RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 SLIT3O75094 1523 aa20.07■□□□□ 0.8
CTSB-203ENST00000420692 GNAI2P04899 355 aa20.07■□□□□ 0.8
CTSB-203ENST00000420692 HSCBQ8IWL3 235 aa20.07■□□□□ 0.8
CTSB-203ENST00000420692 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
CTSB-203ENST00000420692 KCNQ3O43525 872 aa20.07■□□□□ 0.8
CTSB-203ENST00000420692 SDSP20132 328 aa20.07■□□□□ 0.8
CTSB-203ENST00000420692 PHAXQ9H814 394 aaKnown RBP20.07■□□□□ 0.8
CTSB-203ENST00000420692 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
CTSB-203ENST00000420692 EIF4A1P60842 406 aaKnown RBP20.06■□□□□ 0.8
CTSB-203ENST00000420692 TRPM3Q9HCF6 1732 aaPredicted RBP20.06■□□□□ 0.8
CTSB-203ENST00000420692 LMO7Q8WWI1 1683 aa20.06■□□□□ 0.8
CTSB-203ENST00000420692 NCAPD2Q15021 1401 aa20.05■□□□□ 0.8
CTSB-203ENST00000420692 PNMA6EA0A0J9YXQ4 647 aa20.05■□□□□ 0.8
CTSB-203ENST00000420692 HMMRO75330 724 aa20.05■□□□□ 0.8
CTSB-203ENST00000420692 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
CTSB-203ENST00000420692 DNAJC5Q9H3Z4 198 aa20.05■□□□□ 0.8
CTSB-203ENST00000420692 HDGFL1Q5TGJ6 251 aa20.04■□□□□ 0.8
CTSB-203ENST00000420692 USP44Q9H0E7 712 aa20.04■□□□□ 0.8
CTSB-203ENST00000420692 CHMP5Q9NZZ3 219 aa20.04■□□□□ 0.8
CTSB-203ENST00000420692 EXOC6BQ9Y2D4 811 aa20.04■□□□□ 0.8
CTSB-203ENST00000420692 AXIN2Q9Y2T1 843 aa20.04■□□□□ 0.8
CTSB-203ENST00000420692 ATP8B2P98198 1209 aa20.03■□□□□ 0.8
CTSB-203ENST00000420692 PXDNQ92626 1479 aa20.03■□□□□ 0.8
CTSB-203ENST00000420692 SALL3Q9BXA9 1300 aa20.03■□□□□ 0.8
CTSB-203ENST00000420692 GNAI3P08754 354 aa20.02■□□□□ 0.8
CTSB-203ENST00000420692 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
CTSB-203ENST00000420692 OSBPL3Q9H4L5 887 aa20.02■□□□□ 0.8
CTSB-203ENST00000420692 PXDNLA1KZ92 1463 aa20.02■□□□□ 0.79
CTSB-203ENST00000420692 AKAP4Q5JQC9 854 aa20.02■□□□□ 0.79
CTSB-203ENST00000420692 ZNF530Q6P9A1 599 aaPredicted RBP20.02■□□□□ 0.79
CTSB-203ENST00000420692 USP26Q9BXU7 913 aa20.02■□□□□ 0.79
CTSB-203ENST00000420692 LRRFIP2Q9Y608 721 aaKnown RBP20.02■□□□□ 0.79
CTSB-203ENST00000420692 PDE1AP54750 535 aa20.01■□□□□ 0.79
CTSB-203ENST00000420692 KRT28Q7Z3Y7 464 aa20.01■□□□□ 0.79
CTSB-203ENST00000420692 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
CTSB-203ENST00000420692 ANKRD24Q8TF21 1146 aa20■□□□□ 0.79
CTSB-203ENST00000420692 C1orf167Q5SNV9 1468 aa20■□□□□ 0.79
CTSB-203ENST00000420692 TUBGCP6Q96RT7 1819 aa20■□□□□ 0.79
CTSB-203ENST00000420692 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
CTSB-203ENST00000420692 MCM4P33991 863 aa20■□□□□ 0.79
CTSB-203ENST00000420692 RGPD5Q99666 1765 aa20■□□□□ 0.79
CTSB-203ENST00000420692 PLEKHO1Q53GL0 409 aaPredicted RBP19.99■□□□□ 0.79
CTSB-203ENST00000420692 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
CTSB-203ENST00000420692 CHPF2Q9P2E5 772 aa19.99■□□□□ 0.79
CTSB-203ENST00000420692 CAMTA1Q9Y6Y1 1673 aa19.99■□□□□ 0.79
CTSB-203ENST00000420692 TSHZ3Q63HK5 1081 aa19.98■□□□□ 0.79
CTSB-203ENST00000420692 IBTKQ9P2D0 1353 aaPredicted RBP19.98■□□□□ 0.79
CTSB-203ENST00000420692 RNMTO43148 476 aaKnown RBP19.98■□□□□ 0.79
CTSB-203ENST00000420692 BTBD11A6QL63 1104 aa19.97■□□□□ 0.79
CTSB-203ENST00000420692 HOXB7P09629 217 aa19.97■□□□□ 0.79
CTSB-203ENST00000420692 ANXA1P04083 346 aa19.96■□□□□ 0.79
CTSB-203ENST00000420692 AMOTQ4VCS5 1084 aa19.96■□□□□ 0.79
CTSB-203ENST00000420692 HSP90AB1P08238 724 aaKnown RBP19.96■□□□□ 0.79
CTSB-203ENST00000420692 TEFQ10587 303 aa19.96■□□□□ 0.79
CTSB-203ENST00000420692 LRRCC1Q9C099 1032 aa19.96■□□□□ 0.79
CTSB-203ENST00000420692 C19orf44Q9H6X5 657 aa19.96■□□□□ 0.79
CTSB-203ENST00000420692 MST1RQ04912 1400 aa19.95■□□□□ 0.78
CTSB-203ENST00000420692 K7ELQ4 463 aaPredicted RBP19.95■□□□□ 0.78
CTSB-203ENST00000420692 ALS2Q96Q42 1657 aa19.95■□□□□ 0.78
CTSB-203ENST00000420692 SSH3Q8TE77 659 aa19.95■□□□□ 0.78
CTSB-203ENST00000420692 HEG1Q9ULI3 1381 aa19.94■□□□□ 0.78
CTSB-203ENST00000420692 UBTFL1P0CB47 393 aaPredicted RBP19.94■□□□□ 0.78
CTSB-203ENST00000420692 BEND3Q5T5X7 828 aa19.94■□□□□ 0.78
CTSB-203ENST00000420692 KIF1AQ12756 1690 aa19.94■□□□□ 0.78
CTSB-203ENST00000420692 PI4KAP2A4QPH2 592 aa19.94■□□□□ 0.78
CTSB-203ENST00000420692 PI4KAP1Q8N8J0 262 aa19.94■□□□□ 0.78
CTSB-203ENST00000420692 SIPA1L3O60292 1781 aaPredicted RBP19.93■□□□□ 0.78
CTSB-203ENST00000420692 ADCY9O60503 1353 aa19.93■□□□□ 0.78
CTSB-203ENST00000420692 NBPF7P0C2Y1 421 aaPredicted RBP19.93■□□□□ 0.78
CTSB-203ENST00000420692 DDX17Q92841 729 aaKnown RBP19.93■□□□□ 0.78
CTSB-203ENST00000420692 SRCIN1Q9C0H9 1055 aa19.93■□□□□ 0.78
CTSB-203ENST00000420692 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
CTSB-203ENST00000420692 FOXD4L1Q9NU39 408 aa19.92■□□□□ 0.78
CTSB-203ENST00000420692 PRAMEF22A3QJZ6 481 aa19.92■□□□□ 0.78
CTSB-203ENST00000420692 ZC3H6P61129 1189 aaKnown RBP19.92■□□□□ 0.78
CTSB-203ENST00000420692 POLA2Q14181 598 aa19.92■□□□□ 0.78
CTSB-203ENST00000420692 IL27Q8NEV9 243 aa19.92■□□□□ 0.78
CTSB-203ENST00000420692 STAP2Q9UGK3 403 aa19.92■□□□□ 0.78
CTSB-203ENST00000420692 OVOS2A0A0G2JMS6 1433 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
CTSB-203ENST00000420692 MX1P20591 662 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 RABEP1Q15276 862 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 PROSER3Q2NL68 480 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 C1orf141Q5JVX7 400 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 PPP1R42Q7Z4L9 355 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 DNAAF4Q8WXU2 420 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 BRPF3Q9ULD4 1205 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 CIZ1Q9ULV3 898 aaPredicted RBP19.91■□□□□ 0.78
CTSB-203ENST00000420692 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 TNPO1Q92973 898 aaKnown RBP19.91■□□□□ 0.78
CTSB-203ENST00000420692 ERBB3P21860 1342 aa19.91■□□□□ 0.78
CTSB-203ENST00000420692 EIF5BO60841 1220 aaKnown RBP19.9■□□□□ 0.78
CTSB-203ENST00000420692 ERC2O15083 957 aa19.9■□□□□ 0.78
CTSB-203ENST00000420692 RAB3GAP1Q15042 981 aa19.9■□□□□ 0.78
CTSB-203ENST00000420692 CASC1Q6TDU7 716 aa19.88■□□□□ 0.77
CTSB-203ENST00000420692 UNC5CLQ8IV45 518 aa19.88■□□□□ 0.77
CTSB-203ENST00000420692 IL1RAPL2Q9NP60 686 aa19.88■□□□□ 0.77
CTSB-203ENST00000420692 TMEM94Q12767 1356 aa19.88■□□□□ 0.77
CTSB-203ENST00000420692 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
CTSB-203ENST00000420692 COL18A1P39060 1754 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms