RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 CKAP2LQ8IYA6 745 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 EIF3AQ14152 1382 aaKnown RBP8.09□□□□□ -1.11
CNOT4-205ENST00000423368 EME2A4GXA9 379 aaPredicted RBP8.09□□□□□ -1.11
CNOT4-205ENST00000423368 MBD3O95983 291 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 POLD1P28340 1107 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 PPARDQ03181 441 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 MMS22LQ6ZRQ5 1243 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 PPM1EQ8WY54 764 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 MYBL1P10243 752 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 SF3A1Q15459 793 aaKnown RBP8.09□□□□□ -1.11
CNOT4-205ENST00000423368 MUM1L1Q5H9M0 696 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 NBPF6Q5VWK0 638 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 NBPF5PQ86XG9 351 aaPredicted RBP8.09□□□□□ -1.11
CNOT4-205ENST00000423368 NBPF4Q96M43 638 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 TMEM165Q9HC07 324 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 MRFAP1Q9Y605 127 aa8.09□□□□□ -1.11
CNOT4-205ENST00000423368 WIZO95785 1651 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 CAPN15O75808 1086 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
CNOT4-205ENST00000423368 TPM3P06753 285 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 PAXBP1Q9Y5B6 917 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 PTPRCP08575 1304 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 ENO4A6NNW6 628 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 HOMER1Q86YM7 354 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 GOLGA5Q8TBA6 731 aa8.08□□□□□ -1.12
CNOT4-205ENST00000423368 CACTINQ8WUQ7 758 aaKnown RBP8.08□□□□□ -1.12
CNOT4-205ENST00000423368 ACTN2P35609 894 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 INHBEP58166 350 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 NBPF9Q3BBW0 867 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 ZC3H12AQ5D1E8 599 aaKnown RBP8.07□□□□□ -1.12
CNOT4-205ENST00000423368 WWC2Q6AWC2 1192 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 CEP57Q86XR8 500 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 UBXN4Q92575 508 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 ZBTB10Q96DT7 871 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 SASH3O75995 380 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 CALRP27797 417 aaKnown RBP8.07□□□□□ -1.12
CNOT4-205ENST00000423368 CCNHP51946 323 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-205ENST00000423368 MRFAP1L1Q96HT8 127 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 CNPY2Q9Y2B0 182 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 USP4Q13107 963 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 DCAF8Q5TAQ9 597 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 AP1ARQ63HQ0 302 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 REXO1L1PQ8IX06 675 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 NUCKS1Q9H1E3 243 aaKnown RBP8.07□□□□□ -1.12
CNOT4-205ENST00000423368 RPS6KL1Q9Y6S9 549 aa8.07□□□□□ -1.12
CNOT4-205ENST00000423368 EIF4E1BA6NMX2 242 aaKnown RBP8.06□□□□□ -1.12
CNOT4-205ENST00000423368 SSBP05455 408 aaKnown RBP eCLIP8.06□□□□□ -1.12
CNOT4-205ENST00000423368 GCKP35557 465 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 GSCP56915 257 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-205ENST00000423368 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 ZSCAN25Q6NSZ9 544 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 CTCFLQ8NI51 663 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-205ENST00000423368 KAT2BQ92831 832 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 CD248Q9HCU0 757 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 PLEKHG2Q9H7P9 1386 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 A0A087WWV3 80 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 TTC36A6NLP5 189 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 RPSAP08865 295 aaKnown RBP8.06□□□□□ -1.12
CNOT4-205ENST00000423368 NEK4P51957 841 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 CEBPZQ03701 1054 aaKnown RBP8.06□□□□□ -1.12
CNOT4-205ENST00000423368 PARD3BQ8TEW8 1205 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 ERO1AQ96HE7 468 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 NCOA3Q9Y6Q9 1424 aa8.06□□□□□ -1.12
CNOT4-205ENST00000423368 N4BP1O75113 896 aaKnown RBP8.05□□□□□ -1.12
CNOT4-205ENST00000423368 ACTN3Q08043 901 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-205ENST00000423368 JMYQ8N9B5 988 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 CCDC97Q96F63 343 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-205ENST00000423368 KIF9Q9HAQ2 790 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 CLIP2Q9UDT6 1046 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 LGR5O75473 907 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 NAA25Q14CX7 972 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 CCDC144BQ3MJ40 725 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 CCDC144CPQ8IYA2 1237 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-205ENST00000423368 KDM5BQ9UGL1 1544 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 URI1O94763 535 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-205ENST00000423368 ERLIN2O94905 339 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 SKILP12757 684 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 ZRSR1Q15695 479 aaKnown RBP8.05□□□□□ -1.12
CNOT4-205ENST00000423368 CCDC30Q5VVM6 783 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 NFXL1Q6ZNB6 911 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 OTUD6BQ8N6M0 293 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 CCDC102AQ96A19 550 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 ZCWPW1Q9H0M4 648 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 ARGLU1Q9NWB6 273 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-205ENST00000423368 USP16Q9Y5T5 823 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 PTPRKQ15262 1439 aa8.05□□□□□ -1.12
CNOT4-205ENST00000423368 TPD52L2O43399 206 aaKnown RBP8.04□□□□□ -1.12
CNOT4-205ENST00000423368 HNRNPH1P31943 449 aaKnown RBP8.04□□□□□ -1.12
CNOT4-205ENST00000423368 RDXP35241 583 aaKnown RBP8.04□□□□□ -1.12
CNOT4-205ENST00000423368 NBPF10Q6P3W6 841 aaKnown RBP8.04□□□□□ -1.12
CNOT4-205ENST00000423368 KCTD17Q8N5Z5 321 aa8.04□□□□□ -1.12
CNOT4-205ENST00000423368 MIEF2Q96C03 454 aa8.04□□□□□ -1.12
CNOT4-205ENST00000423368 RBM28Q9NW13 759 aaKnown RBP8.04□□□□□ -1.12
CNOT4-205ENST00000423368 SPDYE2BA6NHP3 402 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms