RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TFCP2L1Q9NZI6 479 aa35.3■■■■□ 3.24
CDK9-202ENST00000421939 VIRMAQ69YN4 1812 aaKnown RBP35.29■■■■□ 3.24
CDK9-202ENST00000421939 C4BP0C0L5 1744 aa35.28■■■■□ 3.24
CDK9-202ENST00000421939 RNMTO43148 476 aaKnown RBP35.27■■■■□ 3.24
CDK9-202ENST00000421939 NFATC2IPQ8NCF5 419 aa35.27■■■■□ 3.24
CDK9-202ENST00000421939 PNPLA7Q6ZV29 1317 aa35.27■■■■□ 3.24
CDK9-202ENST00000421939 MAP3K5Q99683 1374 aa35.26■■■■□ 3.24
CDK9-202ENST00000421939 LGR6Q9HBX8 967 aa35.26■■■■□ 3.24
CDK9-202ENST00000421939 FCHSD2O94868 740 aa35.25■■■■□ 3.23
CDK9-202ENST00000421939 MTFR1LQ9H019 292 aa35.25■■■■□ 3.23
CDK9-202ENST00000421939 SLC52A2Q9HAB3 445 aa35.25■■■■□ 3.23
CDK9-202ENST00000421939 PHACTR3Q96KR7 559 aa35.24■■■■□ 3.23
CDK9-202ENST00000421939 MYBBP1AQ9BQG0 1328 aaKnown RBP35.24■■■■□ 3.23
CDK9-202ENST00000421939 ZNF831Q5JPB2 1677 aa35.24■■■■□ 3.23
CDK9-202ENST00000421939 ATP6V1AP38606 617 aa35.22■■■■□ 3.23
CDK9-202ENST00000421939 GNAT3A8MTJ3 354 aa35.21■■■■□ 3.23
CDK9-202ENST00000421939 ITPK1Q13572 414 aa35.21■■■■□ 3.23
CDK9-202ENST00000421939 LINC00116Q8NCU8 138 aa35.21■■■■□ 3.23
CDK9-202ENST00000421939 ATF5Q9Y2D1 282 aaPredicted RBP35.21■■■■□ 3.23
CDK9-202ENST00000421939 RBM42Q9BTD8 480 aaKnown RBP35.2■■■■□ 3.23
CDK9-202ENST00000421939 AK7Q96M32 723 aa35.19■■■■□ 3.22
CDK9-202ENST00000421939 SLC4A9Q96Q91 983 aa35.18■■■■□ 3.22
CDK9-202ENST00000421939 PPP1R1BQ9UD71 204 aaPredicted RBP35.18■■■■□ 3.22
CDK9-202ENST00000421939 PTGER2P43116 358 aa35.17■■■■□ 3.22
CDK9-202ENST00000421939 SLC16A10Q8TF71 515 aa35.17■■■■□ 3.22
CDK9-202ENST00000421939 ZNF316A6NFI3 1004 aaPredicted RBP35.16■■■■□ 3.22
CDK9-202ENST00000421939 UBR3Q6ZT12 1888 aa35.16■■■■□ 3.22
CDK9-202ENST00000421939 PTCD1O75127 700 aaKnown RBP35.15■■■■□ 3.22
CDK9-202ENST00000421939 COL23A1Q86Y22 540 aaPredicted RBP35.14■■■■□ 3.22
CDK9-202ENST00000421939 PRKRIP1Q9H875 184 aaPredicted RBP35.14■■■■□ 3.22
CDK9-202ENST00000421939 COL5A3P25940 1745 aaPredicted RBP35.14■■■■□ 3.22
CDK9-202ENST00000421939 FLAD1Q8NFF5 587 aa35.13■■■■□ 3.21
CDK9-202ENST00000421939 IL17REQ8NFR9 667 aa35.13■■■■□ 3.21
CDK9-202ENST00000421939 CICQ96RK0 1608 aaPredicted RBP35.13■■■■□ 3.21
CDK9-202ENST00000421939 SGIP1Q9BQI5 828 aa35.12■■■■□ 3.21
CDK9-202ENST00000421939 CEMIPQ8WUJ3 1361 aa35.12■■■■□ 3.21
CDK9-202ENST00000421939 MSH5O43196 834 aa35.11■■■■□ 3.21
CDK9-202ENST00000421939 TEFQ10587 303 aa35.11■■■■□ 3.21
CDK9-202ENST00000421939 SIPA1L3O60292 1781 aaPredicted RBP35.1■■■■□ 3.21
CDK9-202ENST00000421939 NEFMP07197 916 aa35.1■■■■□ 3.21
CDK9-202ENST00000421939 AMIGO3Q86WK7 504 aa35.1■■■■□ 3.21
CDK9-202ENST00000421939 TJP1Q07157 1748 aa35.09■■■■□ 3.21
CDK9-202ENST00000421939 COL24A1Q17RW2 1714 aa35.09■■■■□ 3.21
CDK9-202ENST00000421939 GNPATO15228 680 aa35.09■■■■□ 3.21
CDK9-202ENST00000421939 KCPQ6ZWJ8 1503 aa35.09■■■■□ 3.21
CDK9-202ENST00000421939 SLC39A6Q13433 755 aa35.08■■■■□ 3.21
CDK9-202ENST00000421939 PHF14O94880 888 aa35.07■■■■□ 3.2
CDK9-202ENST00000421939 SSFA2P28290 1259 aa35.07■■■■□ 3.2
CDK9-202ENST00000421939 PLEKHF1Q96S99 279 aa35.07■■■■□ 3.2
CDK9-202ENST00000421939 CNTNAP4Q9C0A0 1308 aa35.06■■■■□ 3.2
CDK9-202ENST00000421939 UBR2Q8IWV8 1755 aa35.06■■■■□ 3.2
CDK9-202ENST00000421939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.06■■■■□ 3.2
CDK9-202ENST00000421939 RTF1Q92541 710 aaKnown RBP35.05■■■■□ 3.2
CDK9-202ENST00000421939 PNNQ9H307 717 aaKnown RBP35.05■■■■□ 3.2
CDK9-202ENST00000421939 RC3H1Q5TC82 1133 aaKnown RBP35.04■■■■□ 3.2
CDK9-202ENST00000421939 SMIM5Q71RC9 77 aa35.03■■■■□ 3.2
CDK9-202ENST00000421939 MAPK8IP3Q9UPT6 1336 aa35.03■■■■□ 3.2
CDK9-202ENST00000421939 HTATSF1O43719 755 aaKnown RBP35.01■■■■□ 3.2
CDK9-202ENST00000421939 POLD1P28340 1107 aa35.01■■■■□ 3.2
CDK9-202ENST00000421939 TTC5Q8N0Z6 440 aa35.01■■■■□ 3.2
CDK9-202ENST00000421939 ARXQ96QS3 562 aa35.01■■■■□ 3.2
CDK9-202ENST00000421939 MCM10Q7L590 875 aa35■■■■□ 3.19
CDK9-202ENST00000421939 RTCBQ9Y3I0 505 aaKnown RBP35■■■■□ 3.19
CDK9-202ENST00000421939 MSL1Q68DK7 614 aa34.99■■■■□ 3.19
CDK9-202ENST00000421939 MYH14Q7Z406 1995 aaKnown RBP34.99■■■■□ 3.19
CDK9-202ENST00000421939 DLG5Q8TDM6 1919 aa34.98■■■■□ 3.19
CDK9-202ENST00000421939 CRKLP46109 303 aaKnown RBP34.98■■■■□ 3.19
CDK9-202ENST00000421939 DNAJC10Q8IXB1 793 aa34.98■■■■□ 3.19
CDK9-202ENST00000421939 NFE2L2Q16236 605 aa34.97■■■■□ 3.19
CDK9-202ENST00000421939 ZNF790Q6PG37 636 aa34.97■■■■□ 3.19
CDK9-202ENST00000421939 DCTN1Q14203 1278 aa34.96■■■■□ 3.19
CDK9-202ENST00000421939 WDR43Q15061 677 aaKnown RBP eCLIP34.96■■■■□ 3.19
CDK9-202ENST00000421939 VSIG10Q8N0Z9 540 aa34.96■■■■□ 3.19
CDK9-202ENST00000421939 ADRA2BP18089 450 aa34.95■■■■□ 3.19
CDK9-202ENST00000421939 RPS6KA4O75676 772 aa34.94■■■■□ 3.18
CDK9-202ENST00000421939 FHDC1Q9C0D6 1143 aaPredicted RBP34.94■■■■□ 3.18
CDK9-202ENST00000421939 BTBD11A6QL63 1104 aa34.93■■■■□ 3.18
CDK9-202ENST00000421939 TRAPPC3LQ5T215 181 aa34.92■■■■□ 3.18
CDK9-202ENST00000421939 ZNF496Q96IT1 587 aaPredicted RBP34.92■■■■□ 3.18
CDK9-202ENST00000421939 HEG1Q9ULI3 1381 aa34.91■■■■□ 3.18
CDK9-202ENST00000421939 C4AP0C0L4 1744 aa34.9■■■■□ 3.18
CDK9-202ENST00000421939 CYP19A1P11511 503 aaPredicted RBP34.9■■■■□ 3.18
CDK9-202ENST00000421939 INTS5Q6P9B9 1019 aaKnown RBP34.9■■■■□ 3.18
CDK9-202ENST00000421939 CCDC87Q9NVE4 849 aa34.9■■■■□ 3.18
CDK9-202ENST00000421939 ARHGEF1Q92888 912 aaKnown RBP34.88■■■■□ 3.17
CDK9-202ENST00000421939 FMNL2Q96PY5 1086 aa34.88■■■■□ 3.17
CDK9-202ENST00000421939 KCNQ3O43525 872 aa34.87■■■■□ 3.17
CDK9-202ENST00000421939 SYT17Q9BSW7 474 aa34.87■■■■□ 3.17
CDK9-202ENST00000421939 CCDC146Q8IYE0 955 aa34.86■■■■□ 3.17
CDK9-202ENST00000421939 RFC4P35249 363 aa34.85■■■■□ 3.17
CDK9-202ENST00000421939 ADAMTS8Q9UP79 889 aa34.85■■■■□ 3.17
CDK9-202ENST00000421939 STARD3NLO95772 234 aa34.84■■■■□ 3.17
CDK9-202ENST00000421939 TAF7Q15545 349 aaPredicted RBP34.84■■■■□ 3.17
CDK9-202ENST00000421939 SOS1Q07889 1333 aaPredicted RBP34.83■■■■□ 3.17
CDK9-202ENST00000421939 KLHL34Q8N239 644 aa34.83■■■■□ 3.17
CDK9-202ENST00000421939 TMPOP42166 694 aaKnown RBP34.82■■■■□ 3.16
CDK9-202ENST00000421939 RUNDC1Q96C34 613 aa34.82■■■■□ 3.16
CDK9-202ENST00000421939 THUMPD2Q9BTF0 503 aaKnown RBP34.82■■■■□ 3.16
CDK9-202ENST00000421939 TEX13AQ9BXU3 409 aaPredicted RBP34.82■■■■□ 3.16
CDK9-202ENST00000421939 ZBTB1Q9Y2K1 713 aa34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms