RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 MRC1P22897 1456 aa27.13■■□□□ 1.93
PMS1-211ENST00000424766 EN1Q05925 392 aaPredicted RBP27.13■■□□□ 1.93
PMS1-211ENST00000424766 TEFQ10587 303 aa27.13■■□□□ 1.93
PMS1-211ENST00000424766 NEUROD2Q15784 382 aa27.13■■□□□ 1.93
PMS1-211ENST00000424766 MCM10Q7L590 875 aa27.13■■□□□ 1.93
PMS1-211ENST00000424766 SMARCC1Q92922 1105 aaPredicted RBP27.13■■□□□ 1.93
PMS1-211ENST00000424766 RRP7AQ9Y3A4 280 aaKnown RBP27.13■■□□□ 1.93
PMS1-211ENST00000424766 SIPA1L3O60292 1781 aaPredicted RBP27.12■■□□□ 1.93
PMS1-211ENST00000424766 DCTN1Q14203 1278 aa27.11■■□□□ 1.93
PMS1-211ENST00000424766 EZH2Q15910 746 aaKnown RBP27.09■■□□□ 1.93
PMS1-211ENST00000424766 NCBP3Q53F19 620 aaKnown RBP27.09■■□□□ 1.93
PMS1-211ENST00000424766 ATG3Q9NT62 314 aa27.09■■□□□ 1.93
PMS1-211ENST00000424766 ASAP1Q9ULH1 1129 aa27.09■■□□□ 1.93
PMS1-211ENST00000424766 TRIM35Q9UPQ4 493 aa27.09■■□□□ 1.93
PMS1-211ENST00000424766 LY75O60449 1722 aa27.09■■□□□ 1.93
PMS1-211ENST00000424766 PROM2Q8N271 834 aa27.07■■□□□ 1.92
PMS1-211ENST00000424766 TAF7Q15545 349 aaPredicted RBP27.06■■□□□ 1.92
PMS1-211ENST00000424766 TXNRD1Q16881 649 aa27.06■■□□□ 1.92
PMS1-211ENST00000424766 PALLDQ8WX93 1383 aa27.06■■□□□ 1.92
PMS1-211ENST00000424766 SLC27A3Q5K4L6 730 aa27.04■■□□□ 1.92
PMS1-211ENST00000424766 NGEFQ8N5V2 710 aa27.04■■□□□ 1.92
PMS1-211ENST00000424766 RREB1Q92766 1687 aa27.04■■□□□ 1.92
PMS1-211ENST00000424766 CCDC27Q2M243 656 aa27.03■■□□□ 1.92
PMS1-211ENST00000424766 THUMPD2Q9BTF0 503 aaKnown RBP27.03■■□□□ 1.92
PMS1-211ENST00000424766 PAPPAQ13219 1627 aa27.02■■□□□ 1.92
PMS1-211ENST00000424766 BTBD11A6QL63 1104 aa27.02■■□□□ 1.92
PMS1-211ENST00000424766 HMGB2P26583 209 aaKnown RBP27.01■■□□□ 1.91
PMS1-211ENST00000424766 SLC39A6Q13433 755 aa27■■□□□ 1.91
PMS1-211ENST00000424766 LOC102724428A0A0B4J2F2 783 aa26.99■■□□□ 1.91
PMS1-211ENST00000424766 SIK1P57059 783 aa26.99■■□□□ 1.91
PMS1-211ENST00000424766 ZNF790Q6PG37 636 aa26.99■■□□□ 1.91
PMS1-211ENST00000424766 TTC5Q8N0Z6 440 aa26.99■■□□□ 1.91
PMS1-211ENST00000424766 BABAM1Q9NWV8 329 aa26.99■■□□□ 1.91
PMS1-211ENST00000424766 ZNF831Q5JPB2 1677 aa26.98■■□□□ 1.91
PMS1-211ENST00000424766 CALD1Q05682 793 aaKnown RBP26.98■■□□□ 1.91
PMS1-211ENST00000424766 LRRC4BQ9NT99 713 aa26.98■■□□□ 1.91
PMS1-211ENST00000424766 CCNL1Q9UK58 526 aaPredicted RBP26.98■■□□□ 1.91
PMS1-211ENST00000424766 UBR2Q8IWV8 1755 aa26.97■■□□□ 1.91
PMS1-211ENST00000424766 NUP188Q5SRE5 1749 aa26.97■■□□□ 1.91
PMS1-211ENST00000424766 WWC1Q8IX03 1113 aa26.97■■□□□ 1.91
PMS1-211ENST00000424766 RBM42Q9BTD8 480 aaKnown RBP26.97■■□□□ 1.91
PMS1-211ENST00000424766 PTCD1O75127 700 aaKnown RBP26.96■■□□□ 1.91
PMS1-211ENST00000424766 TAF1LQ8IZX4 1826 aa26.95■■□□□ 1.91
PMS1-211ENST00000424766 SENP3-EIF4A1A0A087X0R7 540 aa26.95■■□□□ 1.9
PMS1-211ENST00000424766 ATP6V1AP38606 617 aa26.94■■□□□ 1.9
PMS1-211ENST00000424766 MIS18AQ9NYP9 233 aa26.94■■□□□ 1.9
PMS1-211ENST00000424766 KDM3BQ7LBC6 1761 aa26.94■■□□□ 1.9
PMS1-211ENST00000424766 KCNQ3O43525 872 aa26.93■■□□□ 1.9
PMS1-211ENST00000424766 KCNQ4P56696 695 aa26.93■■□□□ 1.9
PMS1-211ENST00000424766 VSIG10Q8N0Z9 540 aa26.93■■□□□ 1.9
PMS1-211ENST00000424766 SLC4A9Q96Q91 983 aa26.93■■□□□ 1.9
PMS1-211ENST00000424766 SALL2Q9Y467 1007 aaPredicted RBP26.93■■□□□ 1.9
PMS1-211ENST00000424766 KCPQ6ZWJ8 1503 aa26.93■■□□□ 1.9
PMS1-211ENST00000424766 CHL1O00533 1208 aa26.92■■□□□ 1.9
PMS1-211ENST00000424766 NBPF14Q5TI25 921 aa26.92■■□□□ 1.9
PMS1-211ENST00000424766 ZNF496Q96IT1 587 aaPredicted RBP26.92■■□□□ 1.9
PMS1-211ENST00000424766 FMNL2Q96PY5 1086 aa26.92■■□□□ 1.9
PMS1-211ENST00000424766 WDR63Q8IWG1 891 aa26.91■■□□□ 1.9
PMS1-211ENST00000424766 CFAP44Q96MT7 982 aa26.91■■□□□ 1.9
PMS1-211ENST00000424766 TSPYL4Q9UJ04 414 aa26.91■■□□□ 1.9
PMS1-211ENST00000424766 C5P01031 1676 aa26.9■■□□□ 1.9
PMS1-211ENST00000424766 GNAI1P63096 354 aa26.9■■□□□ 1.9
PMS1-211ENST00000424766 ITPK1Q13572 414 aa26.9■■□□□ 1.9
PMS1-211ENST00000424766 CICQ96RK0 1608 aaPredicted RBP26.9■■□□□ 1.9
PMS1-211ENST00000424766 HEG1Q9ULI3 1381 aa26.89■■□□□ 1.9
PMS1-211ENST00000424766 ZNF853P0CG23 659 aa26.89■■□□□ 1.9
PMS1-211ENST00000424766 IFT57Q9NWB7 429 aa26.89■■□□□ 1.9
PMS1-211ENST00000424766 LAS1LQ9Y4W2 734 aaKnown RBP26.89■■□□□ 1.9
PMS1-211ENST00000424766 IL16Q14005 1332 aa26.89■■□□□ 1.89
PMS1-211ENST00000424766 EIF4A1P60842 406 aaKnown RBP26.87■■□□□ 1.89
PMS1-211ENST00000424766 TEX13AQ9BXU3 409 aaPredicted RBP26.87■■□□□ 1.89
PMS1-211ENST00000424766 TJP1Q07157 1748 aa26.86■■□□□ 1.89
PMS1-211ENST00000424766 COL5A3P25940 1745 aaPredicted RBP26.85■■□□□ 1.89
PMS1-211ENST00000424766 LINC00116Q8NCU8 138 aa26.85■■□□□ 1.89
PMS1-211ENST00000424766 STK32BQ9NY57 414 aa26.85■■□□□ 1.89
PMS1-211ENST00000424766 SNRPA1P09661 255 aaKnown RBP26.84■■□□□ 1.89
PMS1-211ENST00000424766 SLC15A2Q16348 729 aa26.84■■□□□ 1.89
PMS1-211ENST00000424766 RC3H1Q5TC82 1133 aaKnown RBP26.84■■□□□ 1.89
PMS1-211ENST00000424766 DNAJC10Q8IXB1 793 aa26.84■■□□□ 1.89
PMS1-211ENST00000424766 AKT1S1Q96B36 256 aa26.84■■□□□ 1.89
PMS1-211ENST00000424766 C4BP0C0L5 1744 aa26.84■■□□□ 1.89
PMS1-211ENST00000424766 ZNF521Q96K83 1311 aa26.84■■□□□ 1.89
PMS1-211ENST00000424766 ANO8Q9HCE9 1232 aaPredicted RBP26.83■■□□□ 1.89
PMS1-211ENST00000424766 MBIPQ9NS73 344 aa26.82■■□□□ 1.88
PMS1-211ENST00000424766 MYH14Q7Z406 1995 aaKnown RBP26.81■■□□□ 1.88
PMS1-211ENST00000424766 CYP19A1P11511 503 aaPredicted RBP26.81■■□□□ 1.88
PMS1-211ENST00000424766 GIGYF1O75420 1035 aaPredicted RBP26.8■■□□□ 1.88
PMS1-211ENST00000424766 STARD3NLO95772 234 aa26.8■■□□□ 1.88
PMS1-211ENST00000424766 ZNF827Q17R98 1081 aa26.8■■□□□ 1.88
PMS1-211ENST00000424766 CNTNAP4Q9C0A0 1308 aa26.8■■□□□ 1.88
PMS1-211ENST00000424766 CRKLP46109 303 aaKnown RBP26.78■■□□□ 1.88
PMS1-211ENST00000424766 AK7Q96M32 723 aa26.78■■□□□ 1.88
PMS1-211ENST00000424766 TFCP2L1Q9NZI6 479 aa26.78■■□□□ 1.88
PMS1-211ENST00000424766 USP16Q9Y5T5 823 aa26.78■■□□□ 1.88
PMS1-211ENST00000424766 QSER1Q2KHR3 1735 aa26.78■■□□□ 1.88
PMS1-211ENST00000424766 UBR3Q6ZT12 1888 aa26.76■■□□□ 1.88
PMS1-211ENST00000424766 HNRNPUQ00839 825 aaKnown RBP eCLIP26.76■■□□□ 1.87
PMS1-211ENST00000424766 GOLGA2Q08379 1002 aa26.76■■□□□ 1.87
PMS1-211ENST00000424766 R3HDM1Q15032 1099 aaKnown RBP26.76■■□□□ 1.87
PMS1-211ENST00000424766 CCDC87Q9NVE4 849 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms