RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 TCP11L2Q8N4U5 519 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 NBPF4Q96M43 638 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 NUDCQ9Y266 331 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 VIRMAQ69YN4 1812 aaKnown RBP9.08□□□□□ -0.96
CPS1-202ENST00000417946 ADAMTS7Q9UKP4 1686 aa9.07□□□□□ -0.96
CPS1-202ENST00000417946 MEGF6O75095 1541 aa9.07□□□□□ -0.96
CPS1-202ENST00000417946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.07□□□□□ -0.96
CPS1-202ENST00000417946 FAM83GA6ND36 823 aa9.07□□□□□ -0.96
CPS1-202ENST00000417946 SULT6B1Q6IMI4 303 aa9.07□□□□□ -0.96
CPS1-202ENST00000417946 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
CPS1-202ENST00000417946 LTV1Q96GA3 475 aaPredicted RBP9.07□□□□□ -0.96
CPS1-202ENST00000417946 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
CPS1-202ENST00000417946 SLIT2O94813 1529 aa9.06□□□□□ -0.96
CPS1-202ENST00000417946 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
CPS1-202ENST00000417946 HSPA1LP34931 641 aa9.06□□□□□ -0.96
CPS1-202ENST00000417946 USHBP1Q8N6Y0 703 aa9.06□□□□□ -0.96
CPS1-202ENST00000417946 RRP7AQ9Y3A4 280 aaKnown RBP9.06□□□□□ -0.96
CPS1-202ENST00000417946 JCADQ9P266 1359 aa9.06□□□□□ -0.96
CPS1-202ENST00000417946 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
CPS1-202ENST00000417946 TMPOP42166 694 aaKnown RBP9.05□□□□□ -0.96
CPS1-202ENST00000417946 PRDM11Q9NQV5 511 aa9.05□□□□□ -0.96
CPS1-202ENST00000417946 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
CPS1-202ENST00000417946 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
CPS1-202ENST00000417946 CDCA7LQ96GN5 454 aa9.04□□□□□ -0.96
CPS1-202ENST00000417946 DISP2A7MBM2 1401 aa9.04□□□□□ -0.96
CPS1-202ENST00000417946 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
CPS1-202ENST00000417946 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
CPS1-202ENST00000417946 NFE2L2Q16236 605 aa9.03□□□□□ -0.96
CPS1-202ENST00000417946 WWC1Q8IX03 1113 aa9.03□□□□□ -0.96
CPS1-202ENST00000417946 TRMT2AQ8IZ69 625 aaKnown RBP9.03□□□□□ -0.96
CPS1-202ENST00000417946 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
CPS1-202ENST00000417946 SIPA1L3O60292 1781 aaPredicted RBP9.03□□□□□ -0.96
CPS1-202ENST00000417946 SPATA31A6Q5VVP1 1343 aa9.03□□□□□ -0.96
CPS1-202ENST00000417946 PLEKHG2Q9H7P9 1386 aa9.02□□□□□ -0.97
CPS1-202ENST00000417946 MTHFSDQ2M296 383 aaKnown RBP9.02□□□□□ -0.97
CPS1-202ENST00000417946 NGEFQ8N5V2 710 aa9.02□□□□□ -0.97
CPS1-202ENST00000417946 OVOS2A0A0G2JMS6 1433 aa9.02□□□□□ -0.97
CPS1-202ENST00000417946 MAPK8IP3Q9UPT6 1336 aa9.02□□□□□ -0.97
CPS1-202ENST00000417946 BCL9LQ86UU0 1499 aa9.02□□□□□ -0.97
CPS1-202ENST00000417946 SCN11AQ9UI33 1791 aa9.01□□□□□ -0.97
CPS1-202ENST00000417946 CRB1P82279 1406 aa9.01□□□□□ -0.97
CPS1-202ENST00000417946 LARP1Q6PKG0 1096 aaKnown RBP9.01□□□□□ -0.97
CPS1-202ENST00000417946 MICALL2Q8IY33 904 aa9.01□□□□□ -0.97
CPS1-202ENST00000417946 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
CPS1-202ENST00000417946 TOGARAM1Q9Y4F4 1720 aa9.01□□□□□ -0.97
CPS1-202ENST00000417946 KDM3BQ7LBC6 1761 aa9□□□□□ -0.97
CPS1-202ENST00000417946 ECM2O94769 699 aaPredicted RBP9□□□□□ -0.97
CPS1-202ENST00000417946 ADAMTS2O95450 1211 aa9□□□□□ -0.97
CPS1-202ENST00000417946 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
CPS1-202ENST00000417946 RIPK4P57078 832 aa9□□□□□ -0.97
CPS1-202ENST00000417946 SLFN5Q08AF3 891 aa9□□□□□ -0.97
CPS1-202ENST00000417946 PDE3BQ13370 1112 aa9□□□□□ -0.97
CPS1-202ENST00000417946 NEUROD2Q15784 382 aa9□□□□□ -0.97
CPS1-202ENST00000417946 DUSP27Q5VZP5 1158 aa9□□□□□ -0.97
CPS1-202ENST00000417946 RNF25Q96BH1 459 aaPredicted RBP9□□□□□ -0.97
CPS1-202ENST00000417946 THUMPD2Q9BTF0 503 aaKnown RBP9□□□□□ -0.97
CPS1-202ENST00000417946 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
CPS1-202ENST00000417946 BTG4Q9NY30 223 aa9□□□□□ -0.97
CPS1-202ENST00000417946 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
CPS1-202ENST00000417946 NUTM2BA6NNL0 878 aaPredicted RBP8.99□□□□□ -0.97
CPS1-202ENST00000417946 NUTM2EB1AL46 878 aaPredicted RBP8.99□□□□□ -0.97
CPS1-202ENST00000417946 HAP1P54257 671 aaPredicted RBP8.99□□□□□ -0.97
CPS1-202ENST00000417946 NUTM2AQ8IVF1 878 aaPredicted RBP8.99□□□□□ -0.97
CPS1-202ENST00000417946 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 PNNQ9H307 717 aaKnown RBP8.99□□□□□ -0.97
CPS1-202ENST00000417946 ZSWIM6Q9HCJ5 1215 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 STK24Q9Y6E0 443 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 MRC1P22897 1456 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 THSD7AQ9UPZ6 1657 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 GLI3P10071 1580 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 MAP3K5Q99683 1374 aa8.99□□□□□ -0.97
CPS1-202ENST00000417946 ZNF853P0CG23 659 aa8.98□□□□□ -0.97
CPS1-202ENST00000417946 HOXB1P14653 301 aaPredicted RBP8.98□□□□□ -0.97
CPS1-202ENST00000417946 PLCB2Q00722 1185 aa8.98□□□□□ -0.97
CPS1-202ENST00000417946 WDR63Q8IWG1 891 aa8.98□□□□□ -0.97
CPS1-202ENST00000417946 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
CPS1-202ENST00000417946 IL16Q14005 1332 aa8.98□□□□□ -0.97
CPS1-202ENST00000417946 STK25O00506 426 aa8.97□□□□□ -0.97
CPS1-202ENST00000417946 CSB-PGBD3P0DP91 1061 aa8.97□□□□□ -0.97
CPS1-202ENST00000417946 DCTN1Q14203 1278 aa8.97□□□□□ -0.97
CPS1-202ENST00000417946 SPNS2Q8IVW8 549 aa8.97□□□□□ -0.97
CPS1-202ENST00000417946 GAS2L2Q8NHY3 880 aa8.97□□□□□ -0.97
CPS1-202ENST00000417946 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
CPS1-202ENST00000417946 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 CYP27B1O15528 508 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 HOXB3P14651 431 aaPredicted RBP8.96□□□□□ -0.98
CPS1-202ENST00000417946 TOM1L2Q6ZVM7 507 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 MCM10Q7L590 875 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 FNBP4Q8N3X1 1017 aaPredicted RBP8.96□□□□□ -0.98
CPS1-202ENST00000417946 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 SPATA31A1Q5TZJ5 1347 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 SPATA31A5Q5VU36 1347 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 SPATA31A7Q8IWB4 1347 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 FANCIQ9NVI1 1328 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 ATRNO75882 1429 aa8.96□□□□□ -0.98
CPS1-202ENST00000417946 E9PSI1 815 aa8.95□□□□□ -0.98
CPS1-202ENST00000417946 MMRN1Q13201 1228 aa8.95□□□□□ -0.98
CPS1-202ENST00000417946 ZNF530Q6P9A1 599 aaPredicted RBP8.95□□□□□ -0.98
CPS1-202ENST00000417946 TSR2Q969E8 191 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms