RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 NWD1Q149M9 1564 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 HMMRO75330 724 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
UBR4-207ENST00000425413 KRT28Q7Z3Y7 464 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 SDSP20132 328 aa14.33□□□□□ -0.12
UBR4-207ENST00000425413 RBM25P49756 843 aaKnown RBP14.33□□□□□ -0.12
UBR4-207ENST00000425413 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.12
UBR4-207ENST00000425413 ANKRD24Q8TF21 1146 aa14.33□□□□□ -0.12
UBR4-207ENST00000425413 CHPF2Q9P2E5 772 aa14.32□□□□□ -0.12
UBR4-207ENST00000425413 KIF2CQ99661 725 aa14.32□□□□□ -0.12
UBR4-207ENST00000425413 BTBD11A6QL63 1104 aa14.31□□□□□ -0.12
UBR4-207ENST00000425413 CABLES1Q8TDN4 633 aa14.31□□□□□ -0.12
UBR4-207ENST00000425413 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
UBR4-207ENST00000425413 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
UBR4-207ENST00000425413 PRAMEF22A3QJZ6 481 aa14.3□□□□□ -0.12
UBR4-207ENST00000425413 EIF4A1P60842 406 aaKnown RBP14.3□□□□□ -0.12
UBR4-207ENST00000425413 C1orf141Q5JVX7 400 aa14.3□□□□□ -0.12
UBR4-207ENST00000425413 GZF1Q9H116 711 aaPredicted RBP14.3□□□□□ -0.12
UBR4-207ENST00000425413 IL1RAPL2Q9NP60 686 aa14.3□□□□□ -0.12
UBR4-207ENST00000425413 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
UBR4-207ENST00000425413 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
UBR4-207ENST00000425413 MARF1Q9Y4F3 1742 aaKnown RBP14.3□□□□□ -0.12
UBR4-207ENST00000425413 GNAI3P08754 354 aa14.29□□□□□ -0.12
UBR4-207ENST00000425413 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
UBR4-207ENST00000425413 CHD2O14647 1828 aaKnown RBP14.29□□□□□ -0.12
UBR4-207ENST00000425413 PI4KAP2A4QPH2 592 aa14.29□□□□□ -0.12
UBR4-207ENST00000425413 PI4KAP1Q8N8J0 262 aa14.29□□□□□ -0.12
UBR4-207ENST00000425413 NLRP2Q9NX02 1062 aa14.29□□□□□ -0.12
UBR4-207ENST00000425413 CHMP5Q9NZZ3 219 aa14.28□□□□□ -0.12
UBR4-207ENST00000425413 HSPA2P54652 639 aa14.28□□□□□ -0.12
UBR4-207ENST00000425413 PDE1AP54750 535 aa14.28□□□□□ -0.12
UBR4-207ENST00000425413 NFAT5O94916 1531 aa14.27□□□□□ -0.12
UBR4-207ENST00000425413 CHRNA2Q15822 529 aa14.27□□□□□ -0.12
UBR4-207ENST00000425413 AKAP4Q5JQC9 854 aa14.27□□□□□ -0.12
UBR4-207ENST00000425413 LRRCC1Q9C099 1032 aa14.27□□□□□ -0.12
UBR4-207ENST00000425413 NBPF7P0C2Y1 421 aaPredicted RBP14.27□□□□□ -0.13
UBR4-207ENST00000425413 RILPL2Q969X0 211 aa14.27□□□□□ -0.13
UBR4-207ENST00000425413 TRIM6-TRIM34B2RNG4 842 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 ATF3P18847 181 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 PROSER3Q2NL68 480 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 SRCIN1Q9C0H9 1055 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 LTN1O94822 1766 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
UBR4-207ENST00000425413 ATP8B2P98198 1209 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 C19orf44Q9H6X5 657 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 PXDNQ92626 1479 aa14.26□□□□□ -0.13
UBR4-207ENST00000425413 MAP4K4O95819 1239 aaPredicted RBP14.25□□□□□ -0.13
UBR4-207ENST00000425413 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
UBR4-207ENST00000425413 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
UBR4-207ENST00000425413 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
UBR4-207ENST00000425413 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
UBR4-207ENST00000425413 SURF6O75683 361 aaKnown RBP14.25□□□□□ -0.13
UBR4-207ENST00000425413 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
UBR4-207ENST00000425413 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
UBR4-207ENST00000425413 MCM4P33991 863 aa14.25□□□□□ -0.13
UBR4-207ENST00000425413 USP26Q9BXU7 913 aa14.25□□□□□ -0.13
UBR4-207ENST00000425413 SRGAP3O43295 1099 aa14.24□□□□□ -0.13
UBR4-207ENST00000425413 MX1P20591 662 aa14.24□□□□□ -0.13
UBR4-207ENST00000425413 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
UBR4-207ENST00000425413 SNX21Q969T3 373 aa14.24□□□□□ -0.13
UBR4-207ENST00000425413 K7ELQ4 463 aaPredicted RBP14.23□□□□□ -0.13
UBR4-207ENST00000425413 RGPD2P0DJD1 1756 aa14.23□□□□□ -0.13
UBR4-207ENST00000425413 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
UBR4-207ENST00000425413 PIP4K2AP48426 406 aaPredicted RBP14.22□□□□□ -0.13
UBR4-207ENST00000425413 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
UBR4-207ENST00000425413 TMEM94Q12767 1356 aa14.22□□□□□ -0.13
UBR4-207ENST00000425413 CWF19L2Q2TBE0 894 aaKnown RBP14.22□□□□□ -0.13
UBR4-207ENST00000425413 UNC5CLQ8IV45 518 aa14.22□□□□□ -0.13
UBR4-207ENST00000425413 RAPGEF4Q8WZA2 1011 aa14.22□□□□□ -0.13
UBR4-207ENST00000425413 C1orf167Q5SNV9 1468 aa14.22□□□□□ -0.13
UBR4-207ENST00000425413 MAP3K2Q9Y2U5 619 aa14.22□□□□□ -0.13
UBR4-207ENST00000425413 ADAMTSL3P82987 1691 aa14.21□□□□□ -0.13
UBR4-207ENST00000425413 LRRC37A3O60309 1634 aa14.21□□□□□ -0.14
UBR4-207ENST00000425413 OS9Q13438 667 aaPredicted RBP14.21□□□□□ -0.14
UBR4-207ENST00000425413 BEND3Q5T5X7 828 aa14.21□□□□□ -0.14
UBR4-207ENST00000425413 NOL8Q76FK4 1167 aaKnown RBP14.21□□□□□ -0.14
UBR4-207ENST00000425413 ERBB3P21860 1342 aa14.2□□□□□ -0.14
UBR4-207ENST00000425413 ERC2O15083 957 aa14.2□□□□□ -0.14
UBR4-207ENST00000425413 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
UBR4-207ENST00000425413 MYL6BP14649 208 aa14.2□□□□□ -0.14
UBR4-207ENST00000425413 TNPO1Q92973 898 aaKnown RBP14.2□□□□□ -0.14
UBR4-207ENST00000425413 IBTKQ9P2D0 1353 aaPredicted RBP14.2□□□□□ -0.14
UBR4-207ENST00000425413 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
UBR4-207ENST00000425413 SOS1Q07889 1333 aaPredicted RBP14.19□□□□□ -0.14
UBR4-207ENST00000425413 NFATC2IPQ8NCF5 419 aa14.19□□□□□ -0.14
UBR4-207ENST00000425413 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
UBR4-207ENST00000425413 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
UBR4-207ENST00000425413 ZNF142P52746 1687 aaPredicted RBP14.19□□□□□ -0.14
UBR4-207ENST00000425413 REC8O95072 547 aa14.19□□□□□ -0.14
UBR4-207ENST00000425413 PA2G4Q9UQ80 394 aaKnown RBP14.19□□□□□ -0.14
UBR4-207ENST00000425413 FAM208AQ9UK61 1670 aaKnown RBP14.18□□□□□ -0.14
UBR4-207ENST00000425413 TRAK2O60296 914 aa14.18□□□□□ -0.14
UBR4-207ENST00000425413 SSFA2P28290 1259 aa14.18□□□□□ -0.14
UBR4-207ENST00000425413 RABEP1Q15276 862 aa14.18□□□□□ -0.14
UBR4-207ENST00000425413 SSH3Q8TE77 659 aa14.18□□□□□ -0.14
UBR4-207ENST00000425413 ADCY9O60503 1353 aa14.18□□□□□ -0.14
UBR4-207ENST00000425413 JARID2Q92833 1246 aaPredicted RBP14.18□□□□□ -0.14
UBR4-207ENST00000425413 RHPN1Q8TCX5 695 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms