RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CLTCQ00610 1675 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 ZBTB7CA1YPR0 619 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 MAP4K4O95819 1239 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 IBTKQ9P2D0 1353 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 XPCQ01831 940 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 LTV1Q96GA3 475 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 FLIIQ13045 1269 aa9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 LRRFIP2Q9Y608 721 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 TPM2P07951 284 aa9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 OSBPL3Q9H4L5 887 aa9.16□□□□□ -0.94
SMARCC1-202ENST00000425518 OFD1O75665 1012 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 CHMLP26374 656 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 RBM10P98175 930 aaKnown RBP9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 LRSAM1Q6UWE0 723 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 UNC5CLQ8IV45 518 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 MPNDQ8N594 471 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 NGDNQ8NEJ9 315 aaKnown RBP9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 GNAI3P08754 354 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 KNDC1Q76NI1 1749 aa9.15□□□□□ -0.94
SMARCC1-202ENST00000425518 PTMAP06454 111 aaKnown RBP9.15□□□□□ -0.95
SMARCC1-202ENST00000425518 EYA1Q99502 592 aa9.15□□□□□ -0.95
SMARCC1-202ENST00000425518 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.95
SMARCC1-202ENST00000425518 MCM2P49736 904 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 CCDC30Q5VVM6 783 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 PPP6R1Q9UPN7 881 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 DLC1Q96QB1 1528 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 ROBO2Q9HCK4 1378 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 CRB1P82279 1406 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 BRD1O95696 1058 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 MBD3O95983 291 aa9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 NOL7Q9UMY1 257 aaKnown RBP9.14□□□□□ -0.95
SMARCC1-202ENST00000425518 SURF6O75683 361 aaKnown RBP9.13□□□□□ -0.95
SMARCC1-202ENST00000425518 DTNBO60941 627 aa9.13□□□□□ -0.95
SMARCC1-202ENST00000425518 GADD45BO75293 160 aaPredicted RBP9.13□□□□□ -0.95
SMARCC1-202ENST00000425518 UBTFL1P0CB47 393 aaPredicted RBP9.13□□□□□ -0.95
SMARCC1-202ENST00000425518 EIF2S2P20042 333 aaKnown RBP9.13□□□□□ -0.95
SMARCC1-202ENST00000425518 SIRT1Q96EB6 747 aa9.13□□□□□ -0.95
SMARCC1-202ENST00000425518 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
SMARCC1-202ENST00000425518 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 PDLIM2Q96JY6 352 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 REREQ9P2R6 1566 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 NLRP6P59044 892 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 CUL4AQ13619 759 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 IL25Q9H293 177 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 TSPY26PQ9H489 355 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 HS1BP3Q53T59 392 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 USP48Q86UV5 1035 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 USP44Q9H0E7 712 aa9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
SMARCC1-202ENST00000425518 RICTORQ6R327 1708 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 GNAT3A8MTJ3 354 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 PHAXQ9H814 394 aaKnown RBP9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 ZKSCAN5Q9Y2L8 839 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 ANAPC15P60006 121 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 PPP1R42Q7Z4L9 355 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 SYAP1Q96A49 352 aaPredicted RBP9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 ARID3AQ99856 593 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 DLG5Q8TDM6 1919 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 PLEKHG5O94827 1062 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 SRCIN1Q9C0H9 1055 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 SALL3Q9BXA9 1300 aa9.11□□□□□ -0.95
SMARCC1-202ENST00000425518 LTKP29376 864 aa9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 PLCB2Q00722 1185 aa9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 USHBP1Q8N6Y0 703 aa9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 IL17REQ8NFR9 667 aa9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 INTS4Q96HW7 963 aaKnown RBP9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 OS9Q13438 667 aaPredicted RBP9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 STAP2Q9UGK3 403 aa9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 WDR33Q9C0J8 1336 aaKnown RBP9.1□□□□□ -0.95
SMARCC1-202ENST00000425518 ZNF500O60304 480 aaPredicted RBP9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 TAF7Q15545 349 aaPredicted RBP9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 DNTTIP2Q5QJE6 756 aaKnown RBP9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 CWC27Q6UX04 472 aaKnown RBP9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 SPG7Q9UQ90 795 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 USP6P35125 1406 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 UQCRHLA0A096LP55 91 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 UQCRHP07919 91 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 CPA1P15085 419 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 ZNF830Q96NB3 372 aaPredicted RBP9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 AMOTL2Q9Y2J4 779 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 ANXA1P04083 346 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 RHPN1Q8TCX5 695 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 DDX54Q8TDD1 881 aaKnown RBP9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 ZMYND15Q9H091 742 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 PDCL3Q9H2J4 239 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 CNPY2Q9Y2B0 182 aa9.09□□□□□ -0.95
SMARCC1-202ENST00000425518 OVOS2A0A0J9YW53 1432 aa9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 OVOS2Q6IE36 1432 aa9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 ARHGEF10O15013 1369 aa9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 FLT4P35916 1363 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms