST00000425660 IL2RBP14784 551 aa19.31■□□□□ 0.68
ACTB-204ENST00000425660 CHMP4AQ9BY43 222 aa19.31■□□□□ 0.68
ACTB-204ENST00000425660 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
ACTB-204ENST00000425660 SLC52A2Q9HAB3 445 aa19.31■□□□□ 0.68
ACTB-204ENST00000425660 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
ACTB-204ENST00000425660 HSPA1LP34931 641 aa19.3■□□□□ 0.68
ACTB-204ENST00000425660 STK31Q9BXU1 1019 aa19.3■□□□□ 0.68
ACTB-204ENST00000425660 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
ACTB-204ENST00000425660 PCDH11XQ9BZA7 1347 aa19.3■□□□□ 0.68
ACTB-204ENST00000425660 PCDH11YQ9BZA8 1340 aa19.3■□□□□ 0.68
ACTB-204ENST00000425660 ZBTB7BO15156 539 aaPredicted RBP19.3■□□□□ 0.68
ACTB-204ENST00000425660 INTS3Q68E01 1043 aaKnown RBP19.3■□□□□ 0.68
ACTB-204ENST00000425660 KCNQ3O43525 872 aa19.29■□□□□ 0.68
ACTB-204ENST00000425660 ZCRB1Q8TBF4 217 aaKnown RBP19.29■□□□□ 0.68
ACTB-204ENST00000425660 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.68
ACTB-204ENST00000425660 HDGFL1Q5TGJ6 251 aa19.27■□□□□ 0.68
ACTB-204ENST00000425660 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
ACTB-204ENST00000425660 HDAC1Q13547 482 aaPredicted RBP19.26■□□□□ 0.67
ACTB-204ENST00000425660 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
ACTB-204ENST00000425660 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
ACTB-204ENST00000425660 ZNF790Q6PG37 636 aa19.25■□□□□ 0.67
ACTB-204ENST00000425660 G2E3Q7L622 706 aa19.25■□□□□ 0.67
ACTB-204ENST00000425660 FLIIQ13045 1269 aa19.25■□□□□ 0.67
ACTB-204ENST00000425660 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
ACTB-204ENST00000425660 DISP2A7MBM2 1401 aa19.25■□□□□ 0.67
ACTB-204ENST00000425660 SHANK3Q9BYB0 1731 aa19.25■□□□□ 0.67
ACTB-204ENST00000425660 PLCH1Q4KWH8 1693 aa19.23■□□□□ 0.67
ACTB-204ENST00000425660 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
ACTB-204ENST00000425660 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
ACTB-204ENST00000425660 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
ACTB-204ENST00000425660 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
ACTB-204ENST00000425660 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
ACTB-204ENST00000425660 PXDNLA1KZ92 1463 aa19.2■□□□□ 0.66
ACTB-204ENST00000425660 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
ACTB-204ENST00000425660 CCT4P50991 539 aaKnown RBP19.2■□□□□ 0.66
ACTB-204ENST00000425660 CABP4P57796 275 aa19.2■□□□□ 0.66
ACTB-204ENST00000425660 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
ACTB-204ENST00000425660 EIF2S2P20042 333 aaKnown RBP19.19■□□□□ 0.66
ACTB-204ENST00000425660 FKBP5Q13451 457 aaPredicted RBP19.19■□□□□ 0.66
ACTB-204ENST00000425660 CHPF2Q9P2E5 772 aa19.19■□□□□ 0.66
