RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 NAP1L3Q99457 506 aaPredicted RBP13.61□□□□□ -0.23
PBX1-203ENST00000420696 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
PBX1-203ENST00000420696 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
PBX1-203ENST00000420696 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 MRPS9P82933 396 aaKnown RBP13.61□□□□□ -0.23
PBX1-203ENST00000420696 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 USP5P45974 858 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 PUS7Q96PZ0 661 aaKnown RBP13.61□□□□□ -0.23
PBX1-203ENST00000420696 FAM114A2Q9NRY5 505 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 ANO10Q9NW15 660 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
PBX1-203ENST00000420696 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
PBX1-203ENST00000420696 MAP3K11Q16584 847 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 LRRC27Q9C0I9 530 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 TRAF1Q13077 416 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 TTC14Q96N46 770 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
PBX1-203ENST00000420696 NOP2P46087 812 aaKnown RBP13.6□□□□□ -0.23
PBX1-203ENST00000420696 CKAP4Q07065 602 aaKnown RBP13.6□□□□□ -0.23
PBX1-203ENST00000420696 PRPF31Q8WWY3 499 aaKnown RBP13.6□□□□□ -0.23
PBX1-203ENST00000420696 PPP1R9BQ96SB3 815 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 EHBP1Q8NDI1 1231 aa13.6□□□□□ -0.23
PBX1-203ENST00000420696 CLIP2Q9UDT6 1046 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 BAG4O95429 457 aaKnown RBP13.59□□□□□ -0.23
PBX1-203ENST00000420696 HSPA4P34932 840 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 IGHMBP2P38935 993 aaKnown RBP13.59□□□□□ -0.23
PBX1-203ENST00000420696 AMPD3Q01432 767 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 MAP7D1Q3KQU3 841 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 RAB3GAP2Q9H2M9 1393 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 TDRD12Q587J7 1177 aaKnown RBP13.59□□□□□ -0.23
PBX1-203ENST00000420696 CRACR2BQ8N4Y2 399 aaPredicted RBP13.59□□□□□ -0.23
PBX1-203ENST00000420696 GOLIM4O00461 696 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 ATP2A1O14983 1001 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
PBX1-203ENST00000420696 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 LMAN1P49257 510 aa13.59□□□□□ -0.23
PBX1-203ENST00000420696 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.23
PBX1-203ENST00000420696 UQCRHLA0A096LP55 91 aa13.58□□□□□ -0.24
PBX1-203ENST00000420696 UQCRHP07919 91 aa13.58□□□□□ -0.24
PBX1-203ENST00000420696 PRPHP41219 470 aa13.58□□□□□ -0.24
PBX1-203ENST00000420696 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.24
PBX1-203ENST00000420696 CTAGE5O15320 804 aa13.58□□□□□ -0.24
PBX1-203ENST00000420696 STMN4Q9H169 189 aaPredicted RBP13.58□□□□□ -0.24
PBX1-203ENST00000420696 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
PBX1-203ENST00000420696 KIAA0753Q2KHM9 967 aa13.58□□□□□ -0.24
PBX1-203ENST00000420696 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
PBX1-203ENST00000420696 PSMD1Q99460 953 aa13.58□□□□□ -0.24
PBX1-203ENST00000420696 CCDC18Q5T9S5 1454 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 GMNNO75496 209 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 RBM10P98175 930 aaKnown RBP13.57□□□□□ -0.24
PBX1-203ENST00000420696 DZIP1Q86YF9 867 aaKnown RBP13.57□□□□□ -0.24
PBX1-203ENST00000420696 UTP14AQ9BVJ6 771 aaKnown RBP13.57□□□□□ -0.24
PBX1-203ENST00000420696 CASQ1P31415 396 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 ARL1P40616 181 aaPredicted RBP13.57□□□□□ -0.24
PBX1-203ENST00000420696 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 KIF3CO14782 793 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 STX6O43752 255 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
PBX1-203ENST00000420696 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
PBX1-203ENST00000420696 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
PBX1-203ENST00000420696 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
PBX1-203ENST00000420696 CUX2O14529 1486 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
PBX1-203ENST00000420696 TPD52P55327 224 aaPredicted RBP13.56□□□□□ -0.24
PBX1-203ENST00000420696 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 TMCO5BA8MYB1 307 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 MXRA7P84157 204 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 UBA5Q9GZZ9 404 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 CCDC7Q96M83 1385 aa13.56□□□□□ -0.24
PBX1-203ENST00000420696 K7ELQ4 463 aaPredicted RBP13.55□□□□□ -0.24
PBX1-203ENST00000420696 SNX16P57768 344 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 CEP83Q9Y592 693 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 VPS8Q8N3P4 1428 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 PEG3Q9GZU2 1588 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 GSDMDP57764 484 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 STK3Q13188 491 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 WDR66Q8TBY9 1149 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 ARID4AP29374 1257 aaPredicted RBP13.55□□□□□ -0.24
PBX1-203ENST00000420696 CABP4P57796 275 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 CCDC82Q8N4S0 544 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 AKAP2Q9Y2D5 859 aa13.55□□□□□ -0.24
PBX1-203ENST00000420696 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 A0A1W2PRG0 241 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
PBX1-203ENST00000420696 MKNK2Q9HBH9 465 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 FAM184BQ9ULE4 1060 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
PBX1-203ENST00000420696 ALDH3A1P30838 453 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 STIM2Q9P246 746 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 WDR78Q5VTH9 848 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms