RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
HMGN1-205ENST00000419378 HOXA2O43364 376 aa10.04□□□□□ -0.8
HMGN1-205ENST00000419378 CFHP08603 1231 aa10.04□□□□□ -0.8
HMGN1-205ENST00000419378 PCDHB15Q9Y5E8 787 aa10.04□□□□□ -0.8
HMGN1-205ENST00000419378 NHSL1Q5SYE7 1610 aa10.04□□□□□ -0.8
HMGN1-205ENST00000419378 PLEKHH1Q9ULM0 1364 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 GJA5P36382 358 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-205ENST00000419378 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 BRINP3Q76B58 766 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 LRCH3Q96II8 777 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 STAC3Q96MF2 364 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 C1orf167Q5SNV9 1468 aa10.03□□□□□ -0.8
HMGN1-205ENST00000419378 DLC1Q96QB1 1528 aa10.02□□□□□ -0.8
HMGN1-205ENST00000419378 RFC5P40937 340 aa10.02□□□□□ -0.81
HMGN1-205ENST00000419378 GUCA2AQ02747 115 aa10.02□□□□□ -0.81
HMGN1-205ENST00000419378 QPCTQ16769 361 aa10.02□□□□□ -0.81
HMGN1-205ENST00000419378 CDAN1Q8IWY9 1227 aa10.02□□□□□ -0.81
HMGN1-205ENST00000419378 HLA-CQ95604 372 aa10.02□□□□□ -0.81
HMGN1-205ENST00000419378 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
HMGN1-205ENST00000419378 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-205ENST00000419378 GOLGA8CPA6NN73 597 aa10.01□□□□□ -0.81
HMGN1-205ENST00000419378 FDX1P10109 184 aa10.01□□□□□ -0.81
HMGN1-205ENST00000419378 FUT2Q10981 343 aa10.01□□□□□ -0.81
HMGN1-205ENST00000419378 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
HMGN1-205ENST00000419378 JCADQ9P266 1359 aa10.01□□□□□ -0.81
HMGN1-205ENST00000419378 FMN2Q9NZ56 1722 aa10□□□□□ -0.81
HMGN1-205ENST00000419378 KIAA1210Q9ULL0 1709 aa10□□□□□ -0.81
HMGN1-205ENST00000419378 MCM6Q14566 821 aa10□□□□□ -0.81
HMGN1-205ENST00000419378 SIRT1Q96EB6 747 aa10□□□□□ -0.81
HMGN1-205ENST00000419378 SHPRHQ149N8 1683 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 LILRB3O75022 631 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 PRAM1Q96QH2 718 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 PCDHGC3Q9UN70 934 aa9.99□□□□□ -0.81
HMGN1-205ENST00000419378 ADGRB2O60241 1585 aa9.98□□□□□ -0.81
HMGN1-205ENST00000419378 NUTM2BA6NNL0 878 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-205ENST00000419378 NUTM2EB1AL46 878 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-205ENST00000419378 KMT5BQ4FZB7 885 aa9.98□□□□□ -0.81
HMGN1-205ENST00000419378 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-205ENST00000419378 NUTM2AQ8IVF1 878 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-205ENST00000419378 ORAI2Q96SN7 254 aa9.98□□□□□ -0.81
HMGN1-205ENST00000419378 SIN3AQ96ST3 1273 aa9.98□□□□□ -0.81
HMGN1-205ENST00000419378 ARHGEF28Q8N1W1 1705 aaKnown RBP9.98□□□□□ -0.81
HMGN1-205ENST00000419378 BCAMP50895 628 aa9.97□□□□□ -0.81
HMGN1-205ENST00000419378 GRIPAP1Q4V328 841 aa9.97□□□□□ -0.81
HMGN1-205ENST00000419378 ILDR2Q71H61 639 aa9.97□□□□□ -0.81
HMGN1-205ENST00000419378 DDX17Q92841 729 aaKnown RBP9.97□□□□□ -0.81
HMGN1-205ENST00000419378 TRAK1Q9UPV9 953 aa9.97□□□□□ -0.81
HMGN1-205ENST00000419378 LRP6O75581 1613 aa9.96□□□□□ -0.81
HMGN1-205ENST00000419378 SOWAHBA6NEL2 793 aa9.96□□□□□ -0.82
HMGN1-205ENST00000419378 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
HMGN1-205ENST00000419378 SAFB2Q14151 953 aaKnown RBP eCLIP9.96□□□□□ -0.82
HMGN1-205ENST00000419378 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
HMGN1-205ENST00000419378 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
HMGN1-205ENST00000419378 NECTIN2Q92692 538 aa9.96□□□□□ -0.82
HMGN1-205ENST00000419378 ZBTB3Q9H5J0 574 aa9.96□□□□□ -0.82
HMGN1-205ENST00000419378 POGKQ9P215 609 aa9.96□□□□□ -0.82
HMGN1-205ENST00000419378 NEUROD1Q13562 356 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 ESCO1Q5FWF5 840 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 BANK1Q8NDB2 785 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 WNT2BQ93097 391 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 L3MBTL2Q969R5 705 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 SNRKQ9NRH2 765 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 SPATA31A6Q5VVP1 1343 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 KIF1AQ12756 1690 aa9.95□□□□□ -0.82
HMGN1-205ENST00000419378 USP32Q8NFA0 1604 aa9.94□□□□□ -0.82
HMGN1-205ENST00000419378 PXDNQ92626 1479 aa9.94□□□□□ -0.82
HMGN1-205ENST00000419378 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-205ENST00000419378 PPP4CP60510 307 aa9.94□□□□□ -0.82
HMGN1-205ENST00000419378 RGPD8O14715 1765 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-205ENST00000419378 TRPM1Q7Z4N2 1603 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 ANKARQ7Z5J8 1434 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 PNPLA6Q8IY17 1366 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 NPHP3Q7Z494 1330 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 ACTN4O43707 911 aaKnown RBP9.93□□□□□ -0.82
HMGN1-205ENST00000419378 AP1G2O75843 785 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 NBPF1Q3BBV0 1214 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 PUS10Q3MIT2 529 aaKnown RBP9.93□□□□□ -0.82
HMGN1-205ENST00000419378 LRRC59Q96AG4 307 aaKnown RBP9.93□□□□□ -0.82
HMGN1-205ENST00000419378 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
HMGN1-205ENST00000419378 HIRIP3Q9BW71 556 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-205ENST00000419378 RGS17Q9UGC6 210 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-205ENST00000419378 TSR3Q9UJK0 312 aaKnown RBP9.92□□□□□ -0.82
HMGN1-205ENST00000419378 COL22A1Q8NFW1 1626 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-205ENST00000419378 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
HMGN1-205ENST00000419378 EIF3AQ14152 1382 aaKnown RBP9.91□□□□□ -0.82
HMGN1-205ENST00000419378 C6orf229H3BNL8 230 aa9.91□□□□□ -0.82
HMGN1-205ENST00000419378 FOXO3O43524 673 aa9.91□□□□□ -0.82
HMGN1-205ENST00000419378 MTMR2Q13614 643 aa9.91□□□□□ -0.82
HMGN1-205ENST00000419378 MORN1Q5T089 497 aa9.91□□□□□ -0.82
HMGN1-205ENST00000419378 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
HMGN1-205ENST00000419378 TONSLQ96HA7 1378 aa9.9□□□□□ -0.82
HMGN1-205ENST00000419378 APLP1P51693 650 aa9.9□□□□□ -0.82
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