ACTB-204ENST00000425660 USP35Q9P2H5 1018 aa19.19■□□□□ 0.66
ACTB-204ENST00000425660 ADAMTS2O95450 1211 aa19.18■□□□□ 0.66
ACTB-204ENST00000425660 SLC39A6Q13433 755 aa19.18■□□□□ 0.66
ACTB-204ENST00000425660 SKAP1Q86WV1 359 aa19.18■□□□□ 0.66
ACTB-204ENST00000425660 SLIT2O94813 1529 aa19.18■□□□□ 0.66
ACTB-204ENST00000425660 F6X3S4 739 aa19.17■□□□□ 0.66
ACTB-204ENST00000425660 SMC5Q8IY18 1101 aa19.17■□□□□ 0.66
ACTB-204ENST00000425660 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
ACTB-204ENST00000425660 JCADQ9P266 1359 aa19.17■□□□□ 0.66
ACTB-204ENST00000425660 NWD2Q9ULI1 1742 aa19.17■□□□□ 0.66
ACTB-204ENST00000425660 DDX54Q8TDD1 881 aaKnown RBP19.16■□□□□ 0.66
ACTB-204ENST00000425660 FBXO41Q8TF61 875 aa19.16■□□□□ 0.66
ACTB-204ENST00000425660 ZNF496Q96IT1 587 aaPredicted RBP19.16■□□□□ 0.66
ACTB-204ENST00000425660 THRAP3Q9Y2W1 955 aaKnown RBP19.16■□□□□ 0.66
ACTB-204ENST00000425660 N4BP2Q86UW6 1770 aaPredicted RBP19.16■□□□□ 0.66
ACTB-204ENST00000425660 PRAMEF22A3QJZ6 481 aa19.16■□□□□ 0.66
ACTB-204ENST00000425660 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
ACTB-204ENST00000425660 GLI3P10071 1580 aa19.16■□□□□ 0.66
ACTB-204ENST00000425660 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
ACTB-204ENST00000425660 CDCA7Q9BWT1 371 aaPredicted RBP19.15■□□□□ 0.66
ACTB-204ENST00000425660 RBM19Q9Y4C8 960 aaKnown RBP19.15■□□□□ 0.66
ACTB-204ENST00000425660 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
ACTB-204ENST00000425660 WNK3Q9BYP7 1800 aa19.14■□□□□ 0.65
ACTB-204ENST00000425660 SLC4A10Q6U841 1118 aa19.14■□□□□ 0.65
ACTB-204ENST00000425660 ATP10DQ9P241 1426 aa19.14■□□□□ 0.65
ACTB-204ENST00000425660 PAPPAQ13219 1627 aa19.14■□□□□ 0.65
ACTB-204ENST00000425660 SNRPA1P09661 255 aaKnown RBP19.14■□□□□ 0.65
ACTB-204ENST00000425660 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.65
ACTB-204ENST00000425660 DDX21Q9NR30 783 aaKnown RBP eCLIP19.14■□□□□ 0.65
ACTB-204ENST00000425660 C5P01031 1676 aa19.13■□□□□ 0.65
ACTB-204ENST00000425660 PDIA6Q15084 440 aa19.13■□□□□ 0.65
ACTB-204ENST00000425660 MEIS3Q99687 375 aa19.13■□□□□ 0.65
ACTB-204ENST00000425660 C1orf115Q9H7X2 142 aa19.13■□□□□ 0.65
ACTB-204ENST00000425660 HYPKQ9NX55 129 aa19.13■□□□□ 0.65
ACTB-204ENST00000425660 TNS2Q63HR2 1409 aa19.13■□□□□ 0.65
ACTB-204ENST00000425660 TOGARAM1Q9Y4F4 1720 aa19.13■□□□□ 0.65
ACTB-204ENST00000425660 UBR2Q8IWV8 1755 aa19.12■□□□□ 0.65
ACTB-204ENST00000425660 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
ACTB-204ENST00000425660 LRP6O75581 1613 aa19.12■□□□□ 0.65
ACTB-204ENST00000425660 SPATA31A5Q5VU36 1347 aa19.11■□□□□ 0.65
ACTB-204ENST00000425660 SPATA31A7Q8IWB4 1347 aa19.11■□□□□ 0.65
ACTB-204ENST00000425660 PROSER3Q2NL68 480 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms