RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
DENND3-202ENST00000424248 CDKL5O76039 1030 aa16.5■□□□□ 0.23
DENND3-202ENST00000424248 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
DENND3-202ENST00000424248 CWC27Q6UX04 472 aaKnown RBP16.5■□□□□ 0.23
DENND3-202ENST00000424248 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
DENND3-202ENST00000424248 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
DENND3-202ENST00000424248 STARD3NLO95772 234 aa16.5■□□□□ 0.23
DENND3-202ENST00000424248 SERPINC1P01008 464 aa16.5■□□□□ 0.23
DENND3-202ENST00000424248 ME1P48163 572 aa16.5■□□□□ 0.23
DENND3-202ENST00000424248 TSPYL1Q9H0U9 437 aa16.5■□□□□ 0.23
DENND3-202ENST00000424248 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
DENND3-202ENST00000424248 SMTNL1A8MU46 457 aa16.49■□□□□ 0.23
DENND3-202ENST00000424248 ASXL1Q8IXJ9 1541 aa16.49■□□□□ 0.23
DENND3-202ENST00000424248 RNF123Q5XPI4 1314 aa16.49■□□□□ 0.23
DENND3-202ENST00000424248 RRP12Q5JTH9 1297 aaKnown RBP16.49■□□□□ 0.23
DENND3-202ENST00000424248 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
DENND3-202ENST00000424248 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
DENND3-202ENST00000424248 CAVIN2O95810 425 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 UBXN4Q92575 508 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 ARHGAP45Q92619 1136 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 A2MP01023 1474 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 PTPN14Q15678 1187 aa16.48■□□□□ 0.23
DENND3-202ENST00000424248 MAP4K4O95819 1239 aaPredicted RBP16.47■□□□□ 0.23
DENND3-202ENST00000424248 MPNDQ8N594 471 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
DENND3-202ENST00000424248 H0YHG0 523 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 KIF18AQ8NI77 898 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 DNAAF4Q8WXU2 420 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 AKAP2Q9Y2D5 859 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
DENND3-202ENST00000424248 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 ZNF518AQ6AHZ1 1483 aa16.47■□□□□ 0.23
DENND3-202ENST00000424248 LRSAM1Q6UWE0 723 aa16.46■□□□□ 0.23
DENND3-202ENST00000424248 SYCP2Q9BX26 1530 aa16.46■□□□□ 0.23
DENND3-202ENST00000424248 CCDC69A6NI79 296 aa16.46■□□□□ 0.23
DENND3-202ENST00000424248 CTAGE5O15320 804 aa16.46■□□□□ 0.23
DENND3-202ENST00000424248 ATP2B1P20020 1258 aa16.46■□□□□ 0.23
DENND3-202ENST00000424248 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
DENND3-202ENST00000424248 KIAA0556O60303 1618 aa16.46■□□□□ 0.22
DENND3-202ENST00000424248 INSRP06213 1382 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 EIF2AK4Q9P2K8 1649 aaKnown RBP16.45■□□□□ 0.22
DENND3-202ENST00000424248 NUCB1Q02818 461 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 STK3Q13188 491 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 PPFIBP1Q86W92 1011 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 NUTM1Q86Y26 1132 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 FLIIQ13045 1269 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
DENND3-202ENST00000424248 DDX19AQ9NUU7 478 aaKnown RBP16.45■□□□□ 0.22
DENND3-202ENST00000424248 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
DENND3-202ENST00000424248 WDR62O43379 1518 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 ANO10Q9NW15 660 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 LIMCH1Q9UPQ0 1083 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 TTC21AQ8NDW8 1320 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 ZSCAN23Q3MJ62 389 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
DENND3-202ENST00000424248 POLR3AO14802 1390 aaPredicted RBP16.44■□□□□ 0.22
DENND3-202ENST00000424248 RDXP35241 583 aaKnown RBP16.44■□□□□ 0.22
DENND3-202ENST00000424248 CEBPZQ03701 1054 aaKnown RBP16.44■□□□□ 0.22
DENND3-202ENST00000424248 PDE4CQ08493 712 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 CALCOCO1Q9P1Z2 691 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 USP25Q9UHP3 1055 aa16.44■□□□□ 0.22
DENND3-202ENST00000424248 OFD1O75665 1012 aa16.43■□□□□ 0.22
DENND3-202ENST00000424248 IMMTQ16891 758 aaKnown RBP16.43■□□□□ 0.22
DENND3-202ENST00000424248 ASXL2Q76L83 1435 aa16.43■□□□□ 0.22
DENND3-202ENST00000424248 SFPQP23246 707 aaKnown RBP eCLIP16.43■□□□□ 0.22
DENND3-202ENST00000424248 USP8P40818 1118 aa16.43■□□□□ 0.22
DENND3-202ENST00000424248 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
DENND3-202ENST00000424248 TNRQ92752 1358 aa16.43■□□□□ 0.22
DENND3-202ENST00000424248 CASTP20810 708 aaKnown RBP16.43■□□□□ 0.22
DENND3-202ENST00000424248 WASF1Q92558 559 aa16.43■□□□□ 0.22
DENND3-202ENST00000424248 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
DENND3-202ENST00000424248 NOL7Q9UMY1 257 aaKnown RBP16.43■□□□□ 0.22
DENND3-202ENST00000424248 ZKSCAN5Q9Y2L8 839 aa16.43■□□□□ 0.22
DENND3-202ENST00000424248 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
DENND3-202ENST00000424248 PODXL2Q9NZ53 605 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 PCDHB15Q9Y5E8 787 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 ACEP12821 1306 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 CDK5RAP3Q96JB5 506 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 BCL11BQ9C0K0 894 aaPredicted RBP16.42■□□□□ 0.22
DENND3-202ENST00000424248 MYO6Q9UM54 1294 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 ZSCAN12O43309 604 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 FOXO3O43524 673 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 EPS15P42566 896 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 UBE2HP62256 183 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 TXLNBQ8N3L3 684 aa16.42■□□□□ 0.22
DENND3-202ENST00000424248 ZNHIT6Q9NWK9 470 aaKnown RBP16.42■□□□□ 0.22
DENND3-202ENST00000424248 CALRP27797 417 aaKnown RBP16.41■□□□□ 0.22
DENND3-202ENST00000424248 NAP1L1P55209 391 aaKnown RBP16.41■□□□□ 0.22
DENND3-202ENST00000424248 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
DENND3-202ENST00000424248 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms