RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
PRPF39-202ENST00000424478 CDCA7Q9BWT1 371 aaPredicted RBP17.48■□□□□ 0.39
PRPF39-202ENST00000424478 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
PRPF39-202ENST00000424478 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
PRPF39-202ENST00000424478 BCL2L13Q9BXK5 485 aa17.48■□□□□ 0.39
PRPF39-202ENST00000424478 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
PRPF39-202ENST00000424478 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
PRPF39-202ENST00000424478 NECTIN2Q92692 538 aa17.48■□□□□ 0.39
PRPF39-202ENST00000424478 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
PRPF39-202ENST00000424478 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
PRPF39-202ENST00000424478 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
PRPF39-202ENST00000424478 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
PRPF39-202ENST00000424478 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
PRPF39-202ENST00000424478 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
PRPF39-202ENST00000424478 CHL1O00533 1208 aa17.46■□□□□ 0.39
PRPF39-202ENST00000424478 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
PRPF39-202ENST00000424478 NGEFQ8N5V2 710 aa17.46■□□□□ 0.39
PRPF39-202ENST00000424478 GNAI1P63096 354 aa17.46■□□□□ 0.39
PRPF39-202ENST00000424478 ONECUT3O60422 494 aaPredicted RBP17.46■□□□□ 0.39
PRPF39-202ENST00000424478 PIGBQ92521 554 aa17.46■□□□□ 0.39
PRPF39-202ENST00000424478 NKX1-1Q15270 411 aaPredicted RBP17.45■□□□□ 0.38
PRPF39-202ENST00000424478 MYH16Q9H6N6 1097 aa17.45■□□□□ 0.38
PRPF39-202ENST00000424478 ASAP1Q9ULH1 1129 aa17.45■□□□□ 0.38
PRPF39-202ENST00000424478 PTCD1O75127 700 aaKnown RBP17.45■□□□□ 0.38
PRPF39-202ENST00000424478 RGS12O14924 1447 aa17.44■□□□□ 0.38
PRPF39-202ENST00000424478 ITGB4P16144 1822 aa17.44■□□□□ 0.38
PRPF39-202ENST00000424478 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
PRPF39-202ENST00000424478 TMOD3Q9NYL9 352 aa17.44■□□□□ 0.38
PRPF39-202ENST00000424478 KRT27Q7Z3Y8 459 aa17.43■□□□□ 0.38
PRPF39-202ENST00000424478 ADAMTS7Q9UKP4 1686 aa17.43■□□□□ 0.38
PRPF39-202ENST00000424478 KCNQ4P56696 695 aa17.43■□□□□ 0.38
PRPF39-202ENST00000424478 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
PRPF39-202ENST00000424478 IL16Q14005 1332 aa17.43■□□□□ 0.38
PRPF39-202ENST00000424478 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
PRPF39-202ENST00000424478 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
PRPF39-202ENST00000424478 IRX6P78412 446 aaPredicted RBP17.41■□□□□ 0.38
PRPF39-202ENST00000424478 SUPT16HQ9Y5B9 1047 aaKnown RBP17.41■□□□□ 0.38
PRPF39-202ENST00000424478 BCAR3O75815 825 aa17.41■□□□□ 0.38
PRPF39-202ENST00000424478 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
PRPF39-202ENST00000424478 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
PRPF39-202ENST00000424478 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
PRPF39-202ENST00000424478 ERVV-2B6SEH9 535 aa17.4■□□□□ 0.38
PRPF39-202ENST00000424478 PLIN1O60240 522 aa17.4■□□□□ 0.38
PRPF39-202ENST00000424478 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
PRPF39-202ENST00000424478 TWISTNBQ3B726 338 aaPredicted RBP17.39■□□□□ 0.37
PRPF39-202ENST00000424478 TRIM37O94972 964 aa17.39■□□□□ 0.37
PRPF39-202ENST00000424478 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
PRPF39-202ENST00000424478 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
PRPF39-202ENST00000424478 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
PRPF39-202ENST00000424478 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
PRPF39-202ENST00000424478 ANXA1P04083 346 aa17.38■□□□□ 0.37
PRPF39-202ENST00000424478 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
PRPF39-202ENST00000424478 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
PRPF39-202ENST00000424478 MRC1P22897 1456 aa17.38■□□□□ 0.37
PRPF39-202ENST00000424478 BCL9O00512 1426 aa17.37■□□□□ 0.37
PRPF39-202ENST00000424478 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
PRPF39-202ENST00000424478 VAMP4O75379 141 aa17.36■□□□□ 0.37
PRPF39-202ENST00000424478 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
PRPF39-202ENST00000424478 TNNQ9UQP3 1299 aa17.35■□□□□ 0.37
PRPF39-202ENST00000424478 SSH1Q8WYL5 1049 aa17.35■□□□□ 0.37
PRPF39-202ENST00000424478 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
PRPF39-202ENST00000424478 FRAT1Q92837 279 aaPredicted RBP17.34■□□□□ 0.37
PRPF39-202ENST00000424478 SBF2Q86WG5 1849 aa17.34■□□□□ 0.37
PRPF39-202ENST00000424478 C5P01031 1676 aa17.33■□□□□ 0.37
PRPF39-202ENST00000424478 RARSP54136 660 aaKnown RBP17.33■□□□□ 0.37
PRPF39-202ENST00000424478 GIGYF1O75420 1035 aaPredicted RBP17.33■□□□□ 0.36
PRPF39-202ENST00000424478 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
PRPF39-202ENST00000424478 BTAF1O14981 1849 aa17.32■□□□□ 0.36
PRPF39-202ENST00000424478 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 PROSER3Q2NL68 480 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 FMNL2Q96PY5 1086 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 FAM196AQ6ZSG2 479 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 DNAJC10Q8IXB1 793 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
PRPF39-202ENST00000424478 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
PRPF39-202ENST00000424478 G2E3Q7L622 706 aa17.3■□□□□ 0.36
PRPF39-202ENST00000424478 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
PRPF39-202ENST00000424478 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
PRPF39-202ENST00000424478 MYL6BP14649 208 aa17.29■□□□□ 0.36
PRPF39-202ENST00000424478 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
PRPF39-202ENST00000424478 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
PRPF39-202ENST00000424478 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
PRPF39-202ENST00000424478 A1BGP04217 495 aa17.29■□□□□ 0.36
PRPF39-202ENST00000424478 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
PRPF39-202ENST00000424478 NHSQ6T4R5 1651 aa17.28■□□□□ 0.36
PRPF39-202ENST00000424478 SLC4A2P04920 1241 aa17.28■□□□□ 0.36
PRPF39-202ENST00000424478 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
PRPF39-202ENST00000424478 ITPK1Q13572 414 aa17.28■□□□□ 0.36
PRPF39-202ENST00000424478 PHAXQ9H814 394 aaKnown RBP17.28■□□□□ 0.36
PRPF39-202ENST00000424478 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
PRPF39-202ENST00000424478 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
PRPF39-202ENST00000424478 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.35
PRPF39-202ENST00000424478 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.35
PRPF39-202ENST00000424478 SIK1P57059 783 aa17.27■□□□□ 0.35
PRPF39-202ENST00000424478 NOB1Q9ULX3 412 aaKnown RBP17.26■□□□□ 0.35
PRPF39-202ENST00000424478 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
PRPF39-202ENST00000424478 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
PRPF39-202ENST00000424478 AIMP1Q12904 312 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms